##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727442.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5586217 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.470768858424226 31.0 30.0 31.0 28.0 34.0 2 30.846294191579023 31.0 31.0 33.0 28.0 34.0 3 31.0019453236421 31.0 31.0 34.0 28.0 34.0 4 34.823628763436865 35.0 35.0 37.0 32.0 37.0 5 34.462190065298216 35.0 35.0 37.0 30.0 37.0 6 34.56030655450728 35.0 35.0 37.0 30.0 37.0 7 34.482845546458364 35.0 35.0 37.0 30.0 37.0 8 34.36635472628436 35.0 35.0 37.0 30.0 37.0 9 35.792799134011446 37.0 35.0 39.0 30.0 39.0 10 35.44512305912928 37.0 35.0 39.0 30.0 39.0 11 35.52212472232998 37.0 35.0 39.0 30.0 39.0 12 35.324036463316766 37.0 34.0 39.0 30.0 39.0 13 35.36081394618218 37.0 34.0 39.0 30.0 39.0 14 36.146159198613304 38.0 34.0 40.0 29.0 41.0 15 36.11362251054694 38.0 34.0 40.0 29.0 41.0 16 35.97118998420577 38.0 34.0 40.0 29.0 41.0 17 36.30405711056338 38.0 35.0 40.0 30.0 41.0 18 36.30233429886451 38.0 35.0 40.0 30.0 41.0 19 36.27095796672417 38.0 35.0 40.0 29.0 41.0 20 36.26524730421321 38.0 34.0 40.0 29.0 41.0 21 36.17438617225217 38.0 34.0 40.0 29.0 41.0 22 36.033892883144354 38.0 34.0 40.0 29.0 41.0 23 35.79193772816201 38.0 34.0 40.0 27.0 41.0 24 35.55889021138993 38.0 34.0 40.0 27.0 41.0 25 35.58468405362699 38.0 34.0 40.0 27.0 41.0 26 35.049707700220026 38.0 33.0 40.0 25.0 41.0 27 34.84844466299823 38.0 33.0 40.0 25.0 41.0 28 34.55173510087417 38.0 33.0 40.0 24.0 41.0 29 34.34945724450017 38.0 33.0 40.0 24.0 41.0 30 34.18997256998788 37.0 32.0 40.0 24.0 41.0 31 34.011599441983726 37.0 32.0 40.0 23.0 41.0 32 33.87400346245053 37.0 32.0 40.0 22.0 41.0 33 33.71298125368205 37.0 31.0 40.0 21.0 41.0 34 33.635841393200444 37.0 31.0 40.0 21.0 41.0 35 33.30249612573232 37.0 31.0 40.0 19.0 40.0 36 33.092573739974654 37.0 30.0 39.0 18.0 40.0 37 32.96482789694708 37.0 30.0 39.0 18.0 40.0 38 32.78107921693697 37.0 30.0 39.0 16.0 40.0 39 32.768768739202216 37.0 30.0 39.0 16.0 40.0 40 32.561124639447414 36.0 30.0 39.0 15.0 40.0 41 32.334299222532884 36.0 30.0 39.0 15.0 40.0 42 32.11933191997375 36.0 30.0 39.0 15.0 40.0 43 31.827217596452126 36.0 29.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 18.0 10 35.0 11 64.0 12 70.0 13 120.0 14 257.0 15 613.0 16 1008.0 17 1849.0 18 3361.0 19 6289.0 20 11657.0 21 19712.0 22 31578.0 23 46877.0 24 65084.0 25 86029.0 26 110109.0 27 138091.0 28 169803.0 29 202733.0 30 241439.0 31 282516.0 32 329375.0 33 379415.0 34 439919.0 35 512761.0 36 604249.0 37 723905.0 38 860977.0 39 316302.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.56655908640857 26.50147675967475 15.315122917709784 23.616841236206902 2 23.9718936804639 24.170972950030407 28.566076111973455 23.291057257532245 3 21.50575246181808 25.138890952499697 28.790145459798644 24.565211125883582 4 17.705022916223985 17.479163448179687 32.378280328171996 32.437533307424324 5 13.679758591547733 39.576049408750144 33.34567919577775 13.398512803924373 6 35.251423279833205 39.13430144228196 12.72496217028447 12.889313107600367 7 29.61123780189706 31.428567848330992 20.092846375284022 18.86734797448792 8 28.366620917160933 35.093946404158665 17.747681481045223 18.79175119763518 9 27.652720973782436 13.121062071165513 16.830316473563414 42.39590048148864 10 16.13288563620067 28.090870798610222 33.089351881604316 22.686891683584793 11 39.43203423712326 21.353413231172365 19.111591977182414 20.10296055452196 12 21.774628518727432 26.107954631909212 28.209645275147743 23.90777157421561 13 31.186418286292856 19.320123081505784 23.67960285108867 25.813855781112693 14 22.87728887008865 20.324684844860126 22.96359056585163 33.8344357191996 15 25.838111910081548 28.4102282456983 19.973230542243524 25.778429301976637 16 26.188474239364496 26.2563555980729 22.11285383292486 25.442316329637748 17 25.094764489098793 26.723809690887414 23.034676239752233 25.146749580261563 18 25.907872895020013 24.553503739650644 24.20271178151511 25.335911583814237 19 26.060534347305165 25.310241259872292 23.74834346750225 24.8808809253203 20 25.848100780904144 24.513100726305474 23.569922185264197 26.068876307526185 21 26.527540910064896 25.488895257738825 22.833699442753478 25.1498643894428 22 26.21278407193992 25.150276117093195 23.225861079152494 25.411078731814392 23 25.204105032081642 24.174230968829175 23.900288871699757 26.72137512738943 24 25.77347066896972 25.191968016996118 23.40870395833173 25.625857355702436 25 25.951856148803387 24.567359270146504 23.438348349160083 26.042436231890026 26 26.279985184965067 25.032897934326577 23.24727091697297 25.439845963735387 27 26.515260685361845 24.580391345341578 23.13368778907085 25.770660180225725 28 25.934939512732857 24.68883682821487 23.93111474187272 25.44510891717955 29 25.874952584190698 24.66112576722315 23.801241519976756 25.6626801286094 30 25.681082564461782 25.219911793616323 23.65414734157302 25.444858300348876 31 26.577145141336256 24.662665270611576 23.185905595862103 25.57428399219006 32 25.521421742119937 24.69988186996674 23.212954312372755 26.565742075540566 33 25.512900769877 24.434174325845202 23.772903916908348 26.28002098736945 34 26.12181016240508 24.396921924085657 24.15479026324971 25.32647765025956 35 26.660654249557435 24.555132749050028 23.66041276233988 25.123800239052652 36 25.815252074883592 24.89332226084307 23.63569120211406 25.655734462159273 37 26.169337854222274 24.28743817148528 23.870501271253875 25.67272270303857 38 25.566282154810672 23.882745693552543 24.6732090787021 25.87776307293469 39 26.245346358725413 23.853763647205255 23.78607920172095 26.11481079234838 40 25.808789740892628 24.40438672539932 24.329326984612308 25.457496549095747 41 25.377370768088674 24.194978462168585 24.628814097268332 25.798836672474412 42 26.353666533183368 24.15375199352263 24.513870477999692 24.97871099529431 43 25.751881819127327 23.65570474616364 24.736991062108757 25.85542237260028 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 108.0 1 116.0 2 124.0 3 134.5 4 145.0 5 145.0 6 204.5 7 264.0 8 378.0 9 492.0 10 837.0 11 1182.0 12 1182.0 13 2946.0 14 4710.0 15 7907.0 16 11104.0 17 9665.5 18 8227.0 19 8227.0 20 11388.0 21 14549.0 22 16366.0 23 18183.0 24 24211.0 25 30239.0 26 30239.0 27 38057.0 28 45875.0 29 54872.5 30 63870.0 31 77226.5 32 90583.0 33 90583.0 34 112638.5 35 134694.0 36 166527.5 37 198361.0 38 230985.5 39 263610.0 40 263610.0 41 287845.5 42 312081.0 43 334824.5 44 357568.0 45 394212.5 46 430857.0 47 430857.0 48 472941.0 49 515025.0 50 524854.0 51 534683.0 52 510018.5 53 485354.0 54 485354.0 55 468181.5 56 451009.0 57 435256.0 58 419503.0 59 393302.5 60 367102.0 61 367102.0 62 314117.0 63 261132.0 64 225528.0 65 189924.0 66 161984.5 67 134045.0 68 134045.0 69 108466.0 70 82887.0 71 72931.0 72 62975.0 73 50112.5 74 37250.0 75 37250.0 76 29104.0 77 20958.0 78 17969.5 79 14981.0 80 11267.5 81 7554.0 82 7554.0 83 6282.5 84 5011.0 85 4254.0 86 3497.0 87 3463.0 88 3429.0 89 3429.0 90 2371.5 91 1314.0 92 1077.0 93 840.0 94 758.5 95 677.0 96 677.0 97 397.5 98 118.0 99 120.5 100 123.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5586217.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.31206220438939 #Duplication Level Percentage of deduplicated Percentage of total 1 84.51476531410201 48.43715486871185 2 8.170394704616116 9.36524339090745 3 2.7299822744231017 4.693827417858516 4 1.3436724250235317 3.080345504210855 5 0.7919411279868641 2.2693889594698735 6 0.5025718062066037 1.7282055971691122 7 0.32947746268598643 1.3218122985482548 8 0.23576301324962975 1.080965158468565 9 0.19389840230392477 1.000144556475683 >10 1.0716719495108424 11.163697339177235 >50 0.06660084164052213 2.6197379652417823 >100 0.038106221096689895 4.413136798092197 >500 0.005530103347362027 2.2475291776886075 >1k 0.005435827981004299 5.869241490307675 >5k 1.5710485494023962E-4 0.5245912355422659 >10k+ 3.142097098804792E-5 0.18497824213003863 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 10272 0.1838811489063171 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGG 6337 0.11343991828459224 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACT 6171 0.11046831872088034 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 5641 0.1009806815596315 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.370360657310663E-5 2 0.0 0.0 0.0 0.0 5.370360657310663E-5 3 0.0 0.0 0.0 0.0 5.370360657310663E-5 4 0.0 1.7901202191035545E-5 0.0 1.7901202191035545E-5 5.370360657310663E-5 5 0.0 1.7901202191035545E-5 0.0 1.7901202191035545E-5 5.370360657310663E-5 6 0.0 1.7901202191035545E-5 0.0 1.7901202191035545E-5 7.160480876414218E-5 7 0.0 1.7901202191035545E-5 0.0 1.7901202191035545E-5 7.160480876414218E-5 8 0.0 1.7901202191035545E-5 0.0 1.7901202191035545E-5 7.160480876414218E-5 9 0.0 3.580240438207109E-5 0.0 7.160480876414218E-5 7.160480876414218E-5 10 0.0 5.370360657310663E-5 0.0 8.950601095517772E-5 7.160480876414218E-5 11 0.0 5.370360657310663E-5 0.0 8.950601095517772E-5 7.160480876414218E-5 12 0.0 5.370360657310663E-5 0.0 1.253084153372488E-4 8.950601095517772E-5 13 0.0 5.370360657310663E-5 0.0 1.4320961752828436E-4 1.0740721314621325E-4 14 0.0 7.160480876414218E-5 0.0 1.4320961752828436E-4 1.7901202191035543E-4 15 0.0 8.950601095517772E-5 0.0 1.4320961752828436E-4 2.3271562848346206E-4 16 0.0 8.950601095517772E-5 0.0 1.7901202191035543E-4 2.506168306744976E-4 17 0.0 8.950601095517772E-5 0.0 2.148144262924265E-4 2.6851803286553314E-4 18 0.0 8.950601095517772E-5 0.0 2.3271562848346206E-4 2.864192350565687E-4 19 0.0 8.950601095517772E-5 0.0 2.864192350565687E-4 3.0432043724760424E-4 20 0.0 8.950601095517772E-5 0.0 3.4012284162967534E-4 3.4012284162967534E-4 21 1.7901202191035545E-5 8.950601095517772E-5 0.0 4.8333245915795965E-4 4.29628852584853E-4 22 1.7901202191035545E-5 8.950601095517772E-5 0.0 7.876528964055639E-4 5.012336613489952E-4 23 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.001020368524889026 5.907396723041729E-4 24 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.001449997377473879 5.907396723041729E-4 25 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.0017006142081483766 5.907396723041729E-4 26 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.0021302430607332296 6.265420766862441E-4 27 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.00494073180472581 6.265420766862441E-4 28 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.00887899628675363 6.265420766862441E-4 29 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.014607380987885003 6.265420766862441E-4 30 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.024220326564471092 6.265420766862441E-4 31 1.7901202191035545E-5 8.950601095517772E-5 0.0 0.05622767608204264 6.265420766862441E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 2430 0.0 20.022635 5 TTAGAGT 1030 0.0 19.757282 4 AGGTTAT 1335 0.0 19.123594 1 GGTTATC 1335 0.0 18.985018 2 CAAGACG 2560 0.0 18.861328 4 TTATCTA 1360 0.0 18.63603 4 ATTAGAG 1105 0.0 18.41629 3 TAACGAA 870 0.0 18.287357 13 TAGAGTG 1195 0.0 17.958158 5 CGAACGA 910 0.0 17.28022 16 CGAACGT 745 0.0 17.13423 4 ACGAACG 930 0.0 17.107527 15 GTTATCT 1525 0.0 17.104918 3 AATTAGA 1115 0.0 17.089685 2 TCGAACG 770 0.0 16.818184 3 ATACCGT 1930 0.0 16.678757 6 AAATTAG 1105 0.0 16.574661 1 ACCGTCG 1745 0.0 16.538683 8 GCGCAAG 2820 0.0 16.531916 1 TACCGTC 1780 0.0 16.317417 7 >>END_MODULE