##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727438.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6165816 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.755294189771476 31.0 31.0 31.0 30.0 34.0 2 31.119275372473002 31.0 31.0 34.0 28.0 34.0 3 31.302806473628145 31.0 31.0 34.0 28.0 34.0 4 35.10839733135079 35.0 35.0 37.0 33.0 37.0 5 34.783085482927156 35.0 35.0 37.0 32.0 37.0 6 34.77742459392236 35.0 35.0 37.0 32.0 37.0 7 34.6866051468289 35.0 35.0 37.0 31.0 37.0 8 34.57284664349374 35.0 35.0 37.0 30.0 37.0 9 35.994912757695005 37.0 35.0 39.0 30.0 39.0 10 35.71166346838764 37.0 35.0 39.0 30.0 39.0 11 35.77432670712198 37.0 35.0 39.0 30.0 39.0 12 35.62253349759383 37.0 35.0 39.0 30.0 39.0 13 35.63724233742946 37.0 35.0 39.0 30.0 39.0 14 36.44254612852541 38.0 35.0 40.0 30.0 41.0 15 36.408809799059846 38.0 35.0 40.0 30.0 41.0 16 36.33531620145655 38.0 35.0 40.0 30.0 41.0 17 36.718125386810115 38.0 36.0 40.0 31.0 41.0 18 36.72795247214643 38.0 36.0 40.0 31.0 41.0 19 36.75041567896285 39.0 36.0 40.0 30.0 41.0 20 36.798451981051656 39.0 36.0 40.0 30.0 41.0 21 36.769048411434916 39.0 36.0 40.0 30.0 41.0 22 36.637561840963144 39.0 35.0 40.0 30.0 41.0 23 36.4513663722693 38.0 35.0 40.0 30.0 41.0 24 36.2844204238336 38.0 35.0 40.0 29.0 41.0 25 36.30398636611926 38.0 35.0 40.0 30.0 41.0 26 35.8429996937956 38.0 34.0 40.0 27.0 41.0 27 35.66756954797224 38.0 34.0 40.0 27.0 41.0 28 35.4763324108277 38.0 34.0 40.0 27.0 41.0 29 35.319010979244275 38.0 34.0 40.0 26.0 41.0 30 35.18930324875085 38.0 34.0 40.0 25.0 41.0 31 35.00894512583574 38.0 34.0 40.0 25.0 41.0 32 34.935266637862696 38.0 33.0 40.0 25.0 41.0 33 34.797364858114484 38.0 33.0 40.0 25.0 41.0 34 34.74915145051361 38.0 33.0 40.0 24.0 41.0 35 34.46920861731845 38.0 33.0 40.0 24.0 41.0 36 34.28974477992856 38.0 33.0 40.0 24.0 41.0 37 34.185084828999116 38.0 33.0 40.0 23.0 41.0 38 34.058828061038476 37.0 32.0 40.0 23.0 41.0 39 34.058905098692534 37.0 32.0 40.0 23.0 41.0 40 33.903327961781535 37.0 32.0 40.0 22.0 41.0 41 33.73888711567131 37.0 32.0 40.0 21.0 41.0 42 33.57173730127529 37.0 31.0 40.0 20.0 41.0 43 33.30813845239624 37.0 31.0 40.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 12.0 11 23.0 12 19.0 13 37.0 14 86.0 15 155.0 16 329.0 17 701.0 18 1546.0 19 3382.0 20 6551.0 21 12024.0 22 20889.0 23 32865.0 24 48648.0 25 67430.0 26 90589.0 27 118124.0 28 151668.0 29 189224.0 30 232748.0 31 281408.0 32 336323.0 33 395517.0 34 465396.0 35 548833.0 36 652810.0 37 785947.0 38 1032076.0 39 690452.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.8784491785029 25.478120008770937 15.220272547867145 24.423158264859023 2 20.593413750913097 24.370383417215173 31.332219449947907 23.70398338192382 3 19.072966173495935 25.87263388982091 30.72136761784653 24.33303231883663 4 15.56592022856342 18.061437448019856 34.216038882769126 32.156603440647594 5 12.525284568984867 40.086340558978726 34.435263718541066 12.953111153495337 6 33.08997543877404 40.10074254567441 13.720471061737813 13.088810953813738 7 27.853280084906846 32.77934339915431 20.660509492985195 18.706867022953652 8 27.088028575617567 36.50128385277796 18.442830600199553 17.96785697140492 9 26.78120787256707 14.19622317629978 18.531496885408192 40.49107206572496 10 15.548031274368226 29.795602074405075 33.90798557725368 20.748381073973015 11 36.78593392991293 22.98947941359262 20.4821389415448 19.742447714949652 12 20.508185777843515 27.226826100551815 29.69250136559378 22.572486756010886 13 30.39278175021765 21.512967626669365 24.115429328413303 23.978821294699678 14 21.899404717883243 21.899534465511135 24.90397053690866 31.29709027969696 15 24.487691491280312 29.953294097650662 21.536597913398648 24.02241649767038 16 24.21131282542327 27.73467453456282 23.934301639880267 24.11971100013364 17 23.17050979140474 27.83578037359532 25.153329259257816 23.840380575742124 18 23.330018281440772 26.93911073570797 26.03283977335684 23.698031209494413 19 23.887268124770507 26.892190749772617 26.29854669682001 22.921994428636857 20 24.029844549367027 26.58682970753587 25.94021618549759 23.443109557599513 21 24.266536659543522 26.577812247397585 25.86420029400813 23.291450799050768 22 24.399625288850658 26.513360113243728 25.701918448425964 23.385096149479647 23 24.107595815379508 26.35784136276528 25.53418720247247 24.000375619382737 24 23.934058363077977 26.71378776142525 25.490900150118005 23.861253725378766 25 24.028044301030064 26.375957375309284 25.739399294432395 23.85659902922825 26 24.21381046726013 26.442469253055883 25.646094531526725 23.697625748157257 27 24.229315308792867 26.57829880100217 25.476254886620037 23.716131003584927 28 24.016415669880516 26.539569134077308 25.75055759043085 23.693457605611325 29 23.96317048708557 26.547564831645964 25.712655064633783 23.776609616634683 30 23.972885340723757 26.711338774948846 25.647975872131116 23.667800012196277 31 24.04445737595802 26.25358914375648 25.90283265021207 23.799120830073424 32 23.758234108834905 26.596722964162407 25.689381583881193 23.955661343121495 33 23.79315243919053 26.366485798473388 25.78781137808848 24.0525503842476 34 24.02126498747287 26.217649050831227 26.260887447825237 23.50019851387067 35 24.034531682424515 26.193548428950848 26.068925832363472 23.70299405626117 36 23.749476143952396 26.201933369403175 26.139378794307195 23.909211692337234 37 23.76751106422897 26.095086197836586 26.291151082030346 23.8462516559041 38 23.43449755879838 25.90962818222276 26.55653363642379 24.09934062255507 39 23.569191815000643 25.839467152441784 26.732763352004017 23.858577680553555 40 23.478936121350362 25.753768844221103 27.001989679873677 23.765305354554854 41 23.259646411764475 25.546821377738162 27.240887499724288 23.952644710773075 42 23.116388812121542 25.692771240659795 27.057505446156682 24.133334501061984 43 23.050185084991185 25.19363211617084 27.243141864758858 24.51304093407912 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 826.0 1 800.0 2 774.0 3 737.5 4 701.0 5 701.0 6 960.0 7 1219.0 8 1760.0 9 2301.0 10 3512.0 11 4723.0 12 4723.0 13 10495.0 14 16267.0 15 25993.0 16 35719.0 17 33247.5 18 30776.0 19 30776.0 20 39365.0 21 47954.0 22 51155.5 23 54357.0 24 69845.5 25 85334.0 26 85334.0 27 103177.0 28 121020.0 29 134269.5 30 147519.0 31 167972.0 32 188425.0 33 188425.0 34 214550.5 35 240676.0 36 269234.0 37 297792.0 38 322288.5 39 346785.0 40 346785.0 41 370845.5 42 394906.0 43 414164.0 44 433422.0 45 453230.0 46 473038.0 47 473038.0 48 488764.0 49 504490.0 50 503045.0 51 501600.0 52 488788.0 53 475976.0 54 475976.0 55 454079.5 56 432183.0 57 404752.5 58 377322.0 59 343152.0 60 308982.0 61 308982.0 62 267096.5 63 225211.0 64 191358.5 65 157506.0 66 128778.0 67 100050.0 68 100050.0 69 80733.5 70 61417.0 71 50152.0 72 38887.0 73 31467.0 74 24047.0 75 24047.0 76 18959.0 77 13871.0 78 11202.5 79 8534.0 80 6652.5 81 4771.0 82 4771.0 83 3748.5 84 2726.0 85 2177.0 86 1628.0 87 1340.5 88 1053.0 89 1053.0 90 760.0 91 467.0 92 365.0 93 263.0 94 222.0 95 181.0 96 181.0 97 126.0 98 71.0 99 58.5 100 46.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6165816.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.91802847842164 #Duplication Level Percentage of deduplicated Percentage of total 1 83.67026704132321 53.480385115444406 2 9.227981249314855 11.796687365840954 3 2.9154281897941767 5.590452661861722 4 1.3727554014590686 3.509752753774715 5 0.7259892806986015 2.3201901759361028 6 0.43283829460009066 1.659970226448003 7 0.31565948843083347 1.412343251970421 8 0.21979971972223444 1.1239331795803902 9 0.16564481951375007 0.95289212618846 >10 0.8601478094564928 9.86775437317336 >50 0.05683603124106209 2.5358175999226065 >100 0.034811220277144395 4.122315036360668 >500 0.001355524671660278 0.5922714722627054 >1k 3.8362855020129236E-4 0.34414098195189086 >5k 5.1150473281754767E-5 0.21290576400296546 >10k+ 5.1150473281754767E-5 0.4781879152806162 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16695 0.2707670809508425 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12557 0.2036551204252608 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7541 0.12230335773886214 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.621845348612414E-5 2 0.0 1.621845348612414E-5 0.0 1.621845348612414E-5 1.621845348612414E-5 3 0.0 1.621845348612414E-5 0.0 1.621845348612414E-5 1.621845348612414E-5 4 0.0 4.865536045837242E-5 0.0 3.243690697224828E-5 1.621845348612414E-5 5 0.0 4.865536045837242E-5 0.0 3.243690697224828E-5 1.621845348612414E-5 6 0.0 4.865536045837242E-5 0.0 3.243690697224828E-5 3.243690697224828E-5 7 0.0 4.865536045837242E-5 0.0 4.865536045837242E-5 3.243690697224828E-5 8 0.0 4.865536045837242E-5 0.0 4.865536045837242E-5 3.243690697224828E-5 9 0.0 9.731072091674484E-5 0.0 1.9462144183348968E-4 4.865536045837242E-5 10 0.0 9.731072091674484E-5 0.0 2.5949525577798624E-4 4.865536045837242E-5 11 0.0 9.731072091674484E-5 0.0 3.243690697224828E-4 4.865536045837242E-5 12 0.0 1.1352917440286898E-4 0.0 3.568059766947311E-4 4.865536045837242E-5 13 0.0 1.1352917440286898E-4 0.0 4.541166976114759E-4 4.865536045837242E-5 14 0.0 1.621845348612414E-4 0.0 4.865536045837242E-4 4.865536045837242E-5 15 1.621845348612414E-5 1.7840298834736554E-4 0.0 4.865536045837242E-4 6.487381394449656E-5 16 4.865536045837242E-5 1.7840298834736554E-4 0.0 5.514274185282207E-4 6.487381394449656E-5 17 4.865536045837242E-5 1.7840298834736554E-4 0.0 5.83864325500469E-4 6.487381394449656E-5 18 4.865536045837242E-5 1.7840298834736554E-4 0.0 6.000827789865932E-4 6.487381394449656E-5 19 4.865536045837242E-5 2.1083989531961382E-4 0.0 6.325196859588415E-4 6.487381394449656E-5 20 4.865536045837242E-5 2.1083989531961382E-4 0.0 6.649565929310897E-4 6.487381394449656E-5 21 4.865536045837242E-5 2.1083989531961382E-4 0.0 7.136119533894622E-4 6.487381394449656E-5 22 4.865536045837242E-5 2.7571370926411036E-4 0.0 8.757964882507035E-4 6.487381394449656E-5 23 4.865536045837242E-5 2.7571370926411036E-4 0.0 0.0010704179300841932 6.487381394449656E-5 24 6.487381394449656E-5 2.919321627502345E-4 0.0 0.001508316174209545 8.10922674306207E-5 25 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.001832685243932028 8.10922674306207E-5 26 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.002870666267043973 8.10922674306207E-5 27 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.008255192824437187 8.10922674306207E-5 28 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.016121142765207395 8.10922674306207E-5 29 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.027182128042744058 9.731072091674484E-5 30 6.487381394449656E-5 3.0815061623635864E-4 0.0 0.04495755306353612 9.731072091674484E-5 31 6.487381394449656E-5 3.243690697224828E-4 0.0 0.1113234647287561 9.731072091674484E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4170 0.0 21.960432 1 CGCGATA 130 2.5941154E-7 15.653846 14 GTATCAA 6100 0.0 14.981967 2 TATACCG 495 0.0 14.202021 5 TATACTG 1125 0.0 13.484445 5 ATCAACG 9600 0.0 13.296874 2 TCGCGCG 140 9.574185E-6 13.214285 17 TACCGAC 435 0.0 13.1839075 7 TCAACGC 9845 0.0 12.947181 3 CGTATAC 245 1.1459633E-10 12.836734 3 TATCAAC 9905 0.0 12.831399 1 CAACGCA 9925 0.0 12.786901 4 ATACCGA 515 0.0 12.572815 6 GTACTAG 520 0.0 12.451923 1 TTATACT 1250 0.0 12.284 4 AACGCAG 10435 0.0 12.2506 5 CGTGCGC 505 0.0 12.089108 10 GCGCGAT 185 1.0414242E-6 12.0 13 ATCGCTC 775 0.0 11.935483 16 TAGACTG 1000 0.0 11.840001 5 >>END_MODULE