##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727433.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3950219 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.26644725267131 31.0 31.0 34.0 30.0 34.0 2 31.560987378168146 31.0 31.0 34.0 30.0 34.0 3 31.68448787269769 31.0 31.0 34.0 30.0 34.0 4 35.45726148347725 37.0 35.0 37.0 33.0 37.0 5 35.255591905157665 37.0 35.0 37.0 33.0 37.0 6 35.25214323560289 37.0 35.0 37.0 32.0 37.0 7 35.17351670882045 37.0 35.0 37.0 32.0 37.0 8 35.17231778795049 37.0 35.0 37.0 32.0 37.0 9 36.80500777298676 39.0 37.0 39.0 32.0 39.0 10 36.57060406017995 39.0 35.0 39.0 32.0 39.0 11 36.687992741668246 39.0 35.0 39.0 32.0 39.0 12 36.52127185859822 39.0 35.0 39.0 32.0 39.0 13 36.62639134691013 39.0 35.0 39.0 32.0 39.0 14 37.73659713550059 40.0 37.0 41.0 32.0 41.0 15 37.684036505317806 40.0 37.0 41.0 32.0 41.0 16 37.63745529045352 39.0 36.0 41.0 32.0 41.0 17 37.58287173445321 39.0 36.0 41.0 32.0 41.0 18 37.54642540071829 39.0 36.0 41.0 32.0 41.0 19 37.54004322292005 39.0 36.0 41.0 32.0 41.0 20 37.511536195841295 39.0 36.0 41.0 32.0 41.0 21 37.44106643201301 39.0 36.0 41.0 32.0 41.0 22 37.38842529996438 39.0 36.0 41.0 31.0 41.0 23 37.29706808660482 39.0 36.0 41.0 31.0 41.0 24 37.23079176116565 39.0 36.0 41.0 31.0 41.0 25 37.14488918209345 39.0 36.0 41.0 31.0 41.0 26 36.94331554782153 39.0 36.0 40.0 30.0 41.0 27 36.87233948295019 39.0 36.0 40.0 30.0 41.0 28 36.72284827752588 39.0 36.0 40.0 30.0 41.0 29 36.59331267456311 39.0 35.0 40.0 30.0 41.0 30 36.72067624605117 39.0 35.0 40.0 30.0 41.0 31 36.723394323200814 39.0 35.0 40.0 30.0 41.0 32 36.67285763143765 39.0 35.0 40.0 30.0 41.0 33 36.59669527183176 39.0 35.0 40.0 30.0 41.0 34 36.5584444811794 39.0 35.0 40.0 30.0 41.0 35 36.46877957905625 39.0 35.0 40.0 30.0 41.0 36 36.39556161316626 38.0 35.0 40.0 30.0 41.0 37 36.31304036561011 38.0 35.0 40.0 30.0 41.0 38 36.20277179569032 38.0 35.0 40.0 29.0 41.0 39 36.10918432623609 38.0 35.0 40.0 29.0 41.0 40 35.982475908297744 38.0 35.0 40.0 28.0 41.0 41 35.85582647443091 38.0 34.0 40.0 28.0 41.0 42 35.746250524338016 38.0 34.0 40.0 27.0 41.0 43 35.59685703501502 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 6.0 15 45.0 16 101.0 17 217.0 18 332.0 19 619.0 20 1225.0 21 2393.0 22 4355.0 23 7670.0 24 12080.0 25 19173.0 26 28603.0 27 41904.0 28 58439.0 29 79194.0 30 104098.0 31 131895.0 32 163689.0 33 200588.0 34 249548.0 35 306080.0 36 383495.0 37 498955.0 38 745144.0 39 910366.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.503035907629425 18.957252749784253 11.818154892171801 26.721556450414518 2 18.602740759436376 22.149582086461535 32.44328985304359 26.804387301058497 3 20.738647654724964 23.74524045375712 29.208785639479736 26.307326252038177 4 15.332441062128455 16.17325520433171 33.266003732957586 35.228300000582244 5 15.025394794567088 36.224523247951566 33.69284082730603 15.057241130175314 6 35.478817756686404 33.831668573312015 15.655790223276227 15.033723446725359 7 28.802706887896594 30.432869671276453 21.48432783093798 19.28009560988897 8 28.222207426980635 32.325726750845966 20.31249406678465 19.13957175538875 9 27.18221445443911 13.723796073078478 18.798932413620612 40.2950570588618 10 17.478549923434624 25.98311637911721 32.42177205871371 24.11656163873446 11 36.859146290370234 21.212722636390538 20.229941681714354 21.698189391524874 12 22.011412531811526 25.635717918424273 28.675144340098612 23.67772520966559 13 30.930664856809205 18.644358705175588 24.25240220858641 26.172574229428797 14 23.26721632395571 20.51564736031091 23.880574722566013 32.33656159316737 15 26.832689529365332 26.26742972984536 21.325526508783437 25.57435423200587 16 25.94840944261571 24.911099865602388 24.341561822268588 24.798928869513308 17 25.328975431488736 25.918816146649082 24.458390787953782 24.2938176339084 18 26.18745948009465 23.032419215238445 25.947953771676964 24.832167532989942 19 25.518104186122336 25.656020590250815 24.802067935980258 24.023807287646584 20 25.1725284091844 23.78232700516098 25.327785624037553 25.717358961617066 21 25.565721799221762 25.034181649169323 24.75569076043632 24.64440579117259 22 25.447120779885875 24.698605317831746 24.207670511432404 25.646603390849975 23 23.87485352077948 23.99110024026516 25.283813378448134 26.850232860507226 24 24.674505388182276 26.08225012334759 24.60731923976873 24.6359252487014 25 25.647362842414562 24.18526669027717 23.71506491159098 26.45230555571729 26 25.41251510359299 24.983095873924967 24.675239524694707 24.929149497787336 27 26.380309547394713 24.162204677765967 23.863892103197315 25.593593671642 28 24.886215169336182 24.406418985884073 25.51225640907504 25.195109435704705 29 25.007752734721794 24.238529560006672 25.495649734862802 25.25806797040873 30 24.41684878737103 25.413654280939866 25.70928345998032 24.460213471708784 31 26.201129608257162 24.53066526185004 23.500064173657208 25.76814095623559 32 24.088765711470682 24.82447175713549 24.679011467465475 26.40775106392835 33 24.724148205453925 24.357333099759785 25.137365801744156 25.78115289304213 34 25.158832965969737 24.609065978367276 25.016233277192985 25.215867778470002 35 25.418337565588132 24.99767734396498 25.797000115689787 23.786984974757093 36 25.29862268395752 25.128758684012205 24.435961651746396 25.136656980283878 37 25.38957966634255 24.87943073535923 25.078179209810898 24.652810388487325 38 25.20146351379506 24.542082350370954 25.274775904829582 24.98167823100441 39 25.732573307960898 23.549150059781496 24.529146358720872 26.189130273536733 40 25.526837879115057 24.755640130332015 25.314090180822884 24.40343180973004 41 24.40105219482768 24.798042842687963 25.247992579651914 25.552912382832442 42 26.480126798033222 24.990361293892818 25.278598477704655 23.250913430369305 43 25.61549119175418 23.282152204725865 25.137340486692004 25.965016116827954 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 151.0 1 204.5 2 258.0 3 642.0 4 1026.0 5 1026.0 6 1554.5 7 2083.0 8 1888.0 9 1693.0 10 2264.5 11 2836.0 12 2836.0 13 4899.5 14 6963.0 15 10185.0 16 13407.0 17 12501.5 18 11596.0 19 11596.0 20 14294.0 21 16992.0 22 16321.0 23 15650.0 24 19252.0 25 22854.0 26 22854.0 27 28330.5 28 33807.0 29 39940.0 30 46073.0 31 54881.5 32 63690.0 33 63690.0 34 77614.5 35 91539.0 36 112608.0 37 133677.0 38 156490.5 39 179304.0 40 179304.0 41 193856.0 42 208408.0 43 223026.0 44 237644.0 45 266059.0 46 294474.0 47 294474.0 48 367078.5 49 439683.0 50 433950.5 51 428218.0 52 372379.0 53 316540.0 54 316540.0 55 305610.5 56 294681.0 57 285150.5 58 275620.0 59 259231.0 60 242842.0 61 242842.0 62 205469.0 63 168096.0 64 149574.5 65 131053.0 66 113165.5 67 95278.0 68 95278.0 69 79277.0 70 63276.0 71 55717.0 72 48158.0 73 35727.5 74 23297.0 75 23297.0 76 18496.0 77 13695.0 78 11708.5 79 9722.0 80 7989.5 81 6257.0 82 6257.0 83 5447.0 84 4637.0 85 3915.5 86 3194.0 87 2106.5 88 1019.0 89 1019.0 90 728.0 91 437.0 92 314.5 93 192.0 94 189.5 95 187.0 96 187.0 97 97.5 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3950219.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.10179402553778 #Duplication Level Percentage of deduplicated Percentage of total 1 80.79862460513382 38.86558798302895 2 10.544068528932165 10.143772251397001 3 3.529688270982803 5.093530145555141 4 1.605751463916175 3.089581046940064 5 0.9318327517883411 2.2411413546386427 6 0.5652368741757415 1.6313344618344203 7 0.38558494986684555 1.298312948648962 8 0.2660681672460499 1.0238684942097465 9 0.21392186474302333 0.9261022927885073 >10 1.009463219033324 8.47039459832049 >50 0.05974709515156289 2.017671580966945 >100 0.06346120528095711 6.72421008189803 >500 0.013747752937218164 4.773515601363788 >1k 0.012068638060621195 10.482052055537878 >5k 5.24723393940052E-4 1.6087558276105622 >10k+ 2.098893575760208E-4 1.6101692752610406 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 20658 0.5229583473726394 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 20172 0.5106552320263763 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 12205 0.3089702115249813 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 10759 0.27236464611202565 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 8526 0.2158361346548128 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 8448 0.21386156058689404 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 6551 0.16583890665302353 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6136 0.1553331600096096 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 6116 0.1548268589665535 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5955 0.15075113556995196 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 5828 0.14753612394654575 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 5641 0.14280220919397127 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 5324 0.1347773376615322 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5213 0.13196736687257085 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 4953 0.12538545331284165 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 4668 0.1181706634492923 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 4639 0.11743652693686098 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 4282 0.10839905331830971 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 4228 0.10703204050205824 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4109 0.10401954929587448 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.5315052152804692E-5 2 0.0 0.0 0.0 0.0 2.5315052152804692E-5 3 0.0 0.0 0.0 0.0 2.5315052152804692E-5 4 0.0 0.0 0.0 2.5315052152804692E-5 2.5315052152804692E-5 5 0.0 0.0 0.0 1.2657526076402347E-4 2.5315052152804692E-5 6 5.0630104305609385E-5 0.0 0.0 1.2657526076402347E-4 7.594515645841407E-5 7 5.0630104305609385E-5 0.0 0.0 1.2657526076402347E-4 7.594515645841407E-5 8 5.0630104305609385E-5 0.0 0.0 1.2657526076402347E-4 1.0126020861121877E-4 9 5.0630104305609385E-5 0.0 0.0 1.5189031291682815E-4 1.5189031291682815E-4 10 5.0630104305609385E-5 0.0 0.0 2.784655736808516E-4 1.5189031291682815E-4 11 5.0630104305609385E-5 0.0 0.0 3.037806258336563E-4 1.7720536506963286E-4 12 5.0630104305609385E-5 0.0 0.0 3.29095677986461E-4 2.2783546937524222E-4 13 5.0630104305609385E-5 0.0 0.0 3.29095677986461E-4 2.784655736808516E-4 14 5.0630104305609385E-5 0.0 0.0 3.797257822920704E-4 3.797257822920704E-4 15 5.0630104305609385E-5 0.0 0.0 3.797257822920704E-4 4.050408344448751E-4 16 5.0630104305609385E-5 0.0 0.0 4.3035588659767976E-4 4.5567093875048444E-4 17 5.0630104305609385E-5 0.0 0.0 4.5567093875048444E-4 4.5567093875048444E-4 18 5.0630104305609385E-5 0.0 0.0 5.316160952088985E-4 5.569311473617032E-4 19 5.0630104305609385E-5 0.0 0.0 6.075612516673126E-4 5.569311473617032E-4 20 5.0630104305609385E-5 0.0 0.0 6.835064081257267E-4 6.075612516673126E-4 21 5.0630104305609385E-5 0.0 0.0 8.100816688897502E-4 6.328763038201173E-4 22 5.0630104305609385E-5 0.0 0.0 0.0010126020861121877 6.58191355972922E-4 23 5.0630104305609385E-5 0.0 0.0 0.0013670128162514535 7.847666167369455E-4 24 5.0630104305609385E-5 0.0 0.0 0.001721423546390719 7.847666167369455E-4 25 5.0630104305609385E-5 0.0 0.0 0.0021011493286827894 7.847666167369455E-4 26 5.0630104305609385E-5 0.0 0.0 0.003189696571253391 8.353967210425548E-4 27 5.0630104305609385E-5 0.0 0.0 0.005189585691324962 8.353967210425548E-4 28 5.0630104305609385E-5 0.0 0.0 0.009594404765912978 8.353967210425548E-4 29 5.0630104305609385E-5 0.0 0.0 0.017087660203143167 8.353967210425548E-4 30 5.0630104305609385E-5 2.5315052152804692E-5 0.0 0.027770612211626747 8.353967210425548E-4 31 5.0630104305609385E-5 2.5315052152804692E-5 0.0 0.06055360474950883 8.353967210425548E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 1280 0.0 17.34375 5 CAAGACG 1335 0.0 16.906368 4 TATACTG 510 0.0 15.598039 5 CGCAAGA 1385 0.0 15.494584 2 GACGGAC 1415 0.0 15.427562 7 ACGGACC 1420 0.0 15.242957 8 TCTAGCG 965 0.0 14.953368 28 CGAGCCG 1455 0.0 14.876288 15 GCGCAAG 1435 0.0 14.825784 1 TATACAC 1050 0.0 14.799999 3 AACGCTT 1140 0.0 14.767544 30 TTATACA 1005 0.0 14.726368 2 CGCAATA 1010 0.0 14.653466 36 TAAACGC 1150 0.0 14.63913 28 AGACGGA 1510 0.0 14.579469 6 CTAGCGG 1010 0.0 14.470298 29 AAACGCT 1190 0.0 14.457984 29 CGAACGA 615 0.0 14.439024 16 CGGACCA 1565 0.0 14.421725 9 CGCTTCG 1170 0.0 14.388889 32 >>END_MODULE