##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727434.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3297865 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.153105418202383 31.0 31.0 34.0 30.0 34.0 2 31.444192227395604 31.0 31.0 34.0 30.0 34.0 3 31.561393507617808 31.0 31.0 34.0 30.0 34.0 4 35.35781088674036 37.0 35.0 37.0 33.0 37.0 5 35.151232085000444 37.0 35.0 37.0 32.0 37.0 6 35.156095534535226 37.0 35.0 37.0 32.0 37.0 7 35.07771512781754 37.0 35.0 37.0 32.0 37.0 8 35.07750529509243 37.0 35.0 37.0 32.0 37.0 9 36.687072697032775 39.0 35.0 39.0 32.0 39.0 10 36.442633340054854 38.0 35.0 39.0 32.0 39.0 11 36.57194427303725 39.0 35.0 39.0 32.0 39.0 12 36.40417391251613 38.0 35.0 39.0 32.0 39.0 13 36.519629821111536 38.0 35.0 39.0 32.0 39.0 14 37.58980309988432 39.0 36.0 41.0 32.0 41.0 15 37.53760508692745 39.0 36.0 41.0 32.0 41.0 16 37.48862218435261 39.0 36.0 41.0 32.0 41.0 17 37.45136595949197 39.0 36.0 41.0 32.0 41.0 18 37.42238478530807 39.0 36.0 41.0 32.0 41.0 19 37.424893074762004 39.0 36.0 41.0 32.0 41.0 20 37.40007853565868 39.0 36.0 41.0 32.0 41.0 21 37.33398759500465 39.0 36.0 41.0 31.0 41.0 22 37.275164083429736 39.0 36.0 41.0 31.0 41.0 23 37.19630791436278 39.0 36.0 40.0 31.0 41.0 24 37.13572023111922 39.0 36.0 41.0 31.0 41.0 25 37.04000588259374 39.0 36.0 40.0 31.0 41.0 26 36.83619068700508 39.0 36.0 40.0 30.0 41.0 27 36.767673934500046 39.0 36.0 40.0 30.0 41.0 28 36.6236753172128 39.0 35.0 40.0 30.0 41.0 29 36.49628865948121 38.0 35.0 40.0 30.0 41.0 30 36.6062843688265 39.0 35.0 40.0 30.0 41.0 31 36.586002155940285 39.0 35.0 40.0 30.0 41.0 32 36.54025922831893 39.0 35.0 40.0 30.0 41.0 33 36.45957066162502 38.0 35.0 40.0 30.0 41.0 34 36.42619937444377 38.0 35.0 40.0 30.0 41.0 35 36.34386459118248 38.0 35.0 40.0 30.0 41.0 36 36.26639962521207 38.0 35.0 40.0 30.0 41.0 37 36.175616952179666 38.0 35.0 40.0 29.0 41.0 38 36.06708825255127 38.0 35.0 40.0 29.0 41.0 39 35.965466445715634 38.0 35.0 40.0 29.0 41.0 40 35.8373593218643 38.0 34.0 40.0 28.0 41.0 41 35.7061435201259 38.0 34.0 40.0 27.0 41.0 42 35.60200553994782 38.0 34.0 40.0 27.0 41.0 43 35.436768030225615 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 4.0 14 10.0 15 30.0 16 56.0 17 132.0 18 249.0 19 553.0 20 1047.0 21 2062.0 22 3772.0 23 6538.0 24 10797.0 25 16918.0 26 25452.0 27 37379.0 28 52296.0 29 70179.0 30 91220.0 31 115149.0 32 142374.0 33 173732.0 34 213735.0 35 262632.0 36 326286.0 37 422849.0 38 621197.0 39 701213.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.889555818688756 19.648894057215806 12.189340679500223 26.27220944459522 2 18.325007239532244 22.694076319073098 32.993466985458774 25.987449455935884 3 20.786235943557426 24.376467805686406 29.66595054679315 25.171345703963016 4 15.307782459257732 16.936472536019515 33.39066335341198 34.365081651310774 5 14.545228503895702 36.789438015200744 34.05130288838385 14.614030592519706 6 34.63380095910536 34.538800102490555 15.775630597371329 15.051768341032759 7 27.922428601534627 30.936560471699114 21.70561863508664 19.43539229167962 8 27.905023401503698 33.17652481226491 20.34889238947016 18.569559396761235 9 26.83566489228637 13.777640988942846 19.214491799997877 40.172202318772904 10 17.183632440988337 26.980273601254147 32.85941055804285 22.976683399714666 11 35.9713329684508 21.722932867173157 20.559847052562795 21.74588711181325 12 21.442114822771703 26.328154730408915 29.19137078079303 23.038359666026352 13 30.963456660597082 19.297030048228173 24.51752876482209 25.221984526352653 14 22.769731326176178 20.879660022469082 24.788097754153064 31.562510897201673 15 26.37667096742893 26.811285483183816 21.917725558808502 24.894317990578756 16 25.155759862820336 25.45025342153181 25.054209314207824 24.33977740144002 17 24.424013717966016 26.75261115903774 25.17971475484897 23.64366036814727 18 25.12292043488742 23.85434212740667 26.682687132432648 24.340050305273262 19 24.730484722691802 26.1960389524738 25.932353204270036 23.141123120564366 20 24.582904394206555 24.396298817568336 26.294951430698344 24.72584535752676 21 24.719083406992098 25.549226545052633 25.81624778455152 23.915442263403747 22 24.671082654990425 25.525362620968416 25.17031473392634 24.633239990114816 23 23.43349409390621 24.786399685857365 26.118231037352952 25.66187518288347 24 24.222822947573658 26.563185576122734 25.43624435809228 23.77774711821133 25 24.727634393766877 25.00223629530014 24.85271531733409 25.417413993598885 26 24.75580413388662 25.474117345616026 25.79032192039395 23.9797566001034 27 25.29442533275316 25.094659726823267 24.915938038700798 24.694976901722782 28 24.07157357866377 25.17119409072233 26.512546753733098 24.2446855768808 29 24.49769775294016 24.87254632921602 26.201982191508748 24.42777372633507 30 23.94245974289427 25.94090419104481 26.631896696802325 23.484739369258595 31 25.213615475466707 25.223894853185318 24.81723781901321 24.745251852334768 32 23.244765931898364 25.619757024620476 25.7432308478364 25.39224619564476 33 23.79254457050243 25.24078456819791 26.477948612208202 24.488722249091456 34 24.099015575228215 25.292029843550296 26.001943681745615 24.607010899475874 35 24.232010709959322 25.794627736429476 26.693300059280777 23.280061494330422 36 24.438629234368296 25.65969195221757 25.634463508967166 24.267215304446967 37 24.241077181752438 25.820189728809396 25.9405706419153 23.998162447522866 38 24.199110636730126 25.302491157157736 26.38940647964668 24.108991726465455 39 24.65119099781222 24.487903537591745 25.617452503362024 25.24345296123401 40 24.394388490735672 25.455074722585675 26.61209600756853 23.538440779110122 41 23.644691338183947 25.333723484739366 26.077992883274483 24.9435922938022 42 25.080862921920698 25.739137290337837 26.18102924164573 22.99897054609573 43 24.578446964930343 24.19307642975076 26.262142325413564 24.966334279905332 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 178.0 1 247.0 2 316.0 3 896.0 4 1476.0 5 1476.0 6 2144.0 7 2812.0 8 2619.0 9 2426.0 10 3286.0 11 4146.0 12 4146.0 13 7269.5 14 10393.0 15 16372.5 16 22352.0 17 20167.5 18 17983.0 19 17983.0 20 21775.5 21 25568.0 22 22587.5 23 19607.0 24 24237.5 25 28868.0 26 28868.0 27 35208.0 28 41548.0 29 47648.5 30 53749.0 31 62124.0 32 70499.0 33 70499.0 34 82494.5 35 94490.0 36 110150.5 37 125811.0 38 141527.5 39 157244.0 40 157244.0 41 168370.5 42 179497.0 43 190160.0 44 200823.0 45 221922.5 46 243022.0 47 243022.0 48 294954.0 49 346886.0 50 344271.5 51 341657.0 52 300409.0 53 259161.0 54 259161.0 55 245876.0 56 232591.0 57 225974.5 58 219358.0 59 203033.5 60 186709.0 61 186709.0 62 157350.0 63 127991.0 64 112193.5 65 96396.0 66 81812.0 67 67228.0 68 67228.0 69 55532.0 70 43836.0 71 37665.5 72 31495.0 73 23814.5 74 16134.0 75 16134.0 76 12794.0 77 9454.0 78 8003.0 79 6552.0 80 5283.5 81 4015.0 82 4015.0 83 3368.0 84 2721.0 85 2276.0 86 1831.0 87 1195.0 88 559.0 89 559.0 90 402.5 91 246.0 92 183.0 93 120.0 94 112.0 95 104.0 96 104.0 97 55.0 98 6.0 99 6.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3297865.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.856825520391325 #Duplication Level Percentage of deduplicated Percentage of total 1 83.51876214381723 44.98055400458629 2 9.509035658623164 10.242529486672943 3 2.8105277927794914 4.540983148678069 4 1.272916245627035 2.742209125712273 5 0.6871248612907852 1.8503181882630455 6 0.43522525727528727 1.4063910445885544 7 0.29954526476067633 1.129278994177262 8 0.2122747476514408 0.9145955237318999 9 0.16122945331780195 0.7814975882476446 >10 0.9337362310050834 9.308383080755275 >50 0.08114112977671432 3.038482732378382 >100 0.061368838043497 6.828859504600972 >500 0.01110901788350684 4.122564626593034 >1k 0.005330084337273897 4.976436380608687 >5k 4.4884920734938075E-4 1.604371179964893 >10k+ 2.2442460367469037E-4 1.5325453904408974 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 15184 0.4604190893199085 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 14731 0.4466829297136178 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10461 0.31720522216646224 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10342 0.31359682703809894 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 8793 0.26662704507310037 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7900 0.23954892028630642 No Hit CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGT 7680 0.23287793769605486 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6958 0.21098498574077473 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 5993 0.1817236302880803 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 5610 0.17011005605141508 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 5132 0.15561583024168668 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 5029 0.15249259748352342 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 4761 0.14436612778267152 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 4243 0.12865899604744283 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3839 0.11640864619988994 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 3623 0.10985895420218839 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 3572 0.10831249914717551 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 3358 0.10182345244574899 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 3319 0.10064086916838622 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.0322648137507144E-5 0.0 3 0.0 3.0322648137507144E-5 0.0 3.0322648137507144E-5 0.0 4 0.0 3.0322648137507144E-5 0.0 3.0322648137507144E-5 0.0 5 0.0 3.0322648137507144E-5 0.0 9.096794441252144E-5 0.0 6 0.0 3.0322648137507144E-5 0.0 9.096794441252144E-5 0.0 7 0.0 3.0322648137507144E-5 0.0 1.2129059255002857E-4 0.0 8 0.0 3.0322648137507144E-5 0.0 1.2129059255002857E-4 0.0 9 0.0 9.096794441252144E-5 0.0 3.0322648137507145E-4 0.0 10 0.0 9.096794441252144E-5 0.0 4.5483972206260715E-4 0.0 11 3.0322648137507144E-5 9.096794441252144E-5 0.0 4.851623702001143E-4 0.0 12 3.0322648137507144E-5 9.096794441252144E-5 0.0 5.761303146126357E-4 0.0 13 3.0322648137507144E-5 9.096794441252144E-5 0.0 5.761303146126357E-4 0.0 14 3.0322648137507144E-5 1.2129059255002857E-4 0.0 5.761303146126357E-4 0.0 15 3.0322648137507144E-5 1.2129059255002857E-4 0.0 6.3677561088765E-4 0.0 16 6.064529627501429E-5 1.2129059255002857E-4 0.0 7.277435553001715E-4 0.0 17 6.064529627501429E-5 1.2129059255002857E-4 0.0 7.580662034376787E-4 0.0 18 6.064529627501429E-5 1.2129059255002857E-4 0.0 8.490341478502001E-4 0.0 19 6.064529627501429E-5 1.5161324068753572E-4 0.0 9.400020922627214E-4 0.0 20 6.064529627501429E-5 1.5161324068753572E-4 0.0 9.703247404002286E-4 0.0 21 6.064529627501429E-5 1.5161324068753572E-4 0.0 0.0012129059255002858 0.0 22 6.064529627501429E-5 1.8193588882504288E-4 0.0 0.0017283909438379074 0.0 23 6.064529627501429E-5 1.8193588882504288E-4 0.0 0.0019406494808004572 1.2129059255002857E-4 24 6.064529627501429E-5 1.8193588882504288E-4 0.0 0.0024561344991380785 1.2129059255002857E-4 25 6.064529627501429E-5 1.8193588882504288E-4 0.0 0.0028503289249256717 1.2129059255002857E-4 26 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.003941944257875929 1.5161324068753572E-4 27 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.006276788164463979 1.5161324068753572E-4 28 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.013311642532365636 1.8193588882504288E-4 29 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.022681340806855344 1.8193588882504288E-4 30 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.03790331017188393 1.8193588882504288E-4 31 6.064529627501429E-5 2.1225853696255003E-4 0.0 0.08168921408244424 1.8193588882504288E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 1510 0.0 24.013247 3 CTTATAC 1450 0.0 22.58276 1 TTATACA 1560 0.0 21.820513 2 TACACAT 1950 0.0 18.405128 5 GCCGTCT 555 0.0 17.666666 36 ATACACA 2075 0.0 17.385542 4 ACGGACC 865 0.0 16.895952 8 ATCTCCG 1930 0.0 16.870466 10 CAAGACG 905 0.0 16.55801 4 AAGACGG 865 0.0 16.468208 5 ACACATC 2130 0.0 16.068075 6 ATGCGAC 200 3.6379788E-12 15.725 21 TGCGACG 155 7.223207E-9 15.5161295 22 ACATCTC 2235 0.0 15.478746 8 ACGACGG 720 0.0 15.416666 6 TCGACCG 170 1.4897523E-9 15.235294 9 CGGACCA 920 0.0 15.081522 9 TACGCTG 150 8.115421E-8 14.8 5 CGCAAGA 965 0.0 14.761659 2 ACGGACT 2170 0.0 14.663594 27 >>END_MODULE