##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727418.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1306293 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.606790360202496 31.0 30.0 31.0 27.0 34.0 2 30.908838981759835 31.0 31.0 34.0 27.0 34.0 3 30.975746635708834 31.0 31.0 34.0 27.0 34.0 4 34.804858481213635 35.0 35.0 37.0 32.0 37.0 5 34.544455187312494 35.0 35.0 37.0 30.0 37.0 6 34.68447813775317 35.0 35.0 37.0 31.0 37.0 7 34.63289399851335 35.0 35.0 37.0 30.0 37.0 8 34.63667339563176 35.0 35.0 37.0 30.0 37.0 9 36.18595062516602 38.0 35.0 39.0 32.0 39.0 10 35.857206614442546 37.0 35.0 39.0 30.0 39.0 11 36.053211645473105 37.0 35.0 39.0 31.0 39.0 12 35.8311381902835 37.0 35.0 39.0 30.0 39.0 13 35.987779923799636 37.0 35.0 39.0 30.0 39.0 14 36.924081350814866 38.0 36.0 40.0 31.0 41.0 15 36.88118362419457 38.0 36.0 40.0 31.0 41.0 16 36.83898252535993 38.0 36.0 40.0 31.0 41.0 17 36.756901399609426 38.0 36.0 40.0 31.0 41.0 18 36.7337312532487 38.0 36.0 40.0 31.0 41.0 19 36.7206683339802 38.0 35.0 40.0 30.0 41.0 20 36.6757557454568 38.0 35.0 40.0 30.0 41.0 21 36.5839746519349 38.0 35.0 40.0 30.0 41.0 22 36.5194079735557 38.0 35.0 40.0 30.0 41.0 23 36.41220537811961 38.0 35.0 40.0 30.0 41.0 24 36.32314878821214 38.0 35.0 40.0 30.0 41.0 25 36.21123897931015 38.0 34.0 40.0 29.0 41.0 26 35.97147653704031 38.0 34.0 40.0 29.0 41.0 27 35.878722461193625 38.0 34.0 40.0 28.0 41.0 28 35.69426460985399 38.0 34.0 40.0 27.0 41.0 29 35.53387716232116 38.0 34.0 40.0 27.0 41.0 30 35.66358083523375 38.0 34.0 40.0 27.0 41.0 31 35.66732042505012 38.0 34.0 40.0 27.0 41.0 32 35.622395588126096 38.0 34.0 40.0 27.0 41.0 33 35.510004263974466 38.0 34.0 40.0 27.0 41.0 34 35.47192475195075 38.0 34.0 40.0 27.0 41.0 35 35.35274628280179 38.0 34.0 40.0 27.0 41.0 36 35.25228413533564 38.0 34.0 40.0 26.0 41.0 37 35.16779390228685 38.0 33.0 40.0 26.0 41.0 38 35.05508335419389 38.0 33.0 40.0 26.0 41.0 39 34.95112046072359 38.0 33.0 40.0 25.0 41.0 40 34.801467970815125 38.0 33.0 40.0 25.0 41.0 41 34.621855127448434 37.0 33.0 40.0 24.0 41.0 42 34.49791662360588 37.0 33.0 40.0 24.0 41.0 43 34.331100296794055 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 9.0 13 7.0 14 21.0 15 43.0 16 93.0 17 169.0 18 247.0 19 493.0 20 904.0 21 1672.0 22 2934.0 23 4599.0 24 7219.0 25 10570.0 26 15242.0 27 20837.0 28 27886.0 29 36050.0 30 45016.0 31 55205.0 32 67069.0 33 80183.0 34 96631.0 35 117168.0 36 147186.0 37 191626.0 38 252488.0 39 124724.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.713831429855325 22.8798592658768 13.776082394991015 23.63022690927686 2 22.868912257816586 23.763964133620867 30.05550822059063 23.31161538797192 3 24.465567832025435 24.29271227817955 27.950697125376927 23.29102276441809 4 19.50320487057651 17.97131271468193 31.285706958546054 31.239775456195506 5 15.623600524537757 37.34070380841052 32.77511247476638 14.260583192285345 6 35.458890157108705 35.29039809598613 14.693640706947065 14.55707103995811 7 28.91625385728929 30.91894391227695 21.137447724208887 19.027354506224867 8 27.84130359727871 33.68463277381108 19.600273445543994 18.87379018336621 9 27.02594287805263 13.699529891073443 18.87325431583879 40.40127291503514 10 17.610367658710565 26.7422392985341 32.0455671124319 23.601825930323443 11 37.702108179405386 21.222497556061313 19.957467428823396 21.117926835709905 12 21.64169906751395 26.23400722502532 28.604302403825177 23.519991303635553 13 31.488953856447218 18.947586797142755 24.14159763544626 25.42186171096377 14 23.197399052126897 20.58787729858462 24.049504973233418 32.16521867605507 15 26.553920138896864 27.465966670570847 20.998275272086737 24.981837918445553 16 26.067275871492846 25.599693177564298 23.733419684557752 24.599611266385107 17 24.792523576257395 26.635678213080833 24.228561279896624 24.34323693076515 18 25.600458702603472 23.736634889722293 25.973039739170307 24.689866668503928 19 25.56899562349335 25.665145568413823 24.977857188241842 23.78800161985098 20 25.504155652675166 24.052949835909708 25.078064415869942 25.364830095545184 21 26.064596533855728 25.268450493112955 24.431195757766446 24.235757215264876 22 25.63620872193298 25.281770628794614 24.60558236169068 24.47643828758173 23 24.405627221457973 24.30036752857131 25.615462993371317 25.6785422565994 24 24.996153236678143 25.853541280554975 25.05280208957715 24.097503393189736 25 25.53868083194199 24.69698605136826 24.340863803143705 25.423469313546043 26 25.346840257124548 25.479735403925456 24.907046122118086 24.266378216831903 27 26.171081066805073 24.51272417443866 24.447654546108723 24.868540212647545 28 25.32157793083175 24.647686238845342 25.75149679283285 24.279239037490058 29 25.030372205929297 24.670269227501027 25.574048088751912 24.725310477817764 30 24.803547136821525 25.310630922771537 25.52206893859188 24.363753001815063 31 26.087715390038834 25.052419327057557 24.220370161977442 24.639495120926163 32 24.67991484299464 24.935753311087176 24.780734490654087 25.603597355264096 33 24.807604419529156 24.686498358331555 25.522528253615384 24.983368968523905 34 25.633376279288033 24.618596287356663 25.221064493187978 24.52696294016733 35 25.79183996239741 25.052342774553644 25.58989445706285 23.5659228059861 36 25.006870587226604 25.603444250256256 24.75355835176335 24.63612681075379 37 25.54028843452426 25.08150927854624 24.99439252908804 24.383809757841465 38 25.08281067111284 24.406852061520652 25.7316696943182 24.778667573048313 39 25.802404207938036 24.106995903675514 24.703263356689504 25.387336531696945 40 25.511428140547338 24.944939611557285 25.418876163310987 24.12475608458439 41 24.665599524762055 24.872674047859096 25.5548334102686 24.906893017110253 42 26.262178546466984 25.266919443034602 25.13379463872194 23.33710737177647 43 25.723478576399017 24.07974321228086 25.44926750736626 24.74751070395386 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 118.0 1 132.5 2 147.0 3 250.5 4 354.0 5 354.0 6 598.0 7 842.0 8 786.0 9 730.0 10 1021.0 11 1312.0 12 1312.0 13 2540.0 14 3768.0 15 5262.5 16 6757.0 17 5992.5 18 5228.0 19 5228.0 20 6731.0 21 8234.0 22 7656.0 23 7078.0 24 8580.5 25 10083.0 26 10083.0 27 12246.5 28 14410.0 29 16333.0 30 18256.0 31 21218.0 32 24180.0 33 24180.0 34 29310.5 35 34441.0 36 41353.0 37 48265.0 38 54284.5 39 60304.0 40 60304.0 41 64975.5 42 69647.0 43 73878.5 44 78110.0 45 86811.5 46 95513.0 47 95513.0 48 110682.0 49 125851.0 50 125104.0 51 124357.0 52 114532.5 53 104708.0 54 104708.0 55 101516.5 56 98325.0 57 96105.0 58 93885.0 59 88248.5 60 82612.0 61 82612.0 62 69295.0 63 55978.0 64 49721.0 65 43464.0 66 37020.5 67 30577.0 68 30577.0 69 25544.0 70 20511.0 71 18452.5 72 16394.0 73 12280.5 74 8167.0 75 8167.0 76 6403.5 77 4640.0 78 3995.0 79 3350.0 80 2785.5 81 2221.0 82 2221.0 83 1838.0 84 1455.0 85 1329.0 86 1203.0 87 809.0 88 415.0 89 415.0 90 309.0 91 203.0 92 152.0 93 101.0 94 89.0 95 77.0 96 77.0 97 43.0 98 9.0 99 11.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1306293.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.150362304606006 #Duplication Level Percentage of deduplicated Percentage of total 1 88.01307906491787 52.94018593298745 2 7.044971187560812 8.475151387145864 3 1.9935791336144986 3.597435215094439 4 0.903188431618463 2.1730844556471767 5 0.5066880776122875 1.5238735721901713 6 0.30273870927466706 1.0925905827900007 7 0.20555149593321173 0.8654797866845504 8 0.15555687544900618 0.7485441933784155 9 0.10880665571999126 0.5890283786439006 >10 0.6005609540965523 6.697830472343412 >50 0.0687767915484956 2.9452400487700503 >100 0.08400956132269301 11.250775270131431 >500 0.008923615236798077 3.6136895375583697 >1k 0.0035694460947192316 3.487091166634931 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3251 0.24887219023603432 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 3110 0.23807828718365637 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2916 0.22322710142364693 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 2749 0.210442833269412 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 2401 0.1838025619060961 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 2371 0.18150598678856888 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 1999 0.1530284553312312 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 1772 0.13565103694194183 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 1502 0.11498186088419672 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGG 1443 0.11046526315305985 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1409 0.10786247801986232 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1407 0.10770937301202717 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 1390 0.10640798044542839 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 1383 0.10587211291800537 No Hit TATCTAGAGTCACCAAAGCCGCCGGCGCCCGACCCCCGGCCGG 1349 0.10326932778480784 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 1339 0.10250380274563212 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1335 0.1021975927299618 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 7.655250391757438E-5 0.0 6 0.0 0.0 0.0 7.655250391757438E-5 0.0 7 0.0 0.0 0.0 7.655250391757438E-5 0.0 8 0.0 0.0 0.0 7.655250391757438E-5 0.0 9 0.0 0.0 0.0 1.5310500783514877E-4 0.0 10 0.0 0.0 0.0 1.5310500783514877E-4 0.0 11 0.0 0.0 0.0 2.2965751175272315E-4 0.0 12 0.0 0.0 0.0 2.2965751175272315E-4 0.0 13 0.0 0.0 0.0 3.0621001567029754E-4 7.655250391757438E-5 14 0.0 0.0 0.0 3.0621001567029754E-4 1.5310500783514877E-4 15 0.0 0.0 0.0 3.0621001567029754E-4 1.5310500783514877E-4 16 0.0 0.0 0.0 3.8276251958787195E-4 1.5310500783514877E-4 17 0.0 0.0 0.0 4.593150235054463E-4 1.5310500783514877E-4 18 0.0 0.0 0.0 4.593150235054463E-4 1.5310500783514877E-4 19 0.0 0.0 0.0 6.889725352581695E-4 1.5310500783514877E-4 20 0.0 0.0 0.0 7.655250391757439E-4 1.5310500783514877E-4 21 0.0 0.0 0.0 7.655250391757439E-4 1.5310500783514877E-4 22 0.0 0.0 0.0 0.0010717350548460414 1.5310500783514877E-4 23 0.0 0.0 0.0 0.0012248400626811901 2.2965751175272315E-4 24 0.0 0.0 0.0 0.001760707590104211 2.2965751175272315E-4 25 0.0 0.0 0.0 0.0019138125979393597 2.2965751175272315E-4 26 0.0 0.0 0.0 0.0026793376371151037 2.2965751175272315E-4 27 0.0 0.0 0.0 0.0048228077468071865 2.2965751175272315E-4 28 0.0 0.0 0.0 0.010870455556295563 2.2965751175272315E-4 29 0.0 0.0 0.0 0.017147760877536663 2.2965751175272315E-4 30 0.0 0.0 0.0 0.029549266512183713 2.2965751175272315E-4 31 0.0 0.0 0.0 0.06445720829859763 2.2965751175272315E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTAA 35 8.8700466E-4 26.42857 33 ATCTACG 50 0.007035386 18.499998 28 CAAGACG 570 0.0 17.850876 4 AAGACGG 600 0.0 17.575 5 GTAAGAC 85 2.7235757E-5 17.411764 3 CGCAAGA 625 0.0 16.28 2 GTAGCAC 95 7.060854E-5 15.578948 3 AGGTTAT 310 0.0 15.5161295 1 ACGGACC 645 0.0 15.488372 8 CGGACCA 645 0.0 15.488372 9 ACCGTCG 420 0.0 15.416666 8 ACGAACG 230 0.0 15.282609 15 TATACTG 195 4.1836756E-11 15.179487 5 GCGCAAG 680 0.0 14.963236 1 GACGGAC 680 0.0 14.963236 7 TACCGTC 410 0.0 14.8902445 7 GCAAGAC 745 0.0 14.402684 3 TAACCTA 90 8.275082E-4 14.388888 5 ATACCGT 490 0.0 14.346938 6 CGTCGTA 440 0.0 14.295454 10 >>END_MODULE