##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727435.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5007331 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.206471072114066 31.0 31.0 34.0 30.0 34.0 2 31.500408301348564 31.0 31.0 34.0 30.0 34.0 3 31.614686147171017 31.0 31.0 34.0 30.0 34.0 4 35.4013485427666 37.0 35.0 37.0 33.0 37.0 5 35.20174979445137 37.0 35.0 37.0 32.0 37.0 6 35.20228560884032 37.0 35.0 37.0 32.0 37.0 7 35.12538236437735 37.0 35.0 37.0 32.0 37.0 8 35.12797496310909 37.0 35.0 37.0 32.0 37.0 9 36.73717435496076 39.0 35.0 39.0 32.0 39.0 10 36.50494245337486 39.0 35.0 39.0 32.0 39.0 11 36.623091623062265 39.0 35.0 39.0 32.0 39.0 12 36.46174798510424 38.0 35.0 39.0 32.0 39.0 13 36.56754047215972 39.0 35.0 39.0 32.0 39.0 14 37.655418225797334 39.0 36.0 41.0 32.0 41.0 15 37.60195800916696 39.0 36.0 41.0 32.0 41.0 16 37.56023797907508 39.0 36.0 41.0 32.0 41.0 17 37.518270911190015 39.0 36.0 41.0 32.0 41.0 18 37.493113996258685 39.0 36.0 41.0 32.0 41.0 19 37.49832994862932 39.0 36.0 41.0 32.0 41.0 20 37.47509142095859 39.0 36.0 41.0 32.0 41.0 21 37.40535107425493 39.0 36.0 41.0 32.0 41.0 22 37.351659996113696 39.0 36.0 41.0 31.0 41.0 23 37.27164491422676 39.0 36.0 41.0 31.0 41.0 24 37.20339038901163 39.0 36.0 41.0 31.0 41.0 25 37.10628915883532 39.0 36.0 41.0 31.0 41.0 26 36.90766298453208 39.0 36.0 40.0 30.0 41.0 27 36.83662074666125 39.0 36.0 40.0 30.0 41.0 28 36.69746677421565 39.0 35.0 40.0 30.0 41.0 29 36.566273330043494 39.0 35.0 40.0 30.0 41.0 30 36.66898333663183 39.0 35.0 40.0 30.0 41.0 31 36.64814389142639 39.0 35.0 40.0 30.0 41.0 32 36.584955937604285 39.0 35.0 40.0 30.0 41.0 33 36.497027258633395 39.0 35.0 40.0 30.0 41.0 34 36.46029910944573 38.0 35.0 40.0 30.0 41.0 35 36.37148572762615 38.0 35.0 40.0 30.0 41.0 36 36.28870450145996 38.0 35.0 40.0 30.0 41.0 37 36.19251114016629 38.0 35.0 40.0 29.0 41.0 38 36.073033518255535 38.0 35.0 40.0 29.0 41.0 39 35.97041677492461 38.0 35.0 40.0 29.0 41.0 40 35.84532937806588 38.0 34.0 40.0 28.0 41.0 41 35.70565536809929 38.0 34.0 40.0 27.0 41.0 42 35.59354254791624 38.0 34.0 40.0 27.0 41.0 43 35.425499732292515 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 8.0 13 6.0 14 18.0 15 42.0 16 112.0 17 231.0 18 408.0 19 804.0 20 1610.0 21 3130.0 22 5638.0 23 9895.0 24 16263.0 25 25555.0 26 38364.0 27 55238.0 28 77947.0 29 105065.0 30 136262.0 31 171448.0 32 212896.0 33 259904.0 34 319986.0 35 391794.0 36 489184.0 37 638226.0 38 926380.0 39 1120916.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.26714790773767 19.41355584442091 12.134827915310572 26.18446833253084 2 18.45202564000662 22.527270515969487 32.93175546014434 26.088948383879558 3 20.730085548568688 24.341590360213853 29.57623532376829 25.352088767449168 4 15.28668666001908 16.540308599531368 33.28991033346907 34.88309440698048 5 14.656989921377276 36.784027259232516 33.74192758577374 14.817055233616472 6 34.76624573050992 34.126184188742464 15.776348717510386 15.331221363237221 7 28.095865841503187 30.952956774776823 21.627469803773707 19.323707579946284 8 28.102675856658966 32.792020339777814 20.36546016231002 18.739843641253195 9 27.089800933870762 13.720023701249229 19.154355883403753 40.03581948147626 10 17.510685832432486 26.692263802812317 32.43957709206761 23.357473272687585 11 36.0069665855922 21.657885208706993 20.52672371768513 21.80842448801567 12 21.589445554927366 26.12331799116136 29.058574318334458 23.228662135576815 13 30.88198083969284 19.135223934666993 24.633582241717196 25.34921298392297 14 23.01331787333412 20.831257210677702 24.66735272743104 31.488072188557137 15 26.558759546752555 26.52462958809793 21.928128977293493 24.988481887856025 16 25.3046583099859 25.26803201146479 24.96701336500423 24.46029631354508 17 24.58910745065585 26.507574594130084 25.12891598338516 23.774401971828905 18 25.303040681752414 23.605369806789287 26.681399731713363 24.410189779744936 19 24.830773120450793 25.837816593310887 26.106183114317787 23.22522717192053 20 24.54207640757122 24.159437432835976 26.384295346163455 24.91419081342935 21 24.83726360410366 25.276579479167644 26.004192652732566 23.881964263996128 22 24.878103724319402 25.168258299681007 25.199572386966228 24.75406558903336 23 23.50084306389971 24.46083552295624 26.2181189939311 25.82020241921295 24 24.26228663533527 26.266627870216684 25.682584195053217 23.788501299394827 25 24.806848199170375 24.74923267505184 24.929228764785073 25.514690360992713 26 24.90901839722599 25.274582407274455 25.784434861605916 24.031964333893647 27 25.328962674926025 24.944785954833023 24.962440070368825 24.763811299872128 28 24.177151460528574 25.000244641306917 26.38465481910423 24.43794907906028 29 24.391597040419338 24.769862427708496 26.513445985496066 24.325094546376103 30 23.74666264323249 26.05895236404384 26.570342563733057 23.624042428990613 31 25.58962049842521 24.921819628061336 24.790572063240877 24.69798781027258 32 23.548233579925114 25.435386636114128 25.768817759401163 25.24756202455959 33 23.93249018289384 25.001622620913217 26.0980550317125 24.967832164480438 34 24.245091846334905 25.330580303159504 26.01715364931937 24.407174201186223 35 24.287230063281218 25.60665552167412 26.92991535810195 23.17619905694271 36 24.67512133709555 25.593794378681977 25.41679389678853 24.314290387433946 37 24.337216772767768 25.616061730291044 26.083755996957258 23.962965499983923 38 24.35656839941278 25.113199027585754 26.335087494715246 24.195145078286217 39 24.689979551980887 24.240179049477657 25.651989053649537 25.417852344891916 40 24.440605184678223 25.232623926798524 26.5720001334044 23.754770755118845 41 23.61988851945278 25.229748143272335 26.18494762978521 24.96541570748968 42 25.13446784324823 25.560802751006474 26.27733217556419 23.02739723018111 43 24.520388206811173 24.049199064331876 26.277931297132145 25.152481431724805 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 536.0 1 653.0 2 770.0 3 1894.0 4 3018.0 5 3018.0 6 4298.5 7 5579.0 8 5095.0 9 4611.0 10 6151.0 11 7691.0 12 7691.0 13 13549.5 14 19408.0 15 29048.5 16 38689.0 17 34699.0 18 30709.0 19 30709.0 20 36044.5 21 41380.0 22 34749.0 23 28118.0 24 33464.5 25 38811.0 26 38811.0 27 46842.5 28 54874.0 29 63152.5 30 71431.0 31 82932.0 32 94433.0 33 94433.0 34 112099.5 35 129766.0 36 154109.0 37 178452.0 38 205263.0 39 232074.0 40 232074.0 41 250378.0 42 268682.0 43 288312.0 44 307942.0 45 340130.0 46 372318.0 47 372318.0 48 452602.5 49 532887.0 50 537003.0 51 541119.0 52 463046.5 53 384974.0 54 384974.0 55 374566.5 56 364159.0 57 346511.0 58 328863.0 59 305620.0 60 282377.0 61 282377.0 62 239559.5 63 196742.0 64 173112.0 65 149482.0 66 127815.0 67 106148.0 68 106148.0 69 88327.5 70 70507.0 71 61115.0 72 51723.0 73 39087.5 74 26452.0 75 26452.0 76 20927.5 77 15403.0 78 13047.5 79 10692.0 80 8792.5 81 6893.0 82 6893.0 83 5743.5 84 4594.0 85 3893.5 86 3193.0 87 2083.0 88 973.0 89 973.0 90 711.0 91 449.0 92 312.5 93 176.0 94 191.0 95 206.0 96 206.0 97 107.5 98 9.0 99 13.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5007331.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.745821642897425 #Duplication Level Percentage of deduplicated Percentage of total 1 77.83975938169829 35.608437494012215 2 11.730651486650013 10.732565813265618 3 3.934992660709825 5.40028417268826 4 1.9725500278398522 3.609436870210169 5 1.11640998851927 2.553554610757584 6 0.7273289247515019 1.9963355560441538 7 0.48961741551720234 1.5678565674454434 8 0.3464573468678288 1.2679180797349716 9 0.2682414231032083 1.1043831868664715 >10 1.3963491677689366 11.37799850631362 >50 0.08802225909059859 2.7836614371193886 >100 0.06792907180902726 6.493678109148443 >500 0.01110675906624585 3.6188802735005945 >1k 0.00975652428086747 7.830090502713312 >5k 4.791150316497091E-4 1.452911789889838 >10k+ 3.4844729574524296E-4 2.6020070302899647 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 22758 0.4544936214522267 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 22513 0.44960079531391073 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18590 0.37125566494405904 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18114 0.36174960273247364 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 13794 0.2754760969466568 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12723 0.2540874569705897 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 11864 0.23693260940808586 No Hit CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGT 10234 0.20438033754908552 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 7757 0.15491286675476415 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 7713 0.15403415512176047 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 7645 0.15267614623439113 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 7542 0.15061916218440521 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 7386 0.1475037300310285 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7303 0.14584616035968062 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 6436 0.12853154704572156 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 5510 0.11003866131478028 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 5362 0.10708299491285878 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5157 0.10298899753181884 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 5108 0.10201043230415564 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.9970718931902045E-5 0.0 3 0.0 0.0 0.0 3.994143786380409E-5 0.0 4 0.0 0.0 0.0 5.991215679570614E-5 0.0 5 0.0 0.0 0.0 9.985359465951023E-5 0.0 6 0.0 0.0 0.0 1.1982431359141227E-4 1.9970718931902045E-5 7 0.0 0.0 0.0 1.3979503252331432E-4 3.994143786380409E-5 8 0.0 0.0 0.0 1.3979503252331432E-4 3.994143786380409E-5 9 0.0 0.0 0.0 1.7973647038711842E-4 5.991215679570614E-5 10 0.0 0.0 0.0 2.196779082509225E-4 7.988287572760818E-5 11 0.0 0.0 0.0 2.596193461147266E-4 7.988287572760818E-5 12 0.0 0.0 0.0 2.596193461147266E-4 9.985359465951023E-5 13 0.0 0.0 0.0 2.596193461147266E-4 1.1982431359141227E-4 14 0.0 0.0 0.0 2.7959006504662864E-4 1.5976575145521636E-4 15 0.0 0.0 0.0 3.195315029104327E-4 1.9970718931902045E-4 16 0.0 0.0 0.0 4.1938509756994294E-4 2.196779082509225E-4 17 0.0 0.0 0.0 5.591801300932573E-4 2.196779082509225E-4 18 0.0 0.0 0.0 6.590337247527675E-4 2.596193461147266E-4 19 0.0 0.0 0.0 7.988287572760818E-4 2.995607839785307E-4 20 0.0 0.0 0.0 8.98682351935592E-4 3.3950222184233475E-4 21 0.0 0.0 0.0 0.0011183602601865146 3.3950222184233475E-4 22 0.0 0.0 0.0 0.0012581552927098288 3.3950222184233475E-4 23 0.0 0.0 0.0 0.001777393984939282 3.3950222184233475E-4 24 0.0 0.0 0.0 0.0028158713693981884 3.5947294077423684E-4 25 0.0 0.0 0.0 0.0034948758130828577 3.5947294077423684E-4 26 0.0 0.0 0.0 0.005012650451907413 3.5947294077423684E-4 27 0.0 0.0 0.0 0.00918653070867494 3.5947294077423684E-4 28 0.0 0.0 0.0 0.01931168520714928 3.5947294077423684E-4 29 0.0 0.0 0.0 0.03436960728180342 3.5947294077423684E-4 30 0.0 0.0 0.0 0.05657704673407849 3.5947294077423684E-4 31 0.0 0.0 0.0 0.11351356640893122 3.5947294077423684E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 1980 0.0 23.171717 3 TACACAT 2350 0.0 19.838297 5 TTATACA 2390 0.0 19.04184 2 CTTATAC 2360 0.0 18.891949 1 ATCTCCG 2505 0.0 18.01996 10 ATACACA 2685 0.0 17.776537 4 ACACATC 2800 0.0 16.782143 6 CACGAGA 2755 0.0 16.317604 21 GAGACTA 2790 0.0 16.179213 24 AGACTAG 2825 0.0 16.044249 25 ATCTCGT 2735 0.0 15.963437 37 GATCTCG 2785 0.0 15.94255 36 GACTAGG 2820 0.0 15.941488 26 AAGACGG 1405 0.0 15.800712 5 CGCGATA 95 7.0672446E-5 15.578948 14 CCCACGA 2865 0.0 15.497383 19 TCTCCGA 2925 0.0 15.432478 11 ACATCTC 3110 0.0 15.406754 8 TATACCG 220 1.8189894E-12 15.136364 5 CCACGAG 2985 0.0 15.060301 20 >>END_MODULE