##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727420.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1151012 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.009629786657307 31.0 31.0 33.0 28.0 34.0 2 31.313403335499544 31.0 31.0 34.0 28.0 34.0 3 31.42579399693487 31.0 31.0 34.0 28.0 34.0 4 35.23348583681143 37.0 35.0 37.0 33.0 37.0 5 35.008046831831464 35.0 35.0 37.0 32.0 37.0 6 35.03796919580334 37.0 35.0 37.0 32.0 37.0 7 34.960919608136145 37.0 35.0 37.0 32.0 37.0 8 34.95370161214653 37.0 35.0 37.0 32.0 37.0 9 36.54730272143123 38.0 35.0 39.0 32.0 39.0 10 36.281981421566414 38.0 35.0 39.0 32.0 39.0 11 36.41899910687291 38.0 35.0 39.0 32.0 39.0 12 36.24492533527018 38.0 35.0 39.0 32.0 39.0 13 36.36187633143703 38.0 35.0 39.0 32.0 39.0 14 37.40780461020389 39.0 36.0 41.0 32.0 41.0 15 37.349812165294544 39.0 36.0 41.0 32.0 41.0 16 37.322106980639646 39.0 36.0 41.0 32.0 41.0 17 37.25557856912005 39.0 36.0 41.0 31.0 41.0 18 37.239355454156865 39.0 36.0 41.0 31.0 41.0 19 37.233515376034305 39.0 36.0 40.0 31.0 41.0 20 37.18478521509767 39.0 36.0 40.0 31.0 41.0 21 37.11491539619048 39.0 36.0 40.0 31.0 41.0 22 37.040759783564376 39.0 36.0 40.0 31.0 41.0 23 36.947633908247695 39.0 36.0 40.0 31.0 41.0 24 36.87822281609575 39.0 36.0 40.0 30.0 41.0 25 36.77467741431019 39.0 35.0 40.0 30.0 41.0 26 36.566449350658374 39.0 35.0 40.0 30.0 41.0 27 36.48361268170966 38.0 35.0 40.0 30.0 41.0 28 36.32881846583702 38.0 35.0 40.0 30.0 41.0 29 36.18884425184099 38.0 35.0 40.0 29.0 41.0 30 36.3063938516714 38.0 35.0 40.0 30.0 41.0 31 36.30124968288776 38.0 35.0 40.0 30.0 41.0 32 36.27039770219598 38.0 35.0 40.0 30.0 41.0 33 36.17053340886107 38.0 35.0 40.0 29.0 41.0 34 36.1343313536262 38.0 35.0 40.0 29.0 41.0 35 36.035906663006116 38.0 35.0 40.0 29.0 41.0 36 35.95351916400524 38.0 35.0 40.0 28.0 41.0 37 35.85713963016893 38.0 34.0 40.0 28.0 41.0 38 35.743841940831196 38.0 34.0 40.0 27.0 41.0 39 35.648439807751785 38.0 34.0 40.0 27.0 41.0 40 35.51425267503727 38.0 34.0 40.0 27.0 41.0 41 35.36084506503842 38.0 34.0 40.0 26.0 41.0 42 35.250694171737564 38.0 33.0 40.0 26.0 41.0 43 35.09697813749987 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 6.0 15 10.0 16 46.0 17 67.0 18 125.0 19 256.0 20 474.0 21 943.0 22 1727.0 23 2865.0 24 4625.0 25 7333.0 26 10556.0 27 15041.0 28 20189.0 29 27160.0 30 34719.0 31 42803.0 32 52027.0 33 63248.0 34 76715.0 35 93487.0 36 115572.0 37 150260.0 38 220793.0 39 209962.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.81286728548443 20.601696593953843 12.879188053643228 25.7062480669185 2 19.70092405639559 22.588817492780265 32.581849711384415 25.128408739439728 3 21.38118455758932 24.24822677782682 29.0047367012681 25.365851963315762 4 16.229457208091663 16.89817308594524 33.31042595559386 33.56194375036924 5 15.2248629901339 36.46061031509662 33.40095498569954 14.913571709069931 6 35.053240105229136 34.80206983072288 15.36265477683986 14.782035287208126 7 28.69857134417365 30.602634898680463 21.454858854642698 19.243934902503188 8 27.50405729914197 33.42484700420152 19.93089559448555 19.140200102170958 9 26.823699492272883 13.927743585644633 19.31265703572161 39.93589988636087 10 17.436395102744367 26.45185280431481 32.44414480474574 23.667607288195082 11 36.84670533408861 21.54130452158622 20.521593171921754 21.090396972403415 12 21.65529116985748 25.830225922926953 28.916466552911697 23.598016354303862 13 30.784822399766465 19.25175410855838 24.448659093041602 25.51476439863355 14 23.01783126500853 20.631322696896294 24.341449090018173 32.009396948077 15 26.069232988014022 27.28955041302784 21.562155737733406 25.079060861224733 16 25.566631798799666 25.558812592744474 24.230677004236274 24.64387860421959 17 24.51668618572178 26.3770490663868 24.71329577797625 24.39296896991517 18 25.178191017991125 24.01834211980414 26.111977981115746 24.69148888108899 19 25.067679572411063 25.61789103849482 25.464200199476632 23.850229189617483 20 25.07914774129201 24.342231010623692 25.450907549182805 25.127713698901488 21 25.53431241377153 25.122935295201092 25.21433312597957 24.128419165047802 22 25.251344034640823 24.954996125149 25.186792144651836 24.606867695558343 23 24.062216553780498 24.57637279194309 25.74143449416687 25.619976160109537 24 24.707040413132095 25.848818257324858 25.258468200157775 24.185673129385272 25 25.18375134229704 24.79244351926826 24.70565033205562 25.318154806379084 26 25.018418574263347 25.557161871466157 25.33023113573099 24.09418841853951 27 25.602426386518996 24.7455282829371 24.790532157788103 24.8615131727558 28 24.64830948765087 25.01164192901551 25.987565724770896 24.352482858562727 29 24.654477972427742 24.79305167973922 25.8239705580828 24.728499789750238 30 24.217992514413403 25.657421469107184 26.037956163793254 24.08662985268616 31 25.433184015457698 25.057253964337473 24.679586311871642 24.829975708333187 32 24.09688170062519 25.16481148763002 25.10999016517638 25.62831664656841 33 24.378981279083103 24.947611319430205 25.750296261029426 24.923111140457266 34 25.10929512463814 24.92319802052455 25.44717170628977 24.520335148547538 35 25.124586016479412 25.157339801843943 25.93813096648862 23.779943215188027 36 24.468293988246863 25.50659767230924 25.33466201916227 24.69044632028163 37 24.939705233307734 25.196435832119906 25.48183685313446 24.3820220814379 38 24.62007346578489 24.671940865951004 26.014498545627674 24.69348712263643 39 25.211726723961174 24.250659419710654 25.16020684406418 25.37740701226399 40 24.902259924310087 25.089312709163764 26.00520237842872 24.00322498809743 41 24.133892609286438 24.993744635155846 26.098077170350958 24.774285585206755 42 25.545172422181523 25.284619100409035 25.73300712764072 23.437201349768724 43 24.910600410768957 24.167775835525607 25.83622064756927 25.085403106136166 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 100.5 2 112.0 3 250.5 4 389.0 5 389.0 6 612.5 7 836.0 8 784.0 9 732.0 10 994.5 11 1257.0 12 1257.0 13 2257.5 14 3258.0 15 4844.5 16 6431.0 17 5916.0 18 5401.0 19 5401.0 20 6444.5 21 7488.0 22 6989.5 23 6491.0 24 7984.5 25 9478.0 26 9478.0 27 11608.5 28 13739.0 29 15646.0 30 17553.0 31 20203.5 32 22854.0 33 22854.0 34 27382.5 35 31911.0 36 37862.0 37 43813.0 38 49315.0 39 54817.0 40 54817.0 41 58915.0 42 63013.0 43 66867.5 44 70722.0 45 77889.0 46 85056.0 47 85056.0 48 97234.5 49 109413.0 50 109154.5 51 108896.0 52 100602.5 53 92309.0 54 92309.0 55 88905.5 56 85502.0 57 83419.5 58 81337.0 59 75194.5 60 69052.0 61 69052.0 62 59065.0 63 49078.0 64 43205.0 65 37332.0 66 31687.0 67 26042.0 68 26042.0 69 21578.0 70 17114.0 71 14943.5 72 12773.0 73 9544.0 74 6315.0 75 6315.0 76 5007.0 77 3699.0 78 3128.0 79 2557.0 80 2092.5 81 1628.0 82 1628.0 83 1404.5 84 1181.0 85 1011.5 86 842.0 87 554.5 88 267.0 89 267.0 90 195.0 91 123.0 92 87.0 93 51.0 94 51.5 95 52.0 96 52.0 97 28.5 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1151012.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.577949218444175 #Duplication Level Percentage of deduplicated Percentage of total 1 87.40977667789384 53.82514789466892 2 7.465402083766724 9.194083008189093 3 2.08479161323831 3.851315762730809 4 0.9307493442552809 2.292545434226076 5 0.49809181235365274 1.5335736163618023 6 0.322601457911757 1.1919081715851736 7 0.21250100770967725 0.9159763383130305 8 0.15092768957205593 0.7435054083300131 9 0.11411827157796811 0.6324452218912266 >10 0.6529158846754091 7.4972204575618315 >50 0.07158500788371235 3.1130515525037277 >100 0.07805492138252927 10.312732679271715 >500 0.006504574630628095 2.816307156382889 >1k 0.0019796531484520285 2.080187297983775 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2792 0.24256914784554806 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 2740 0.23805138434699205 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 2730 0.23718258367419282 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2725 0.23674818333779316 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1890 0.16420332715905656 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 1656 0.1438733914155543 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 1532 0.13310026307284373 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1503 0.13058074112172594 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.68800672799241E-5 0.0 5 0.0 0.0 0.0 8.68800672799241E-5 0.0 6 0.0 0.0 0.0 8.68800672799241E-5 0.0 7 0.0 0.0 0.0 8.68800672799241E-5 0.0 8 0.0 0.0 0.0 8.68800672799241E-5 8.68800672799241E-5 9 0.0 8.68800672799241E-5 0.0 8.68800672799241E-5 8.68800672799241E-5 10 0.0 8.68800672799241E-5 0.0 8.68800672799241E-5 8.68800672799241E-5 11 0.0 8.68800672799241E-5 0.0 8.68800672799241E-5 8.68800672799241E-5 12 0.0 8.68800672799241E-5 0.0 8.68800672799241E-5 8.68800672799241E-5 13 0.0 8.68800672799241E-5 0.0 8.68800672799241E-5 8.68800672799241E-5 14 0.0 1.737601345598482E-4 0.0 8.68800672799241E-5 8.68800672799241E-5 15 0.0 1.737601345598482E-4 0.0 8.68800672799241E-5 8.68800672799241E-5 16 0.0 1.737601345598482E-4 0.0 8.68800672799241E-5 8.68800672799241E-5 17 0.0 1.737601345598482E-4 0.0 1.737601345598482E-4 8.68800672799241E-5 18 0.0 1.737601345598482E-4 0.0 1.737601345598482E-4 8.68800672799241E-5 19 0.0 1.737601345598482E-4 0.0 2.606402018397723E-4 2.606402018397723E-4 20 0.0 1.737601345598482E-4 0.0 4.344003363996205E-4 2.606402018397723E-4 21 0.0 1.737601345598482E-4 0.0 6.950405382393928E-4 2.606402018397723E-4 22 0.0 2.606402018397723E-4 0.0 9.556807400791651E-4 2.606402018397723E-4 23 0.0 2.606402018397723E-4 0.0 0.0011294408746390133 2.606402018397723E-4 24 0.0 2.606402018397723E-4 0.0 0.0018244814128784061 2.606402018397723E-4 25 0.0 2.606402018397723E-4 0.0 0.0023457618165579506 2.606402018397723E-4 26 0.0 2.606402018397723E-4 0.0 0.0028670422202374955 2.606402018397723E-4 27 0.0 2.606402018397723E-4 0.0 0.004952163834955674 2.606402018397723E-4 28 0.0 2.606402018397723E-4 0.0 0.011294408746390133 2.606402018397723E-4 29 0.0 2.606402018397723E-4 0.0 0.019895535407102618 2.606402018397723E-4 30 0.0 2.606402018397723E-4 0.0 0.03761906913220714 2.606402018397723E-4 31 0.0 2.606402018397723E-4 0.0 0.08844390849096273 2.606402018397723E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACTC 110 3.851528E-8 18.5 5 TATACAC 255 0.0 18.137255 3 TACTATA 150 2.5102054E-10 17.266666 2 TACCGAC 65 0.0015799364 17.076921 7 GCGGGTA 155 4.0017767E-10 16.709679 23 ACCCGTT 225 0.0 15.622222 30 AACCCGT 230 0.0 15.282609 29 AAGACGG 405 0.0 15.074074 5 CGGGTAA 160 1.096123E-8 15.031251 24 TCTAGCG 210 9.094947E-12 14.97619 28 CGCTTCG 285 0.0 14.929826 32 TACCGTC 310 0.0 14.919355 7 GTAATAG 75 0.0041044103 14.8 3 CGTAGAC 75 0.0041044103 14.8 3 CAAGACG 415 0.0 14.710843 4 CGAACGA 230 1.8189894E-12 14.478261 16 TAACGAA 230 1.8189894E-12 14.478261 13 ACGGACC 410 0.0 14.439024 8 TTCGGGC 295 0.0 14.42373 35 ATCTCCG 285 0.0 14.280703 10 >>END_MODULE