##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727441.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2650922 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.882185141622426 31.0 31.0 33.0 30.0 34.0 2 31.219780136873133 31.0 31.0 34.0 30.0 34.0 3 31.390051838567864 31.0 31.0 34.0 30.0 34.0 4 35.200060205468134 35.0 35.0 37.0 33.0 37.0 5 34.873291632118935 35.0 35.0 37.0 32.0 37.0 6 34.85785964279598 35.0 35.0 37.0 32.0 37.0 7 34.72983437460627 35.0 35.0 37.0 32.0 37.0 8 34.6326285722477 35.0 35.0 37.0 30.0 37.0 9 36.04828131495382 37.0 35.0 39.0 30.0 39.0 10 35.78222558038298 37.0 35.0 39.0 30.0 39.0 11 35.82053979709701 37.0 35.0 39.0 30.0 39.0 12 35.67608590520581 37.0 35.0 39.0 30.0 39.0 13 35.67406245826923 37.0 35.0 39.0 30.0 39.0 14 36.43607469401212 38.0 35.0 40.0 30.0 41.0 15 36.41213283529278 38.0 35.0 40.0 30.0 41.0 16 36.31894978426374 38.0 35.0 40.0 30.0 41.0 17 36.761851914164204 38.0 36.0 40.0 31.0 41.0 18 36.78039980052223 38.0 36.0 40.0 31.0 41.0 19 36.7980657295839 39.0 36.0 40.0 30.0 41.0 20 36.85052823130971 39.0 36.0 40.0 31.0 41.0 21 36.83555117804296 39.0 36.0 40.0 30.0 41.0 22 36.70772998979223 39.0 35.0 40.0 30.0 41.0 23 36.512938517240414 38.0 35.0 40.0 30.0 41.0 24 36.336416914567835 38.0 35.0 40.0 30.0 41.0 25 36.33923102980774 38.0 35.0 40.0 30.0 41.0 26 35.85414357721578 38.0 34.0 40.0 27.0 41.0 27 35.65722793805325 38.0 34.0 40.0 27.0 41.0 28 35.44259054019696 38.0 34.0 40.0 26.0 41.0 29 35.27095214419738 38.0 34.0 40.0 26.0 41.0 30 35.10823630419907 38.0 34.0 40.0 25.0 41.0 31 34.90267197601438 38.0 33.0 40.0 25.0 41.0 32 34.79620109531702 38.0 33.0 40.0 25.0 41.0 33 34.65024018058622 38.0 33.0 40.0 24.0 41.0 34 34.58563322496852 38.0 33.0 40.0 24.0 41.0 35 34.30454913422575 38.0 33.0 40.0 23.0 41.0 36 34.10758634165773 37.0 32.0 40.0 23.0 41.0 37 33.95791351084642 37.0 32.0 40.0 22.0 41.0 38 33.80874390117853 37.0 32.0 40.0 21.0 41.0 39 33.781817043277776 37.0 32.0 40.0 21.0 41.0 40 33.60149525334959 37.0 31.0 40.0 20.0 41.0 41 33.40420050080689 37.0 31.0 40.0 19.0 41.0 42 33.194833344775894 37.0 31.0 40.0 18.0 41.0 43 32.89919054577992 37.0 30.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 11.0 12 12.0 13 20.0 14 24.0 15 72.0 16 159.0 17 342.0 18 680.0 19 1415.0 20 2870.0 21 5434.0 22 9688.0 23 15049.0 24 21919.0 25 30783.0 26 40467.0 27 52334.0 28 66781.0 29 82837.0 30 101152.0 31 122396.0 32 144157.0 33 170604.0 34 200975.0 35 234151.0 36 277453.0 37 330639.0 38 417738.0 39 320754.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.817416732744306 23.586548378262357 14.845099176814708 24.75093571217863 2 21.133477333546594 23.892781454905123 30.131327892710537 24.842413318837746 3 19.46168163378628 24.679111644929574 30.58543404898371 25.27377267230043 4 15.87342064383637 16.953120461484723 32.441693871038076 34.73176502364083 5 13.275758396512611 39.705393067015926 33.22349733413507 13.795351202336395 6 34.68080162298249 37.87369073854304 13.187147716907551 14.258359921566912 7 28.422790259388997 31.797917856504267 19.792359035837343 19.986932848269394 8 28.796735626321713 34.56152236844389 17.879364236292126 18.76237776894228 9 27.235882459008604 13.332832878523018 17.932666445862985 41.498618216605394 10 16.83150239803359 29.173170693064527 32.108262710106146 21.887064198795738 11 37.79775489433488 22.21302626029736 19.056615019227273 20.93260382614049 12 21.451366732027573 26.942550554109097 28.0251550215359 23.580927692327425 13 31.816930109599607 20.073657391654677 23.26307601657084 24.84633648217488 14 22.809271642092828 20.831846429280077 24.134093722863213 32.22478820576388 15 25.962287837967317 28.498952439943537 20.62799282664673 24.910766895442414 16 24.98477888070641 26.091412723573153 23.26322690746842 25.66058148825201 17 24.19003652314176 26.553817879213344 24.503776421939236 24.75236917570566 18 24.221949947980363 25.436810287137835 25.52225225789367 24.818987506988137 19 24.720757532662223 25.67774532785197 25.94572756195769 23.655769577528122 20 25.048115334966475 25.02849951828081 25.464913716812493 24.458471429940225 21 25.0924772588556 25.47894657028762 25.368117206013608 24.060458964843175 22 25.786726278630606 25.081235886985738 24.946980710862107 24.185057123521553 23 24.927666675971604 25.00548865639955 24.96478583677679 25.10205883085206 24 24.85256073170014 25.630327863286812 24.937738643385206 24.57937276162784 25 25.04381494438539 25.10647238960633 24.894395233054762 24.955317432953517 26 25.273923563198014 25.2320136163946 24.91223808169384 24.58182473871355 27 25.14525135028492 25.23978449762007 24.786131014039643 24.828833138055366 28 24.65312068782107 25.699586785276974 25.13736730088626 24.509925226015703 29 24.834453823990295 25.33858031281192 25.186972683466358 24.63999317973143 30 24.73313058626395 25.748626326991136 25.111451789226543 24.406791297518375 31 25.07320094668949 25.048832066729993 25.280600485416016 24.5973665011645 32 24.456132621027706 25.615842337118934 25.0311023862641 24.89692265558926 33 24.362542541802437 25.394296776744092 25.159321926484445 25.083838754969022 34 24.566169808089413 25.301159370211572 25.62493351369825 24.507737308000763 35 24.7923929862893 25.239595883998096 25.38588460920389 24.582126520508712 36 24.52829619279632 25.110999116533794 25.36159117469318 24.999113515976706 37 24.336702475591512 25.153361736029957 25.649604175452918 24.860331612925616 38 24.272611566843537 25.013900823939743 25.671747414673085 25.04174019454363 39 24.28441877957933 24.62562082173674 26.23713560791302 24.852824790770907 40 24.117533446853585 24.763836883921897 26.50817338269478 24.610456286529743 41 24.050952838295505 24.378536976946133 26.679736333245565 24.890773851512797 42 23.76388290564566 24.891716919622684 26.471620062755523 24.872780111976134 43 23.94057614671424 24.259521781478295 26.557439260755316 25.242462811052153 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 168.0 1 238.0 2 308.0 3 338.0 4 368.0 5 368.0 6 487.0 7 606.0 8 805.0 9 1004.0 10 1550.0 11 2096.0 12 2096.0 13 6386.5 14 10677.0 15 20713.0 16 30749.0 17 21830.5 18 12912.0 19 12912.0 20 14989.5 21 17067.0 22 14265.0 23 11463.0 24 15002.5 25 18542.0 26 18542.0 27 22877.0 28 27212.0 29 30957.5 30 34703.0 31 41499.5 32 48296.0 33 48296.0 34 57894.0 35 67492.0 36 80128.5 37 92765.0 38 107399.0 39 122033.0 40 122033.0 41 137083.0 42 152133.0 43 165644.0 44 179155.0 45 195023.5 46 210892.0 47 210892.0 48 227587.0 49 244282.0 50 243907.5 51 243533.0 52 237980.0 53 232427.0 54 232427.0 55 224233.0 56 216039.0 57 203810.5 58 191582.0 59 174331.5 60 157081.0 61 157081.0 62 135042.5 63 113004.0 64 95892.0 65 78780.0 66 64642.5 67 50505.0 68 50505.0 69 41244.5 70 31984.0 71 25980.5 72 19977.0 73 16253.0 74 12529.0 75 12529.0 76 9951.5 77 7374.0 78 6053.0 79 4732.0 80 3706.5 81 2681.0 82 2681.0 83 2098.0 84 1515.0 85 1213.0 86 911.0 87 783.0 88 655.0 89 655.0 90 488.0 91 321.0 92 249.0 93 177.0 94 146.5 95 116.0 96 116.0 97 76.0 98 36.0 99 38.0 100 40.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2650922.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.190178407493775 #Duplication Level Percentage of deduplicated Percentage of total 1 83.45103884165836 50.22932916170109 2 9.333716123815556 11.235960773947193 3 2.9825930756392034 5.385684280190377 4 1.3085597289336528 3.1504977416551303 5 0.7311355295596853 2.200358898212745 6 0.45862848951661384 1.6562958364058629 7 0.3249806160770604 1.3692448882458856 8 0.22491953452120683 1.0830357528129517 9 0.16013264372724187 0.8674571155325694 >10 0.8819065936679928 9.671578636275234 >50 0.07646549930494169 3.228681715428909 >100 0.06193386308874423 6.972780723653542 >500 0.0032928880232613897 1.2602058942823329 >1k 5.065981574209857E-4 0.48974338491763764 >5k 1.2664953935524642E-4 0.4740779999693033 >10k+ 6.332476967762321E-5 0.72506719676926 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19023 0.7175993861758286 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7246 0.2733388609698814 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5192 0.19585638506149938 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3886 0.14659050700096043 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 3.7722724395512205E-5 0.0 9 0.0 3.7722724395512205E-5 0.0 7.544544879102441E-5 0.0 10 0.0 3.7722724395512205E-5 0.0 7.544544879102441E-5 0.0 11 0.0 3.7722724395512205E-5 0.0 1.131681731865366E-4 3.7722724395512205E-5 12 0.0 3.7722724395512205E-5 0.0 1.131681731865366E-4 7.544544879102441E-5 13 0.0 3.7722724395512205E-5 0.0 1.131681731865366E-4 7.544544879102441E-5 14 0.0 3.7722724395512205E-5 0.0 1.5089089758204882E-4 7.544544879102441E-5 15 0.0 3.7722724395512205E-5 0.0 1.8861362197756103E-4 7.544544879102441E-5 16 7.544544879102441E-5 3.7722724395512205E-5 0.0 2.263363463730732E-4 1.131681731865366E-4 17 7.544544879102441E-5 3.7722724395512205E-5 0.0 3.395045195596098E-4 1.131681731865366E-4 18 7.544544879102441E-5 3.7722724395512205E-5 0.0 4.903954171416586E-4 1.5089089758204882E-4 19 7.544544879102441E-5 3.7722724395512205E-5 0.0 6.412863147237074E-4 1.5089089758204882E-4 20 7.544544879102441E-5 3.7722724395512205E-5 0.0 7.544544879102441E-4 2.263363463730732E-4 21 7.544544879102441E-5 3.7722724395512205E-5 0.0 0.0012825726294474148 2.640590707685854E-4 22 7.544544879102441E-5 3.7722724395512205E-5 0.0 0.00188613621977561 2.640590707685854E-4 23 1.5089089758204882E-4 3.7722724395512205E-5 0.0 0.003130986124827513 2.640590707685854E-4 24 1.5089089758204882E-4 3.7722724395512205E-5 0.0 0.004677617825043513 2.640590707685854E-4 25 1.5089089758204882E-4 3.7722724395512205E-5 0.0 0.004941676895812099 2.640590707685854E-4 26 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.0069409812887742455 3.0178179516409764E-4 27 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.012863449018869662 3.395045195596098E-4 28 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.02123789383467337 3.395045195596098E-4 29 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.03342233381442381 3.395045195596098E-4 30 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.06118625896952079 3.395045195596098E-4 31 1.5089089758204882E-4 7.544544879102441E-5 0.0 0.14459120260799826 3.395045195596098E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 360 0.0 16.958334 5 CTAGTAC 405 0.0 16.444445 3 TACCGAC 350 0.0 16.385714 7 TTAGAGT 185 1.8189894E-11 16.0 4 GTACTAG 340 0.0 15.779412 1 TATCGGC 145 5.3536496E-8 15.310345 37 TATACCG 380 0.0 15.092106 5 TCTTATA 940 0.0 14.957447 37 CGTCATT 330 0.0 14.575757 26 ACGGACC 445 0.0 14.550563 8 CGCCGGA 395 0.0 14.518987 14 ATTAGGC 210 1.364242E-10 14.095238 3 TAGTACT 450 0.0 13.9777775 4 TGCGACG 280 0.0 13.875001 22 CGCGCTA 175 3.5714038E-8 13.742857 24 TTATACC 525 0.0 13.742857 4 ATAGTCG 230 4.0017767E-11 13.673912 30 GAGTACT 5490 0.0 13.512751 11 ATACCGA 425 0.0 13.494117 6 TTAGACT 220 2.8558134E-10 13.454545 4 >>END_MODULE