##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727416.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2564242 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.380930504999135 33.0 31.0 34.0 31.0 34.0 2 32.511373731496484 34.0 31.0 34.0 31.0 34.0 3 32.59909439124701 34.0 31.0 34.0 31.0 34.0 4 36.1132178632126 37.0 35.0 37.0 35.0 37.0 5 35.93484117333699 37.0 35.0 37.0 35.0 37.0 6 35.96427287284118 37.0 35.0 37.0 35.0 37.0 7 35.934066285475396 37.0 35.0 37.0 35.0 37.0 8 35.89930279591396 37.0 35.0 37.0 35.0 37.0 9 37.73179598493434 39.0 37.0 39.0 35.0 39.0 10 37.571756097903396 39.0 37.0 39.0 35.0 39.0 11 37.67609414400045 39.0 37.0 39.0 35.0 39.0 12 37.6077000532711 39.0 37.0 39.0 35.0 39.0 13 37.68165680150313 39.0 37.0 39.0 35.0 39.0 14 38.89319104827079 40.0 38.0 41.0 36.0 41.0 15 38.83125890614068 40.0 38.0 41.0 35.0 41.0 16 38.813857272441524 40.0 38.0 41.0 35.0 41.0 17 38.77725698276528 40.0 38.0 41.0 35.0 41.0 18 38.76301027750111 40.0 38.0 41.0 35.0 41.0 19 38.81962193895896 40.0 38.0 41.0 35.0 41.0 20 38.77090071841893 40.0 38.0 41.0 35.0 41.0 21 38.723856406688604 40.0 38.0 41.0 35.0 41.0 22 38.671402699121224 40.0 38.0 41.0 34.0 41.0 23 38.60272041406388 40.0 38.0 41.0 34.0 41.0 24 38.558819331404756 40.0 38.0 41.0 34.0 41.0 25 38.44277451192204 40.0 38.0 41.0 34.0 41.0 26 38.3302784994552 40.0 38.0 41.0 34.0 41.0 27 38.235521842322214 40.0 38.0 41.0 34.0 41.0 28 38.13949892404851 40.0 38.0 41.0 34.0 41.0 29 38.044216575502624 40.0 37.0 41.0 33.0 41.0 30 37.958936013059606 40.0 37.0 41.0 33.0 41.0 31 37.84384352178928 40.0 37.0 41.0 33.0 41.0 32 37.72639165882159 40.0 37.0 41.0 33.0 41.0 33 37.604788471602916 40.0 37.0 41.0 33.0 41.0 34 37.48313341720477 40.0 36.0 41.0 33.0 41.0 35 37.38844578631814 40.0 36.0 41.0 33.0 41.0 36 37.2796795310271 40.0 36.0 41.0 32.0 41.0 37 37.16719989766956 40.0 36.0 41.0 32.0 41.0 38 37.04498990344905 39.0 36.0 41.0 31.0 41.0 39 36.91267477874553 39.0 36.0 41.0 31.0 41.0 40 36.76377892570202 39.0 35.0 41.0 31.0 41.0 41 36.628263245044735 39.0 35.0 41.0 30.0 41.0 42 36.47941184958362 39.0 35.0 41.0 30.0 41.0 43 34.873556006024394 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 12.0 11 17.0 12 19.0 13 7.0 14 9.0 15 11.0 16 16.0 17 35.0 18 54.0 19 145.0 20 267.0 21 610.0 22 1048.0 23 2038.0 24 3525.0 25 5561.0 26 8796.0 27 13306.0 28 19669.0 29 27180.0 30 35912.0 31 46371.0 32 59200.0 33 77083.0 34 104026.0 35 143831.0 36 213769.0 37 361737.0 38 677900.0 39 762084.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.710110044215796 18.474699345849572 13.640054253849677 24.175136356084955 2 16.15198565502008 22.211749125082576 38.148583480030354 23.487681739866986 3 18.367689165063204 23.752321348765054 31.659180373771274 26.220809112400467 4 12.75932614784408 15.853807869928033 36.31459121252986 35.072274769698026 5 13.767421327628204 38.30769482755528 34.77078216486588 13.154101679950644 6 32.97609975969507 37.726587428175655 15.420619426715575 13.876693385413702 7 27.88441964525969 31.501706937176756 22.20355957043056 18.410313847132993 8 26.861739258619117 36.86489028726618 19.711751074976544 16.56161937913816 9 26.05257226112044 14.058969473240046 19.49125706544078 40.39720120019874 10 14.722401395812096 28.726695842280098 34.87935226082406 21.67155050108375 11 35.74409123631857 21.882373036554274 22.66950623225109 19.704029494876067 12 20.45310076038065 26.62954588529476 32.18046502631187 20.73688832801272 13 31.241942063190603 19.818488270607844 25.658147709927537 23.281421956274016 14 20.860199622344535 20.442727324488093 29.178798256950788 29.51827479621658 15 23.91154968992786 29.25254324669824 23.81799377749838 23.01791328587551 16 22.679723676626466 27.041402488532672 26.058031964221783 24.220841870619076 17 22.781040167035716 27.403458799910464 27.707213281741737 22.108287751312083 18 22.78552492315468 26.145426211722604 28.410657028470794 22.658391836651923 19 24.00405265961637 26.319902723689886 28.372868083433623 21.30317653326012 20 22.992330677057783 26.674198457087904 28.241250240811905 22.092220625042412 21 22.63230225540335 26.780350684529775 28.41935355555365 22.167993504513227 22 22.766649949575744 26.56387345656143 28.164463416479414 22.505013177383415 23 22.244117364897697 26.377346599891897 28.394784891597595 22.98375114361281 24 22.353584412079673 26.523432655732183 28.55787402281064 22.565108909377507 25 22.677929774178878 26.36408732093149 28.52016307353206 22.43781983135757 26 22.400420865113354 26.712572370314504 28.693196663965416 22.19381010060673 27 22.799486163942404 26.981345754417873 28.238442393502645 21.980725688137078 28 22.43048823005005 27.06760906341913 28.30368584556372 22.1982168609671 29 22.29231874370672 27.1479446947675 28.429142023256777 22.13059453826901 30 22.16502966568678 27.30549612712061 28.378249790776376 22.151224416416234 31 22.307020944201053 26.523822634525136 28.44236230433789 22.72679411693592 32 21.889626642103202 27.044990293427844 28.40133653531921 22.664046529149743 33 22.117452252946485 26.57853665917647 28.508775692777828 22.795235395099215 34 22.201921659500158 26.57529983519496 28.905774104004223 22.317004401300657 35 22.21880774123503 26.745681569836233 28.553974234881107 22.481536454047628 36 21.945666594650586 26.480417994869438 28.8801524973072 22.693762913172783 37 21.88412794112256 26.31713387425992 28.673190751886914 23.12554743273061 38 21.69725010353937 26.43451749093884 29.16861981045471 22.69961259506708 39 21.64487595164575 26.391970804627647 29.17560043084857 22.787552812878037 40 21.679428072701405 26.362566403638972 29.405141948380848 22.552863575278774 41 21.400983214532793 26.207198852526396 29.521082643525848 22.870735289414963 42 21.060102751612366 26.4256649723388 29.241935823529918 23.272296452518912 43 20.861057575689035 25.88800121049417 29.29454396269931 23.956397251117483 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 802.0 1 884.5 2 967.0 3 3894.5 4 6822.0 5 6822.0 6 8453.0 7 10084.0 8 8957.5 9 7831.0 10 10210.5 11 12590.0 12 12590.0 13 19324.0 14 26058.0 15 41643.5 16 57229.0 17 44950.5 18 32672.0 19 32672.0 20 34108.5 21 35545.0 22 30467.0 23 25389.0 24 29952.0 25 34515.0 26 34515.0 27 40492.0 28 46469.0 29 52378.0 30 58287.0 31 65035.5 32 71784.0 33 71784.0 34 80002.5 35 88221.0 36 98591.0 37 108961.0 38 120169.0 39 131377.0 40 131377.0 41 144100.5 42 156824.0 43 167111.0 44 177398.0 45 186832.5 46 196267.0 47 196267.0 48 203940.5 49 211614.0 50 212376.5 51 213139.0 52 204772.0 53 196405.0 54 196405.0 55 182689.0 56 168973.0 57 155513.0 58 142053.0 59 128044.0 60 114035.0 61 114035.0 62 98362.0 63 82689.0 64 68671.5 65 54654.0 66 45301.0 67 35948.0 68 35948.0 69 29068.0 70 22188.0 71 18494.0 72 14800.0 73 11884.5 74 8969.0 75 8969.0 76 7077.0 77 5185.0 78 4215.0 79 3245.0 80 2561.5 81 1878.0 82 1878.0 83 1550.5 84 1223.0 85 951.5 86 680.0 87 493.5 88 307.0 89 307.0 90 202.5 91 98.0 92 66.5 93 35.0 94 27.0 95 19.0 96 19.0 97 13.0 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2564242.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.61649975669119 #Duplication Level Percentage of deduplicated Percentage of total 1 84.660402394248 53.85798468315055 2 8.714824957060257 11.088133195208604 3 2.500175337735786 4.771572112942619 4 1.2232265351376574 3.11269562299852 5 0.7122490932134091 2.265539713255718 6 0.4381960555872348 1.672589955818902 7 0.30547474324336854 1.360326375045194 8 0.2269999557470068 1.1552754103638696 9 0.18184715472030463 1.041163152661732 >10 0.9600394587701251 10.896256741032884 >50 0.052156713756670414 2.259618348115238 >100 0.022204569915684057 2.6335609192503355 >500 0.001468687243053927 0.6310213788524222 >1k 4.895624143465472E-4 0.7580899074773861 >5k 6.11953017933184E-5 0.32160328278491696 >10k+ 1.8358590537995522E-4 2.174569201041023 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32939 1.2845511461086745 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11552 0.4505035016195819 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11367 0.44328889394994697 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8261 0.3221614808586709 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4344 0.1694067876588871 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4002 0.15606951293988633 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3080 0.12011346822959769 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2989 0.11656466121372319 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.899787929532392E-5 0.0 4 0.0 0.0 0.0 7.799575859064785E-5 0.0 5 0.0 0.0 0.0 7.799575859064785E-5 0.0 6 0.0 0.0 0.0 7.799575859064785E-5 7.799575859064785E-5 7 0.0 0.0 0.0 7.799575859064785E-5 7.799575859064785E-5 8 0.0 0.0 0.0 7.799575859064785E-5 7.799575859064785E-5 9 0.0 0.0 0.0 1.559915171812957E-4 7.799575859064785E-5 10 3.899787929532392E-5 0.0 0.0 3.509809136579153E-4 7.799575859064785E-5 11 3.899787929532392E-5 0.0 0.0 7.019618273158306E-4 7.799575859064785E-5 12 3.899787929532392E-5 0.0 0.0 0.0011699363788597176 7.799575859064785E-5 13 3.899787929532392E-5 0.0 0.0 0.0012869300167456894 1.1699363788597176E-4 14 7.799575859064785E-5 0.0 0.0 0.0014039236546316612 2.339872757719435E-4 15 1.1699363788597176E-4 0.0 0.0 0.0017549045682895765 2.339872757719435E-4 16 1.1699363788597176E-4 0.0 0.0 0.002495864274900731 2.339872757719435E-4 17 1.1699363788597176E-4 0.0 0.0 0.003119830343625914 2.339872757719435E-4 18 1.1699363788597176E-4 0.0 0.0 0.003392815498693181 2.7298515506726746E-4 19 1.1699363788597176E-4 0.0 0.0 0.003899787929532392 2.7298515506726746E-4 20 1.1699363788597176E-4 0.0 0.0 0.00686362675597701 2.7298515506726746E-4 21 1.1699363788597176E-4 0.0 0.0 0.0099444592203076 2.7298515506726746E-4 22 1.1699363788597176E-4 0.0 0.0 0.0171200690106472 2.7298515506726746E-4 23 1.1699363788597176E-4 0.0 0.0 0.02199480392256269 3.509809136579153E-4 24 1.1699363788597176E-4 0.0 0.0 0.03073032888471525 3.509809136579153E-4 25 1.1699363788597176E-4 0.0 0.0 0.03646301714112787 3.509809136579153E-4 26 1.1699363788597176E-4 0.0 0.0 0.04215670751824516 3.509809136579153E-4 27 1.1699363788597176E-4 0.0 0.0 0.06251360051040425 3.509809136579153E-4 28 1.1699363788597176E-4 0.0 0.0 0.2075467136097139 3.8997879295323923E-4 29 1.1699363788597176E-4 0.0 0.0 0.4458627539834384 3.8997879295323923E-4 30 1.1699363788597176E-4 0.0 0.0 0.7424806239036721 3.8997879295323923E-4 31 1.1699363788597176E-4 3.899787929532392E-5 0.0 1.2418484682802948 3.8997879295323923E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGG 50 0.0070371884 18.499998 12 AACGCAG 12320 0.0 17.34375 5 ACGCAGA 13745 0.0 15.572573 6 CGCAGAG 13785 0.0 15.540806 7 AGACGTA 290 0.0 15.310345 25 CGAGACG 295 0.0 15.050847 23 CTATACT 395 0.0 14.987342 4 TAATACG 100 1.0941981E-4 14.799999 4 AGAGTAC 14530 0.0 14.629387 10 TAAGACT 410 0.0 14.439024 4 CAGAGTA 14835 0.0 14.390968 9 TACACCG 155 1.2118835E-7 14.322581 5 GCAGAGT 15025 0.0 14.196672 8 TATACTG 450 0.0 13.9777775 5 ACTAGAC 190 7.1377144E-9 13.631579 3 GACCGAT 245 7.2759576E-12 13.591836 19 GACGTAG 330 0.0 13.454546 26 TAATACT 415 0.0 13.373494 4 TATACAC 1790 0.0 13.125699 37 CGTATAC 85 0.009408861 13.058823 3 >>END_MODULE