##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727424.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4583175 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.239957671265007 31.0 31.0 34.0 30.0 34.0 2 31.53651911611492 31.0 31.0 34.0 30.0 34.0 3 31.65790440033383 31.0 31.0 34.0 30.0 34.0 4 35.442461175931534 37.0 35.0 37.0 33.0 37.0 5 35.22758568023259 37.0 35.0 37.0 32.0 37.0 6 35.216025789981835 37.0 35.0 37.0 32.0 37.0 7 35.14226535098485 37.0 35.0 37.0 32.0 37.0 8 35.1267328871361 37.0 35.0 37.0 32.0 37.0 9 36.75769264756419 39.0 37.0 39.0 32.0 39.0 10 36.527361490669676 39.0 35.0 39.0 32.0 39.0 11 36.638378634898295 39.0 35.0 39.0 32.0 39.0 12 36.47110551091765 38.0 35.0 39.0 32.0 39.0 13 36.586417494422534 39.0 35.0 39.0 32.0 39.0 14 37.69072684329095 39.0 37.0 41.0 32.0 41.0 15 37.642599507983 39.0 36.0 41.0 32.0 41.0 16 37.610024709944526 39.0 36.0 41.0 32.0 41.0 17 37.49375160232808 39.0 36.0 41.0 32.0 41.0 18 37.49792971029908 39.0 36.0 41.0 32.0 41.0 19 37.4992377554861 39.0 36.0 41.0 32.0 41.0 20 37.45941579800029 39.0 36.0 41.0 32.0 41.0 21 37.39904389424362 39.0 36.0 41.0 31.0 41.0 22 37.32468627098027 39.0 36.0 41.0 31.0 41.0 23 37.20962760531727 39.0 36.0 41.0 31.0 41.0 24 37.16443491684258 39.0 36.0 41.0 31.0 41.0 25 37.06955942114364 39.0 36.0 41.0 31.0 41.0 26 36.87560217534788 39.0 36.0 40.0 30.0 41.0 27 36.81305405095812 39.0 36.0 40.0 30.0 41.0 28 36.68555182815406 39.0 35.0 40.0 30.0 41.0 29 36.558466128829906 39.0 35.0 40.0 30.0 41.0 30 36.68442902572998 39.0 35.0 40.0 30.0 41.0 31 36.6741719441217 39.0 35.0 40.0 30.0 41.0 32 36.654958407654085 39.0 35.0 40.0 30.0 41.0 33 36.55296688431055 39.0 35.0 40.0 30.0 41.0 34 36.530688223775 39.0 35.0 40.0 30.0 41.0 35 36.446504879259464 39.0 35.0 40.0 30.0 41.0 36 36.37572359772429 38.0 35.0 40.0 30.0 41.0 37 36.302638672972336 38.0 35.0 40.0 30.0 41.0 38 36.194288239048255 38.0 35.0 40.0 29.0 41.0 39 36.09024682670856 38.0 35.0 40.0 29.0 41.0 40 35.97302634090996 38.0 35.0 40.0 28.0 41.0 41 35.8434089904924 38.0 34.0 40.0 28.0 41.0 42 35.73789938197865 38.0 34.0 40.0 27.0 41.0 43 35.580667768522915 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 6.0 14 9.0 15 36.0 16 105.0 17 231.0 18 340.0 19 715.0 20 1421.0 21 2733.0 22 5091.0 23 8791.0 24 14542.0 25 22718.0 26 34586.0 27 49966.0 28 69879.0 29 95123.0 30 124127.0 31 156655.0 32 193602.0 33 236473.0 34 291202.0 35 356341.0 36 444090.0 37 571167.0 38 839274.0 39 1063950.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.04216509297594 19.32614399406525 11.926819290120932 26.704871622837878 2 18.73378171245916 21.693236675448787 33.192252095981495 26.380729516110556 3 20.39291539162262 23.6592318643735 29.450653749856816 26.49719899414707 4 14.977390128022606 16.234662651982525 33.70890267118319 35.07904454881169 5 14.93903243930245 36.25840165387532 33.80985888603424 14.992707020787991 6 35.172691420249066 34.63369825503062 15.49855722288588 14.695053101834427 7 28.849803902316623 30.46859436962368 21.241693803967774 19.439907924091923 8 27.934477736503627 33.011460395904585 19.931292171911394 19.122769695680397 9 26.853262203603396 13.793036486714996 18.890703497029897 40.46299781265171 10 17.181779006911146 26.369012747713107 32.56727050570838 23.881937739667368 11 37.002078253612396 21.083288331778736 20.678481620274155 21.236151794334713 12 21.793712873717457 25.46778161427395 28.87208103552668 23.866424476481914 13 30.78813268094716 18.918129899032877 24.459310412541523 25.83442700747844 14 22.94350532109291 20.41434158634571 24.124106105483644 32.51804698707774 15 26.074740763771842 26.98371761933594 21.293186491896993 25.648355124995227 16 26.00127640773045 25.21383102325353 23.92692838479875 24.857964184217273 17 24.744374805675104 26.25060138441146 24.46005225635067 24.544971553562757 18 25.641591254970624 23.85431496724432 25.656428131153618 24.847665646631427 19 25.255505190179296 25.44148979692026 24.971051727241488 24.331953285658958 20 25.13953754766074 24.147496004407426 25.126991659711884 25.585974788219957 21 25.757908000458198 24.872822879335832 24.816617301324957 24.552651818881017 22 25.318758284377097 24.884692380282228 24.715093794149254 25.08145554119142 23 24.277165938459692 24.185613684836387 25.322685692778478 26.214534683925443 24 24.964615141250334 25.658239102805368 24.835730688878343 24.54141506706595 25 25.29979762937265 24.831017798796687 24.3080179133461 25.561166658484563 26 25.456653957136698 25.251381411357848 24.852094890550763 24.439869740954688 27 25.886792452830186 24.69224936861455 24.300926759288046 25.120031419267214 28 24.80908976855564 24.721661293753787 25.556628319887416 24.91262061780316 29 24.764644596813344 24.918599006147485 25.30121586018426 25.015540536854907 30 24.58376562099418 25.45002100072548 25.646936894183618 24.319276484096726 31 25.90282937046916 24.76124084286548 24.172631418176262 25.163298368489095 32 24.348797503913772 24.97545915222526 24.70352975830074 25.972213585560226 33 24.39697371363738 24.90147114173035 25.295586574808947 25.405968569823322 34 25.46998532676583 24.7378509439417 25.048814413588833 24.743349315703632 35 25.282124291566436 25.12310788918163 25.762140873957463 23.832626945294475 36 24.841359974253656 25.43247857653264 24.78683445428115 24.939326994932554 37 25.12000960033165 25.09912887899764 25.191553890043473 24.589307630627243 38 24.663011994959827 24.57423074615305 25.808658844578268 24.95409841430886 39 25.364578049059876 24.112716621119638 24.828181337173465 25.694523992647017 40 25.176302454084777 24.80239135533773 25.876624828857725 24.14468136171977 41 24.395664577503588 24.82706857145974 25.537754940625224 25.23951191041145 42 25.850114822148402 24.980390231662547 25.537994948916413 23.631499997272634 43 25.077833597887928 23.841005416550754 25.681214441953447 25.39994654360787 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 177.0 1 228.5 2 280.0 3 732.5 4 1185.0 5 1185.0 6 1758.5 7 2332.0 8 2094.5 9 1857.0 10 2543.5 11 3230.0 12 3230.0 13 5720.0 14 8210.0 15 12272.0 16 16334.0 17 15763.5 18 15193.0 19 15193.0 20 18917.0 21 22641.0 22 22251.5 23 21862.0 24 27804.0 25 33746.0 26 33746.0 27 41976.0 28 50206.0 29 57791.0 30 65376.0 31 76013.5 32 86651.0 33 86651.0 34 103775.5 35 120900.0 36 144567.0 37 168234.0 38 192880.0 39 217526.0 40 217526.0 41 234471.5 42 251417.0 43 266185.0 44 280953.0 45 308093.5 46 335234.0 47 335234.0 48 385928.0 49 436622.0 50 446161.5 51 455701.0 52 411743.0 53 367785.0 54 367785.0 55 362107.5 56 356430.0 57 343041.0 58 329652.0 59 306357.0 60 283062.0 61 283062.0 62 241249.0 63 199436.0 64 175659.0 65 151882.0 66 129763.0 67 107644.0 68 107644.0 69 88902.0 70 70160.0 71 60981.5 72 51803.0 73 39021.5 74 26240.0 75 26240.0 76 20909.0 77 15578.0 78 13276.5 79 10975.0 80 8970.0 81 6965.0 82 6965.0 83 5830.0 84 4695.0 85 3948.5 86 3202.0 87 2089.0 88 976.0 89 976.0 90 688.0 91 400.0 92 298.5 93 197.0 94 204.0 95 211.0 96 211.0 97 109.0 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4583175.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.13121328209828 #Duplication Level Percentage of deduplicated Percentage of total 1 82.04950239615442 42.7734010910396 2 10.098673631545488 10.529122179047997 3 3.182959451240138 4.977946140626104 4 1.4537547180279506 3.031439890614869 5 0.7921544653035649 2.064798669155333 6 0.4969515864796814 1.5544013487389625 7 0.35205527050185487 1.2847147875533298 8 0.24878707867928315 1.03756578083679 9 0.1841350284184543 0.8639264195268901 >10 0.993057417622272 9.300991570925365 >50 0.06973966059502665 2.5314468691098746 >100 0.05829302329205127 6.352440524420048 >500 0.010992116791286805 4.140191599978808 >1k 0.008567999282492307 7.974475080307883 >5k 2.5077071070708844E-4 0.8323131494373159 >10k+ 1.2538535535354422E-4 0.7508248986808876 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTCGT 12146 0.26501279135097394 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 11282 0.24616123102434448 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 11032 0.2407064971335373 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7925 0.17291506433858625 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7215 0.15742362008869398 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6629 0.14463772384864204 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 5653 0.12334244273893098 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5428 0.11843318223720455 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5350 0.11673130526327273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.181893556322855E-5 2 0.0 2.181893556322855E-5 0.0 0.0 2.181893556322855E-5 3 0.0 2.181893556322855E-5 0.0 0.0 2.181893556322855E-5 4 0.0 4.36378711264571E-5 0.0 6.545680668968565E-5 2.181893556322855E-5 5 0.0 4.36378711264571E-5 0.0 1.0909467781614274E-4 2.181893556322855E-5 6 2.181893556322855E-5 4.36378711264571E-5 0.0 1.0909467781614274E-4 4.36378711264571E-5 7 2.181893556322855E-5 6.545680668968565E-5 0.0 1.0909467781614274E-4 4.36378711264571E-5 8 2.181893556322855E-5 6.545680668968565E-5 0.0 1.0909467781614274E-4 4.36378711264571E-5 9 2.181893556322855E-5 1.309136133793713E-4 0.0 1.309136133793713E-4 4.36378711264571E-5 10 2.181893556322855E-5 1.309136133793713E-4 0.0 1.9637042006905692E-4 6.545680668968565E-5 11 2.181893556322855E-5 1.309136133793713E-4 0.0 1.9637042006905692E-4 6.545680668968565E-5 12 2.181893556322855E-5 1.5273254894259983E-4 0.0 1.9637042006905692E-4 8.72757422529142E-5 13 2.181893556322855E-5 1.5273254894259983E-4 0.0 1.9637042006905692E-4 8.72757422529142E-5 14 2.181893556322855E-5 1.5273254894259983E-4 0.0 2.4000829119551401E-4 1.0909467781614274E-4 15 2.181893556322855E-5 1.5273254894259983E-4 0.0 2.4000829119551401E-4 1.0909467781614274E-4 16 4.36378711264571E-5 1.5273254894259983E-4 0.0 3.0546509788519966E-4 1.0909467781614274E-4 17 4.36378711264571E-5 1.5273254894259983E-4 0.0 3.491029690116568E-4 1.0909467781614274E-4 18 4.36378711264571E-5 1.5273254894259983E-4 0.0 3.9274084013811385E-4 1.0909467781614274E-4 19 4.36378711264571E-5 1.5273254894259983E-4 0.0 4.8001658239102803E-4 1.0909467781614274E-4 20 4.36378711264571E-5 1.5273254894259983E-4 0.0 5.454733890807137E-4 1.5273254894259983E-4 21 4.36378711264571E-5 1.5273254894259983E-4 0.0 6.109301957703993E-4 1.745514845058284E-4 22 4.36378711264571E-5 1.5273254894259983E-4 0.0 8.509384869659133E-4 1.745514845058284E-4 23 4.36378711264571E-5 1.745514845058284E-4 0.0 0.001112765713724656 1.745514845058284E-4 24 4.36378711264571E-5 1.745514845058284E-4 0.0 0.0015491444249892269 1.9637042006905692E-4 25 4.36378711264571E-5 1.745514845058284E-4 0.0 0.001876428458437655 1.9637042006905692E-4 26 4.36378711264571E-5 1.745514845058284E-4 0.0 0.0023782639763919116 1.9637042006905692E-4 27 4.36378711264571E-5 1.745514845058284E-4 0.0 0.003861951594691453 1.9637042006905692E-4 28 4.36378711264571E-5 1.745514845058284E-4 0.0 0.007920273609451963 1.9637042006905692E-4 29 4.36378711264571E-5 1.745514845058284E-4 0.0 0.013462283242512014 1.9637042006905692E-4 30 4.36378711264571E-5 1.9637042006905692E-4 0.0 0.023368079988217775 1.9637042006905692E-4 31 4.36378711264571E-5 1.9637042006905692E-4 0.0 0.05240908322287497 2.1818935563228548E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2135 0.0 25.908665 3 CTTATAC 2005 0.0 25.650871 1 TTATACA 2235 0.0 23.67338 2 TACACAT 2805 0.0 19.588234 5 ATACACA 3120 0.0 18.677885 4 ATCTCCG 3070 0.0 17.174267 10 AAGACGG 1400 0.0 16.65 5 GCCGTCT 745 0.0 16.637585 36 CAAGACG 1455 0.0 16.402061 4 ACACATC 3385 0.0 16.395864 6 ACATCTC 3520 0.0 15.767045 8 CACGAGA 3475 0.0 15.2259 21 CGAGACA 3480 0.0 15.150861 23 CGCAATA 960 0.0 15.031251 36 CCCACGA 3550 0.0 14.956338 19 TATGCCG 780 0.0 14.942308 33 TCTCCGA 3590 0.0 14.892758 11 ATCTCGT 3410 0.0 14.865103 37 TCCGAGC 3705 0.0 14.530364 13 GCCCACG 3695 0.0 14.519621 18 >>END_MODULE