##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727429.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2699611 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.663167397080542 31.0 30.0 31.0 27.0 34.0 2 30.970086060547242 31.0 31.0 34.0 27.0 34.0 3 31.04486424155184 31.0 31.0 34.0 27.0 34.0 4 34.89004971456999 35.0 35.0 37.0 32.0 37.0 5 34.64780592463136 35.0 35.0 37.0 32.0 37.0 6 34.74965726543565 35.0 35.0 37.0 32.0 37.0 7 34.688896289132025 35.0 35.0 37.0 31.0 37.0 8 34.68076919230215 35.0 35.0 37.0 30.0 37.0 9 36.232186785429455 38.0 35.0 39.0 32.0 39.0 10 35.91817080312682 37.0 35.0 39.0 30.0 39.0 11 36.095963085051885 38.0 35.0 39.0 31.0 39.0 12 35.88247936461957 37.0 35.0 39.0 30.0 39.0 13 36.02907159587066 37.0 35.0 39.0 30.0 39.0 14 36.97733932777722 39.0 36.0 40.0 31.0 41.0 15 36.92701763328124 38.0 36.0 40.0 31.0 41.0 16 36.88377658855294 38.0 36.0 40.0 31.0 41.0 17 36.81673359606254 38.0 36.0 40.0 31.0 41.0 18 36.7952705037874 38.0 36.0 40.0 31.0 41.0 19 36.78847359860365 39.0 36.0 40.0 30.0 41.0 20 36.749800989846314 39.0 36.0 40.0 30.0 41.0 21 36.65552370322983 38.0 35.0 40.0 30.0 41.0 22 36.57616782566081 38.0 35.0 40.0 30.0 41.0 23 36.480567385449234 38.0 35.0 40.0 30.0 41.0 24 36.37728287519943 38.0 35.0 40.0 30.0 41.0 25 36.26866796734789 38.0 35.0 40.0 30.0 41.0 26 36.02725874209284 38.0 34.0 40.0 29.0 41.0 27 35.91924836578307 38.0 34.0 40.0 28.0 41.0 28 35.74581337829784 38.0 34.0 40.0 27.0 41.0 29 35.577410226880836 38.0 34.0 40.0 27.0 41.0 30 35.728863528856564 38.0 34.0 40.0 27.0 41.0 31 35.7257508581792 38.0 34.0 40.0 27.0 41.0 32 35.67987980490523 38.0 34.0 40.0 27.0 41.0 33 35.5664949505688 38.0 34.0 40.0 27.0 41.0 34 35.52421700756146 38.0 34.0 40.0 27.0 41.0 35 35.41429228136943 38.0 34.0 40.0 27.0 41.0 36 35.31237648683459 38.0 34.0 40.0 26.0 41.0 37 35.21976314365292 38.0 33.0 40.0 26.0 41.0 38 35.09368090439697 38.0 33.0 40.0 26.0 41.0 39 34.997331096961744 38.0 33.0 40.0 25.0 41.0 40 34.82716102431054 38.0 33.0 40.0 25.0 41.0 41 34.66752061685924 38.0 33.0 40.0 25.0 41.0 42 34.54023820468949 37.0 33.0 40.0 24.0 41.0 43 34.36907502599448 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 4.0 12 4.0 13 10.0 14 27.0 15 60.0 16 155.0 17 267.0 18 440.0 19 881.0 20 1733.0 21 3142.0 22 5492.0 23 9314.0 24 14667.0 25 21634.0 26 31000.0 27 42588.0 28 57090.0 29 74271.0 30 92933.0 31 113935.0 32 137232.0 33 164526.0 34 198055.0 35 238610.0 36 296110.0 37 381160.0 38 521052.0 39 293216.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.44116393065519 22.79561759083068 13.54547006957669 24.217748408937435 2 21.788731783949615 23.842101695392408 30.72350053396582 23.64566598669216 3 23.257647120270292 24.796313246612197 28.89801530664974 23.048024326467775 4 17.92017442513014 18.2551486121519 31.983385754466102 31.841291208251853 5 14.944856870119436 37.6719831116409 33.20533958411045 14.177820434129213 6 34.662216148919235 35.650210345120094 14.959155226438178 14.728418279522495 7 28.0882690135727 31.43645510408722 21.055589120062113 19.419686762277973 8 27.89275936421951 33.402553182662245 19.763921542770422 18.940765910347825 9 26.75874413017283 13.549841069694857 19.107160253829164 40.58425454630315 10 17.335571680512487 27.124018979030684 32.27828009294672 23.262129247510106 11 36.92798703220575 21.37867270506751 20.484617969033316 21.208722293693423 12 21.16038199577643 26.494854258632078 28.67827994477723 23.666483800814262 13 31.089738484544625 19.209471290493337 24.66681310751808 25.033977117443957 14 22.902447797108547 21.000358940602922 24.359805912777805 31.737387349510726 15 26.026897949371225 27.72666135972924 21.31577475421459 24.93066593668495 16 25.986299507595724 25.56109009779557 23.958599961253675 24.49401043335503 17 24.049724201005258 27.28070822055474 24.472192475138087 24.197375103301923 18 25.132732086215388 23.879032942153515 26.0518645093682 24.936370462262897 19 24.83065152720151 25.859799800786114 25.421588517753115 23.88796015425926 20 24.83291111200836 24.402960278351216 25.531382113941604 25.232746495698827 21 25.811829926607942 25.159439637784853 25.04427489738336 23.98445553822384 22 25.1372142134552 25.925475929680243 25.213928969766386 23.723380887098177 23 24.47956390754075 24.362806345062307 25.79149366334631 25.366136084050627 24 24.655663352979374 26.15736119018629 25.463557527362273 23.72341792947206 25 25.11961908586089 25.3079795570547 24.87417631651375 24.69822504057066 26 25.222856181872128 25.713741720566407 25.35435660915591 23.709045488405554 27 25.431441789205927 25.44618465401126 24.996823616439553 24.12554994034326 28 25.043348838036295 24.804573695988054 26.179660699263707 23.972416766711945 29 24.292166538067892 25.253193886082105 25.86254093645344 24.592098639396564 30 24.31124336061751 25.9098810902756 26.100056637789663 23.678818911317222 31 25.643731633928002 25.373692728322712 24.777162339314813 24.20541329843448 32 24.457116228967806 25.627840455532297 25.186962121579736 24.72808119392016 33 24.601618529484433 24.94288992006626 25.93369933668221 24.521792213767093 34 25.05486901631383 25.553755707766783 25.494043401067785 23.8973318748516 35 25.216929402050887 25.08413249168121 26.537712285214425 23.161225821053478 36 24.74230546549114 25.659659854697587 25.291273446433575 24.306761233377696 37 24.836059713788394 25.595613590254302 25.64347233731082 23.924854358646485 38 24.22934267196274 24.7597894659638 26.4634423255795 24.54742553649396 39 25.25367543694258 24.54809229922385 25.186776909710325 25.011455354123243 40 24.61850985197497 25.031680490263224 26.606796312505764 23.74301334525604 41 24.105991566933163 25.23733975006029 26.057865373937204 24.598803309069346 42 25.401289296865365 25.312832108033344 26.16795530911676 23.11792328598454 43 24.807981594385264 24.177149967161935 26.392691391463437 24.622177046989364 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 221.0 1 249.0 2 277.0 3 491.5 4 706.0 5 706.0 6 1381.5 7 2057.0 8 1955.5 9 1854.0 10 2496.0 11 3138.0 12 3138.0 13 6066.0 14 8994.0 15 13671.5 16 18349.0 17 16010.0 18 13671.0 19 13671.0 20 17405.5 21 21140.0 22 19318.5 23 17497.0 24 21339.5 25 25182.0 26 25182.0 27 30708.0 28 36234.0 29 40627.0 30 45020.0 31 51554.0 32 58088.0 33 58088.0 34 68293.5 35 78499.0 36 92299.0 37 106099.0 38 117285.5 39 128472.0 40 128472.0 41 139129.5 42 149787.0 43 158047.5 44 166308.0 45 181057.5 46 195807.0 47 195807.0 48 219240.5 49 242674.0 50 241484.5 51 240295.0 52 232780.0 53 225265.0 54 225265.0 55 211043.5 56 196822.0 57 194625.5 58 192429.0 59 177164.0 60 161899.0 61 161899.0 62 136444.5 63 110990.0 64 98870.5 65 86751.0 66 74187.5 67 61624.0 68 61624.0 69 50051.5 70 38479.0 71 33724.5 72 28970.0 73 21432.0 74 13894.0 75 13894.0 76 10802.0 77 7710.0 78 6592.5 79 5475.0 80 4461.5 81 3448.0 82 3448.0 83 2860.0 84 2272.0 85 2066.0 86 1860.0 87 1286.0 88 712.0 89 712.0 90 531.5 91 351.0 92 250.0 93 149.0 94 134.5 95 120.0 96 120.0 97 63.5 98 7.0 99 11.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2699611.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.36543437768825 #Duplication Level Percentage of deduplicated Percentage of total 1 86.00190657032351 48.475348211456456 2 8.094107324116017 9.124557504468543 3 2.3488972400439843 3.9718983973089665 4 1.074238323479122 2.421996389122412 5 0.5860235581334017 1.6515736204873814 6 0.3753094928774865 1.269268955526565 7 0.26052745638326047 1.0279320272449692 8 0.1807333624630377 0.8149691585415435 9 0.12873130371916464 0.6530396266923146 >10 0.7969979537913982 8.324270648932899 >50 0.06878367787328163 2.720732448069207 >100 0.06565888170484784 7.944457433041261 >500 0.011859995549153101 4.680860073565674 >1k 0.006028285030504934 5.98061884921753 >5k 1.9657451186429133E-4 0.9384766563244452 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGT 8681 0.32156484767620225 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8424 0.312044957588334 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8305 0.3076369150962861 No Hit ATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATG 4703 0.17421028437060007 No Hit TCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTT 4296 0.1591340382003185 RNA PCR Primer, Index 23 (95% over 23bp) GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4275 0.15835614834878062 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 4127 0.1528738770141328 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 4081 0.15116992781552602 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3859 0.14294652081355425 No Hit ACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCC 3666 0.1357973426541824 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3435 0.12724055428726583 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 3320 0.12298068129074893 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3267 0.12101743547496288 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 2809 0.10405202823666077 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.408474776551141E-5 2 0.0 7.408474776551141E-5 0.0 0.0 7.408474776551141E-5 3 0.0 7.408474776551141E-5 0.0 0.0 7.408474776551141E-5 4 0.0 1.111271216482671E-4 0.0 3.7042373882755704E-5 7.408474776551141E-5 5 0.0 1.111271216482671E-4 0.0 3.7042373882755704E-5 7.408474776551141E-5 6 0.0 1.111271216482671E-4 0.0 3.7042373882755704E-5 1.111271216482671E-4 7 0.0 1.111271216482671E-4 0.0 7.408474776551141E-5 1.111271216482671E-4 8 0.0 1.111271216482671E-4 0.0 7.408474776551141E-5 1.111271216482671E-4 9 0.0 1.111271216482671E-4 0.0 1.111271216482671E-4 1.111271216482671E-4 10 0.0 1.111271216482671E-4 0.0 1.852118694137785E-4 1.111271216482671E-4 11 0.0 1.111271216482671E-4 0.0 2.222542432965342E-4 1.111271216482671E-4 12 0.0 1.111271216482671E-4 0.0 2.592966171792899E-4 1.111271216482671E-4 13 0.0 1.4816949553102281E-4 0.0 2.592966171792899E-4 1.111271216482671E-4 14 0.0 1.852118694137785E-4 0.0 2.9633899106204563E-4 1.4816949553102281E-4 15 0.0 2.222542432965342E-4 0.0 3.333813649448013E-4 2.222542432965342E-4 16 0.0 2.222542432965342E-4 0.0 3.70423738827557E-4 2.222542432965342E-4 17 0.0 2.222542432965342E-4 0.0 4.445084865930684E-4 2.222542432965342E-4 18 0.0 2.222542432965342E-4 0.0 5.185932343585798E-4 2.222542432965342E-4 19 0.0 2.222542432965342E-4 0.0 6.297203560068469E-4 2.222542432965342E-4 20 0.0 2.222542432965342E-4 0.0 6.667627298896026E-4 2.222542432965342E-4 21 0.0 2.222542432965342E-4 0.0 7.40847477655114E-4 2.222542432965342E-4 22 0.0 2.222542432965342E-4 0.0 0.001000144094834404 2.222542432965342E-4 23 0.0 2.222542432965342E-4 0.0 0.0012964830858964494 2.222542432965342E-4 24 0.0 2.222542432965342E-4 0.0 0.001963245815786052 2.222542432965342E-4 25 0.0 2.592966171792899E-4 0.0 0.0022966271807308533 2.222542432965342E-4 26 0.0 2.592966171792899E-4 0.0 0.003222686527799746 2.592966171792899E-4 27 0.0 2.592966171792899E-4 0.0 0.00577861032570989 2.592966171792899E-4 28 0.0 2.592966171792899E-4 0.0 0.012001729138012847 2.592966171792899E-4 29 0.0 2.592966171792899E-4 0.0 0.020558517504929413 2.592966171792899E-4 30 0.0 2.592966171792899E-4 0.0 0.03481983144979036 2.592966171792899E-4 31 0.0 2.592966171792899E-4 0.0 0.07512193423422855 2.592966171792899E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACCGA 25 0.0054976405 29.6 6 CTTATAC 1440 0.0 25.565971 1 TATACAC 1505 0.0 25.44518 3 TTATACA 1570 0.0 23.802547 2 GCCGTCT 780 0.0 21.583334 36 CAAGACG 970 0.0 18.690722 4 AAGACGG 1005 0.0 17.67164 5 TACACAT 2225 0.0 17.294382 5 CCGTCTT 1175 0.0 16.217022 37 ATACACA 2385 0.0 16.056604 4 TGCCGTC 1035 0.0 15.908212 35 CGCAAGA 1095 0.0 15.712328 2 ATGCCGT 1055 0.0 15.606634 34 TATGCCG 1080 0.0 15.587963 33 ATACCGT 755 0.0 15.437087 6 TACACCG 120 1.9377567E-6 15.416666 5 TACCGTC 720 0.0 15.159722 7 GCGCAAG 1175 0.0 15.114894 1 ACACATC 2635 0.0 15.094876 6 ACGGACC 1135 0.0 14.832599 8 >>END_MODULE