##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727440.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10333270 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.953331036545062 31.0 31.0 33.0 30.0 34.0 2 31.286763531776487 31.0 31.0 34.0 30.0 34.0 3 31.48140743443266 31.0 31.0 34.0 30.0 34.0 4 35.248251231217225 35.0 35.0 37.0 33.0 37.0 5 34.934509695382005 35.0 35.0 37.0 32.0 37.0 6 34.912351075700144 35.0 35.0 37.0 32.0 37.0 7 34.816123743984235 35.0 35.0 37.0 32.0 37.0 8 34.69974064357169 35.0 35.0 37.0 31.0 37.0 9 36.17370803240407 38.0 35.0 39.0 32.0 39.0 10 35.90204698028794 37.0 35.0 39.0 30.0 39.0 11 35.93887859312686 37.0 35.0 39.0 30.0 39.0 12 35.80510593452024 37.0 35.0 39.0 30.0 39.0 13 35.80103607086624 37.0 35.0 39.0 30.0 39.0 14 36.650293566315405 38.0 35.0 40.0 30.0 41.0 15 36.607184269839074 38.0 35.0 40.0 30.0 41.0 16 36.530033184074355 38.0 35.0 40.0 30.0 41.0 17 36.93152680613204 38.0 36.0 40.0 31.0 41.0 18 36.93621273807807 38.0 36.0 40.0 31.0 41.0 19 36.95839845470021 39.0 36.0 40.0 31.0 41.0 20 37.021198129924024 39.0 36.0 40.0 31.0 41.0 21 36.9984279903651 39.0 36.0 40.0 31.0 41.0 22 36.88723482498764 39.0 36.0 40.0 31.0 41.0 23 36.71853343617267 39.0 36.0 40.0 30.0 41.0 24 36.571568535420056 39.0 35.0 40.0 30.0 41.0 25 36.59237492100758 39.0 35.0 40.0 30.0 41.0 26 36.155053821297614 38.0 35.0 40.0 29.0 41.0 27 36.00302392175952 38.0 35.0 40.0 27.0 41.0 28 35.81812824014083 38.0 34.0 40.0 27.0 41.0 29 35.68519152214159 38.0 34.0 40.0 27.0 41.0 30 35.56814174022357 38.0 34.0 40.0 27.0 41.0 31 35.4121624616409 38.0 34.0 40.0 26.0 41.0 32 35.33483950385502 38.0 34.0 40.0 26.0 41.0 33 35.23784581260337 38.0 34.0 40.0 25.0 41.0 34 35.18401609558252 38.0 34.0 40.0 25.0 41.0 35 34.93657090156359 38.0 33.0 40.0 25.0 41.0 36 34.77184666615699 38.0 33.0 40.0 24.0 41.0 37 34.683969837234486 38.0 33.0 40.0 24.0 41.0 38 34.57302499595965 38.0 33.0 40.0 24.0 41.0 39 34.580285234006276 38.0 33.0 40.0 24.0 41.0 40 34.46013604599512 38.0 33.0 40.0 24.0 41.0 41 34.31659329524923 38.0 33.0 40.0 23.0 41.0 42 34.163802842662584 38.0 33.0 40.0 23.0 41.0 43 33.90069513329275 37.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 14.0 11 20.0 12 21.0 13 40.0 14 119.0 15 249.0 16 508.0 17 1038.0 18 2096.0 19 4387.0 20 8474.0 21 15983.0 22 28257.0 23 45324.0 24 68398.0 25 95567.0 26 131893.0 27 173499.0 28 225805.0 29 287048.0 30 360118.0 31 441156.0 32 532337.0 33 632841.0 34 752412.0 35 899314.0 36 1081893.0 37 1317051.0 38 1783460.0 39 1443941.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.61671765085012 22.390424328407175 13.499705320774547 26.49315269996816 2 20.291456625056732 23.015144286368205 31.243420524190306 25.44997856438475 3 19.360018658178873 24.58224743958108 29.637655843697107 26.42007805854294 4 15.33505850519729 16.817077265957437 33.486069753330746 34.36179447551453 5 12.986905403613763 38.98922606299845 34.61317666140534 13.410691871982442 6 34.98954348429877 38.23270852305224 13.568376709405639 13.209371283243348 7 29.334866891119653 31.09124217212944 20.293024376601018 19.280866560149885 8 27.83071573664484 35.881661855346856 18.212618077336604 18.075004330671703 9 27.601107877757958 13.462059928754403 17.06719170214269 41.869640491344946 10 15.515320900353904 28.557233092718953 34.09375734883536 21.833688658091777 11 38.05464291555335 21.714142764100814 19.77435022988851 20.456864090457326 12 21.48595749457819 25.837880941850933 29.47667098604798 23.199490577522894 13 31.401695687812282 20.119100729972217 23.3745464891559 25.1046570930596 14 22.487895893555475 20.431605871132756 24.156564185393396 32.923934049918365 15 25.332919782411565 28.293366959345878 20.920695965555918 25.45301729268663 16 25.124999153220617 26.476033240203726 23.336697870083718 25.06226973649193 17 24.4054979691811 26.616492165597144 24.284016579456456 24.693993285765302 18 24.76790986783467 25.741009380380074 25.00233711109842 24.48874364068683 19 25.175293009860383 26.074804974611133 24.780132523392886 23.969769492135597 20 25.180576913213336 25.457420545480762 24.675286719499248 24.686715821806647 21 25.0484309419961 25.69301876366339 24.641589738775817 24.616960555564695 22 25.193806026553066 25.598421409679606 24.18906115876194 25.018711405005384 23 24.83306833170913 25.25730964157522 24.37903006502298 25.530591961692668 24 24.879471841924193 25.886258657714357 24.284268193901834 24.950001306459622 25 25.281096884142194 25.12339269176166 24.132060809404962 25.463449614691186 26 25.306548653040135 25.361632861620762 24.41902708435955 24.912791400979554 27 25.505885358652197 25.33958756521411 24.029469858041068 25.12505721809263 28 24.997111272617477 25.41439447532098 24.63679938683495 24.951694865226592 29 25.198731863195288 25.256651573025767 24.530501961141052 25.01411460263789 30 25.016224292987605 25.696357493803994 24.559040845734216 24.728377367474188 31 25.4749367818706 24.96670463464131 24.308123178819482 25.250235404668608 32 24.59087007307464 25.579308389309485 24.482830701220426 25.34699083639545 33 24.81380047168031 25.26488710737259 24.674889942873843 25.246422478073256 34 25.009643607493075 25.158705811422717 24.89397838244815 24.937672198636058 35 25.01539202982212 25.460797985536036 24.861636248738296 24.662173735903544 36 25.196138298912157 25.183102735145795 24.671386695595878 24.949372270346174 37 24.910023642080386 24.99784676099628 24.978220834256724 25.113908762666608 38 24.819006955203918 25.050347082772443 25.142370227430426 24.988275734593213 39 24.864404007637468 24.676109305186063 25.083056960671694 25.376429726504774 40 24.805652034641504 24.796922948882592 25.536737160647117 24.860687855828793 41 24.634031627935784 24.664235038859918 25.430913931407968 25.270819401796334 42 24.686444852403934 24.872049215785516 25.447907583949707 24.993598347860843 43 24.63619938315751 24.235067892351598 25.65993146409607 25.468801260394823 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 135.0 1 181.0 2 227.0 3 274.0 4 321.0 5 321.0 6 433.5 7 546.0 8 805.5 9 1065.0 10 1616.0 11 2167.0 12 2167.0 13 5013.0 14 7859.0 15 13040.5 16 18222.0 17 17645.0 18 17068.0 19 17068.0 20 23647.0 21 30226.0 22 36002.0 23 41778.0 24 55871.0 25 69964.0 26 69964.0 27 89815.0 28 109666.0 29 132197.0 30 154728.0 31 187135.0 32 219542.0 33 219542.0 34 261253.5 35 302965.0 36 353487.0 37 404009.0 38 460423.0 39 516837.0 40 516837.0 41 567661.0 42 618485.0 43 668985.5 44 719486.0 45 775429.0 46 831372.0 47 831372.0 48 902358.5 49 973345.0 50 994395.0 51 1015445.0 52 955603.0 53 895761.0 54 895761.0 55 857523.0 56 819285.0 57 767917.0 58 716549.0 59 653264.5 60 589980.0 61 589980.0 62 512091.0 63 434202.0 64 369382.0 65 304562.0 66 250532.5 67 196503.0 68 196503.0 69 160162.5 70 123822.0 71 101655.5 72 79489.0 73 63644.5 74 47800.0 75 47800.0 76 37975.0 77 28150.0 78 22919.0 79 17688.0 80 13725.5 81 9763.0 82 9763.0 83 7841.0 84 5919.0 85 4724.5 86 3530.0 87 3008.5 88 2487.0 89 2487.0 90 1773.5 91 1060.0 92 830.5 93 601.0 94 524.5 95 448.0 96 448.0 97 282.0 98 116.0 99 106.5 100 97.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.033327E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.59953588033484 #Duplication Level Percentage of deduplicated Percentage of total 1 84.69348839791274 55.558535309895994 2 8.651205923430338 11.350301867644676 3 2.735380505268777 5.383190748052429 4 1.2545146668508818 3.29182319601963 5 0.693419463932678 2.274399750218713 6 0.4488685220436575 1.766734003041347 7 0.28399295098270805 1.3040864044426632 8 0.21508127921553633 1.1287385674470314 9 0.15536417433330968 0.9172635955826892 >10 0.7920088743339098 9.23546590820551 >50 0.04893183799856886 2.2070164957399245 >100 0.02515603560026538 3.0458026523587796 >500 0.0015264863232584682 0.6775111533221979 >1k 9.56287999978893E-4 1.1701869150373796 >5k 5.9767870485116706E-5 0.28968421213918816 >10k+ 4.4825902863837525E-5 0.39925922085218757 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 16843 0.1629977732121584 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 13366 0.12934917988207023 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 10524 0.1018457855064273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.9032436005252934E-5 2 0.0 3.8709914673670584E-5 0.0 2.9032436005252934E-5 2.9032436005252934E-5 3 0.0 3.8709914673670584E-5 0.0 2.9032436005252934E-5 2.9032436005252934E-5 4 0.0 8.709730801575881E-5 0.0 3.8709914673670584E-5 2.9032436005252934E-5 5 0.0 9.677478668417645E-5 0.0 3.8709914673670584E-5 2.9032436005252934E-5 6 1.9354957336835292E-5 9.677478668417645E-5 0.0 3.8709914673670584E-5 2.9032436005252934E-5 7 1.9354957336835292E-5 9.677478668417645E-5 0.0 3.8709914673670584E-5 2.9032436005252934E-5 8 1.9354957336835292E-5 9.677478668417645E-5 0.0 3.8709914673670584E-5 4.8387393342088226E-5 9 1.9354957336835292E-5 1.5483965869468233E-4 0.0 4.8387393342088226E-5 9.677478668417645E-5 10 1.9354957336835292E-5 1.5483965869468233E-4 0.0 8.709730801575881E-5 9.677478668417645E-5 11 1.9354957336835292E-5 1.5483965869468233E-4 0.0 1.1612974402101174E-4 9.677478668417645E-5 12 2.9032436005252934E-5 1.6451713736309996E-4 0.0 1.3548470135784702E-4 1.1612974402101174E-4 13 2.9032436005252934E-5 1.6451713736309996E-4 0.0 1.4516218002626468E-4 1.4516218002626468E-4 14 2.9032436005252934E-5 2.129045307051882E-4 0.0 1.4516218002626468E-4 1.5483965869468233E-4 15 2.9032436005252934E-5 2.2258200937360585E-4 0.0 1.7419461603151762E-4 1.6451713736309996E-4 16 8.709730801575881E-5 2.2258200937360585E-4 0.0 2.3225948804202347E-4 1.6451713736309996E-4 17 8.709730801575881E-5 2.2258200937360585E-4 0.0 2.6129192404727644E-4 1.6451713736309996E-4 18 8.709730801575881E-5 2.2258200937360585E-4 0.0 2.7096940271569404E-4 1.8387209469993525E-4 19 8.709730801575881E-5 2.516144453788588E-4 0.0 3.1935679605778227E-4 1.8387209469993525E-4 20 8.709730801575881E-5 2.806468813841117E-4 0.0 4.064541040735411E-4 2.2258200937360585E-4 21 9.677478668417645E-5 2.806468813841117E-4 0.0 5.032288907577176E-4 2.2258200937360585E-4 22 9.677478668417645E-5 3.387117533946176E-4 0.0 7.064559427944881E-4 2.2258200937360585E-4 23 1.064522653525941E-4 3.387117533946176E-4 0.0 9.871028241785998E-4 2.7096940271569404E-4 24 1.1612974402101174E-4 3.7742166806828815E-4 0.0 0.001470976757599482 2.7096940271569404E-4 25 1.1612974402101174E-4 4.064541040735411E-4 0.0 0.0018096885109940997 2.7096940271569404E-4 26 1.1612974402101174E-4 4.064541040735411E-4 0.0 0.0024774345391149174 2.806468813841117E-4 27 1.1612974402101174E-4 4.064541040735411E-4 0.0 0.00534196822496654 2.806468813841117E-4 28 1.1612974402101174E-4 4.064541040735411E-4 0.0 0.009677478668417646 2.806468813841117E-4 29 1.1612974402101174E-4 4.064541040735411E-4 0.0 0.015725902836178675 2.806468813841117E-4 30 1.1612974402101174E-4 4.258090614103764E-4 0.0 0.02527757428190689 2.806468813841117E-4 31 1.1612974402101174E-4 4.258090614103764E-4 0.0 0.06265199689933583 2.9032436005252936E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 1840 0.0 13.875 5 TCTACAC 2335 0.0 12.438972 3 TAAGACT 1780 0.0 12.160113 4 TCGAACG 475 0.0 12.073684 3 TTACACT 2025 0.0 12.059259 4 GATAACG 615 0.0 12.03252 11 TTAGACT 1430 0.0 12.031468 4 TAGTACT 1325 0.0 12.007547 4 TATACAG 2540 0.0 11.872047 5 GTACTAG 1030 0.0 11.854368 1 CGAACGA 570 0.0 11.68421 16 TTATACT 1930 0.0 11.598446 4 CGAACGT 495 0.0 11.585858 4 CGTATAC 465 0.0 11.537634 3 TACACTG 4420 0.0 11.510181 5 CCGATAA 565 0.0 11.460177 9 CTAGGAC 2035 0.0 11.272727 3 TCTATAC 1185 0.0 11.084389 3 TAATACT 1720 0.0 11.078488 4 TAGAGTG 1700 0.0 10.991177 5 >>END_MODULE