##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727409.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4394647 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29727757428526 33.0 31.0 34.0 30.0 34.0 2 32.44509741055425 34.0 31.0 34.0 31.0 34.0 3 32.53959692325686 34.0 31.0 34.0 31.0 34.0 4 36.08007855921078 37.0 35.0 37.0 35.0 37.0 5 35.890002541728606 37.0 35.0 37.0 35.0 37.0 6 35.90413905826794 37.0 35.0 37.0 35.0 37.0 7 35.8780600580661 37.0 35.0 37.0 35.0 37.0 8 35.83027191945109 37.0 35.0 37.0 35.0 37.0 9 37.66637161073461 39.0 37.0 39.0 35.0 39.0 10 37.49244842646065 39.0 37.0 39.0 35.0 39.0 11 37.59987707772661 39.0 37.0 39.0 35.0 39.0 12 37.525777383257406 39.0 37.0 39.0 35.0 39.0 13 37.60525066063327 39.0 37.0 39.0 35.0 39.0 14 38.82461640263712 40.0 38.0 41.0 35.0 41.0 15 38.749552580673715 40.0 38.0 41.0 35.0 41.0 16 38.72224936382831 40.0 38.0 41.0 35.0 41.0 17 38.66771324295217 40.0 38.0 41.0 35.0 41.0 18 38.63885950339129 40.0 38.0 41.0 34.0 41.0 19 38.69514434265141 40.0 38.0 41.0 34.0 41.0 20 38.657987092023546 40.0 38.0 41.0 34.0 41.0 21 38.61817160741238 40.0 38.0 41.0 34.0 41.0 22 38.57107999800667 40.0 38.0 41.0 34.0 41.0 23 38.51071906344241 40.0 38.0 41.0 34.0 41.0 24 38.46982408370911 40.0 38.0 41.0 34.0 41.0 25 38.36406246053437 40.0 38.0 41.0 34.0 41.0 26 38.25775085006828 40.0 38.0 41.0 34.0 41.0 27 38.17259383973275 40.0 38.0 41.0 34.0 41.0 28 38.085978691803916 40.0 38.0 41.0 33.0 41.0 29 38.0079339705783 40.0 37.0 41.0 33.0 41.0 30 37.942120265859806 40.0 37.0 41.0 33.0 41.0 31 37.85035840193763 40.0 37.0 41.0 33.0 41.0 32 37.75698184632349 40.0 37.0 41.0 33.0 41.0 33 37.662828664054246 40.0 37.0 41.0 33.0 41.0 34 37.56669580059559 40.0 37.0 41.0 33.0 41.0 35 37.50216638560503 40.0 37.0 41.0 33.0 41.0 36 37.42272860596084 40.0 37.0 41.0 32.0 41.0 37 37.34402217060892 40.0 37.0 41.0 32.0 41.0 38 37.25520912146072 40.0 36.0 41.0 32.0 41.0 39 37.1549075500262 39.0 36.0 41.0 31.0 41.0 40 37.039926756346986 39.0 36.0 41.0 31.0 41.0 41 36.93570700900436 39.0 36.0 41.0 31.0 41.0 42 36.82403728900182 39.0 36.0 41.0 31.0 41.0 43 35.178767714448966 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 9.0 11 22.0 12 11.0 13 5.0 14 8.0 15 13.0 16 18.0 17 47.0 18 103.0 19 211.0 20 444.0 21 941.0 22 1766.0 23 3283.0 24 5671.0 25 9264.0 26 14187.0 27 21457.0 28 31375.0 29 43857.0 30 59818.0 31 78713.0 32 101717.0 33 134381.0 34 182635.0 35 251735.0 36 372637.0 37 623173.0 38 1196190.0 39 1260948.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.41436297386343 18.192632991910386 12.756291916051504 25.63671211817468 2 16.755657507872645 21.346902265415174 36.877614971122824 25.019825255589357 3 18.099678995832885 22.713633199663136 31.39954130559292 27.787146498911063 4 13.01692718436771 15.672953936914617 36.253696827071664 35.05642205164602 5 14.016302105720893 37.43948034961625 35.017647606281 13.526569938381854 6 33.909503994291235 37.10889634594087 15.262591056801606 13.71900860296629 7 29.07905913717302 31.365954990241534 21.496061003306977 18.058924869278464 8 27.15351198856245 36.085378416059356 19.626104212693306 17.13500538268489 9 26.492343981211686 13.732911881204565 19.184430512848927 40.59031362473482 10 14.745302637504217 27.989324284749152 35.09333059060261 22.17204248714402 11 36.099509243859636 21.46709394406422 22.600336272742723 19.83306053933342 12 20.736477810390685 25.921080805807613 31.728987561458293 21.61345382234341 13 31.229334233216 19.569922225835203 25.067565153697213 24.13317838725158 14 21.330382167213884 20.08382015665877 27.935167488992857 30.650630187134485 15 24.48804192919249 28.593627656555803 22.955131549815036 23.963198864436666 16 23.54614602720082 26.734183655706588 25.42943722214776 24.290233094944828 17 23.395098627944407 27.011475551961283 26.644256068803706 22.949169751290604 18 23.289288081613833 26.18531135720343 27.24175570870652 23.283644852476208 19 24.442395487055045 26.05610871589914 27.240822755502318 22.260673041543498 20 23.808169347845233 26.147856699298032 27.073255258044615 22.97071869481212 21 23.486163962657297 26.304023963699475 27.204414825582123 23.005397248061108 22 23.81501858966147 25.89828033969509 26.969492657772058 23.317208412871388 23 23.226370627720495 25.96950335260147 27.100538450528568 23.703587569149466 24 23.162406445841953 26.10341626983919 27.221230738214015 23.51294654610484 25 23.58553485638323 25.654119659667774 27.11633039013145 23.644015093817547 26 23.166684377607577 26.055721881643734 27.461181751344306 23.316411989404383 27 23.537908733056376 26.434614657331977 26.908395600374728 23.11908100923692 28 23.234607921864942 26.30375090422507 27.236544823736697 23.225096350173292 29 23.149618160457482 26.697957765435998 27.156288093218862 22.996135980887658 30 23.26928647511393 26.631900127587038 26.903412264966903 23.19540113233213 31 23.29545467474407 25.779340183637046 27.22209542654962 23.703109715069264 32 22.696430452775843 26.367396516716813 27.35751017089655 23.578662859610795 33 23.148457657691278 25.79667946026154 27.328520356697588 23.72634252534959 34 23.179518172904444 25.709459713146472 27.9614722183602 23.149549895588883 35 23.01716156041657 25.781547414388463 27.623629383656983 23.57766164153799 36 22.806291381310036 25.555727229058444 27.9243133748854 23.713668014746123 37 22.676269561582536 25.00660462603709 27.958809888484787 24.358315923895592 38 22.266111476075327 25.04146521893567 28.58684667960817 24.105576625380834 39 22.246155379487817 24.814712080401453 29.021033998862706 23.91809854124802 40 22.25145728428245 24.84342883512601 29.280258459894505 23.624855420697045 41 21.839433292366827 24.603705371557716 29.668093933369395 23.888767402706065 42 21.348540622261584 25.002372204183864 29.45615427132145 24.192932902233103 43 21.046559598529758 24.32033790199759 29.53060848800825 25.102494011464405 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 866.0 1 1041.5 2 1217.0 3 4049.5 4 6882.0 5 6882.0 6 8706.0 7 10530.0 8 9462.5 9 8395.0 10 11090.0 11 13785.0 12 13785.0 13 20613.0 14 27441.0 15 43623.0 16 59805.0 17 48566.5 18 37328.0 19 37328.0 20 40532.5 21 43737.0 22 38571.5 23 33406.0 24 40153.5 25 46901.0 26 46901.0 27 56941.0 28 66981.0 29 77349.5 30 87718.0 31 100828.5 32 113939.0 33 113939.0 34 130511.0 35 147083.0 36 166466.5 37 185850.0 38 207581.0 39 229312.0 40 229312.0 41 250461.5 42 271611.0 43 291762.0 44 311913.0 45 329219.5 46 346526.0 47 346526.0 48 360495.5 49 374465.0 50 378323.5 51 382182.0 52 370854.5 53 359527.0 54 359527.0 55 338006.0 56 316485.0 57 290568.0 58 264651.0 59 237795.5 60 210940.0 61 210940.0 62 182727.5 63 154515.0 64 130025.0 65 105535.0 66 87237.5 67 68940.0 68 68940.0 69 55567.0 70 42194.0 71 34197.5 72 26201.0 73 21036.0 74 15871.0 75 15871.0 76 12737.0 77 9603.0 78 7653.5 79 5704.0 80 4417.0 81 3130.0 82 3130.0 83 2500.5 84 1871.0 85 1393.0 86 915.0 87 683.0 88 451.0 89 451.0 90 296.0 91 141.0 92 101.0 93 61.0 94 45.5 95 30.0 96 30.0 97 18.5 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4394647.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.94196753163057 #Duplication Level Percentage of deduplicated Percentage of total 1 84.42836333967753 50.6080221405566 2 8.118343505038228 9.73258965579251 3 2.650571785798284 4.766414637737304 4 1.3175421882793084 3.1590428428556723 5 0.778099974156393 2.3320421693622544 6 0.4953317648557049 1.781469633981956 7 0.34862055643561923 1.4627901452306011 8 0.2680025497829922 1.285168010998906 9 0.20532532488200156 1.1076843561748593 >10 1.2632202672454855 14.225796765770735 >50 0.08986098265395497 3.6570691031379243 >100 0.03569455984946048 3.5726209785201934 >500 5.305489059600444E-4 0.21754937946196215 >1k 3.4106707316470636E-4 0.4901845221512636 >5k 3.789634146273617E-5 0.20021717309610249 >10k+ 1.1368902438820852E-4 1.4013384851711552 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34471 0.7843860951744247 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13904 0.31638491100650407 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13315 0.30298224180463185 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8814 0.20056218394788025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.2754956200122557E-5 0.0 2 0.0 0.0 0.0 2.2754956200122557E-5 0.0 3 0.0 0.0 0.0 2.2754956200122557E-5 0.0 4 0.0 0.0 0.0 2.2754956200122557E-5 0.0 5 0.0 0.0 0.0 2.2754956200122557E-5 0.0 6 4.550991240024511E-5 0.0 0.0 2.2754956200122557E-5 0.0 7 4.550991240024511E-5 0.0 0.0 2.2754956200122557E-5 0.0 8 4.550991240024511E-5 0.0 0.0 4.550991240024511E-5 2.2754956200122557E-5 9 4.550991240024511E-5 0.0 0.0 4.550991240024511E-5 6.826486860036768E-5 10 4.550991240024511E-5 0.0 0.0 6.826486860036768E-5 6.826486860036768E-5 11 4.550991240024511E-5 0.0 0.0 1.592846934008579E-4 6.826486860036768E-5 12 4.550991240024511E-5 0.0 0.0 2.730594744014707E-4 6.826486860036768E-5 13 4.550991240024511E-5 0.0 0.0 3.185693868017158E-4 6.826486860036768E-5 14 4.550991240024511E-5 0.0 0.0 3.4132434300183836E-4 2.0479460580110303E-4 15 4.550991240024511E-5 0.0 0.0 4.7785408020257374E-4 2.730594744014707E-4 16 4.550991240024511E-5 0.0 0.0 7.73668510804167E-4 3.185693868017158E-4 17 4.550991240024511E-5 0.0 0.0 0.0010012180728053925 3.185693868017158E-4 18 4.550991240024511E-5 0.0 0.0 0.001183257722406373 3.4132434300183836E-4 19 4.550991240024511E-5 0.0 0.0 0.0017293766712093144 3.4132434300183836E-4 20 4.550991240024511E-5 0.0 0.0 0.0025485550944137265 3.4132434300183836E-4 21 9.101982480049023E-5 0.0 0.0 0.0036180380358194868 3.4132434300183836E-4 22 9.101982480049023E-5 0.0 0.0 0.006780976947636522 3.4132434300183836E-4 23 9.101982480049023E-5 0.0 0.0 0.008942697786648166 5.233639926028188E-4 24 9.101982480049023E-5 0.0 0.0 0.012515225910067406 5.461189488029414E-4 25 9.101982480049023E-5 0.0 0.0 0.014608681880478683 5.461189488029414E-4 26 9.101982480049023E-5 0.0 0.0 0.017384786536893633 5.688739050030639E-4 27 9.101982480049023E-5 0.0 0.0 0.03406416943158347 5.688739050030639E-4 28 9.101982480049023E-5 0.0 0.0 0.14770242069499553 5.688739050030639E-4 29 9.101982480049023E-5 2.2754956200122557E-5 0.0 0.3325636848647912 5.688739050030639E-4 30 9.101982480049023E-5 2.2754956200122557E-5 0.0 0.5722871484330824 5.688739050030639E-4 31 9.101982480049023E-5 2.2754956200122557E-5 0.0 1.2395762390016765 5.688739050030639E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 5910 0.0 17.967852 37 AACGCAG 14230 0.0 17.19993 5 ACGCAGA 15985 0.0 15.380982 6 CGCAGAG 16360 0.0 15.0962715 7 AGAGTAC 16755 0.0 14.652044 10 CAGAGTA 17090 0.0 14.483909 9 GCAGAGT 17405 0.0 14.285551 8 GGACCGT 280 0.0 13.875001 6 CGATAAA 175 3.5735866E-8 13.742857 25 GGTATCA 9185 0.0 13.595535 1 TCGTTAC 245 7.2759576E-12 13.591836 23 TAAGACT 735 0.0 13.591836 4 TATACAC 2345 0.0 13.411514 37 CAACGCA 18740 0.0 13.129669 4 TCCGTAT 170 3.738296E-7 13.058824 8 ATCAACG 18800 0.0 13.048405 2 TCAACGC 18915 0.0 13.0473175 3 GTCCTAC 545 0.0 12.899082 1 TATCAAC 19265 0.0 12.704646 1 TGGACCG 425 0.0 12.6235285 5 >>END_MODULE