##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727407.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2257195 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39463847828832 33.0 31.0 34.0 31.0 34.0 2 32.53578844539351 34.0 31.0 34.0 31.0 34.0 3 32.62596452676885 34.0 31.0 34.0 31.0 34.0 4 36.146841987511046 37.0 35.0 37.0 35.0 37.0 5 35.95895170776118 37.0 35.0 37.0 35.0 37.0 6 35.97475362119799 37.0 35.0 37.0 35.0 37.0 7 35.94050757688193 37.0 35.0 37.0 35.0 37.0 8 35.89601828818512 37.0 35.0 37.0 35.0 37.0 9 37.739791644053795 39.0 37.0 39.0 35.0 39.0 10 37.574596346350226 39.0 37.0 39.0 35.0 39.0 11 37.680993888432326 39.0 37.0 39.0 35.0 39.0 12 37.60888625041257 39.0 37.0 39.0 35.0 39.0 13 37.68843409630094 39.0 37.0 39.0 35.0 39.0 14 38.93681804186169 40.0 38.0 41.0 36.0 41.0 15 38.86586803532703 40.0 38.0 41.0 36.0 41.0 16 38.83718686245539 40.0 38.0 41.0 35.0 41.0 17 38.77719824826831 40.0 38.0 41.0 35.0 41.0 18 38.73910849527843 40.0 38.0 41.0 35.0 41.0 19 38.78755047747315 40.0 38.0 41.0 35.0 41.0 20 38.75271742140134 40.0 38.0 41.0 35.0 41.0 21 38.71459709949738 40.0 38.0 41.0 35.0 41.0 22 38.67677803645675 40.0 38.0 41.0 35.0 41.0 23 38.61470453372438 40.0 38.0 41.0 34.0 41.0 24 38.57348611883333 40.0 38.0 41.0 34.0 41.0 25 38.46994521961992 40.0 38.0 41.0 34.0 41.0 26 38.36858756111014 40.0 38.0 41.0 34.0 41.0 27 38.2859518118727 40.0 38.0 41.0 34.0 41.0 28 38.203767507902505 40.0 38.0 41.0 34.0 41.0 29 38.123392972250954 40.0 38.0 41.0 34.0 41.0 30 38.06352796280339 40.0 37.0 41.0 33.0 41.0 31 37.97453343641112 40.0 37.0 41.0 33.0 41.0 32 37.88093452271514 40.0 37.0 41.0 33.0 41.0 33 37.788583175135514 40.0 37.0 41.0 33.0 41.0 34 37.70213029888866 40.0 37.0 41.0 33.0 41.0 35 37.63035847589597 40.0 37.0 41.0 33.0 41.0 36 37.54710248782227 40.0 37.0 41.0 33.0 41.0 37 37.468853599268115 40.0 37.0 41.0 32.0 41.0 38 37.378150314881964 40.0 37.0 41.0 32.0 41.0 39 37.27297109908537 40.0 36.0 41.0 32.0 41.0 40 37.153234434774134 39.0 36.0 41.0 31.0 41.0 41 37.0478828811866 39.0 36.0 41.0 31.0 41.0 42 36.93856800143541 39.0 36.0 41.0 31.0 41.0 43 35.292804564957834 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 5.0 12 1.0 13 1.0 14 2.0 15 4.0 16 14.0 17 15.0 18 47.0 19 82.0 20 216.0 21 410.0 22 787.0 23 1410.0 24 2553.0 25 4108.0 26 6514.0 27 9851.0 28 14602.0 29 20815.0 30 28304.0 31 37185.0 32 48958.0 33 65136.0 34 89320.0 35 124809.0 36 187534.0 37 314952.0 38 618374.0 39 681181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.13021471339428 17.894776481429382 12.291937559670298 25.68307124550604 2 16.79615629132618 20.96832573171569 36.77670737353219 25.458810603425935 3 18.171801727365157 22.652539988791396 31.079060515374167 28.096597768469273 4 13.150126595176756 15.128068243993098 35.886930460150765 35.83487470067938 5 14.128154634402435 37.439875597810556 34.95852152782547 13.473448239961543 6 34.90686449332025 36.46680946927492 14.950812845146299 13.675513192258535 7 29.604309773856492 31.229911460906123 21.306090080830412 17.859688684406976 8 27.619811314485453 36.07127430284047 19.300281987156627 17.008632395517445 9 26.77358402796391 13.49839070173379 18.72058018912854 41.00744508117376 10 14.721413081280085 27.668544365905472 34.959008858339665 22.65103369447478 11 36.64760909004317 21.208978400182527 22.248587295293497 19.894825214480804 12 20.865720507089552 25.171019783403736 31.854137546822493 22.109122162684216 13 31.389711566789753 19.205739867401796 25.051269385232555 24.353279180575893 14 21.457472659650584 19.50190391171343 27.55769882531195 31.482924603324037 15 24.78558564944544 28.37357871163103 22.676419183987207 24.164416454936326 16 24.01068582909319 26.476844047590042 24.945474360877107 24.566995762439664 17 23.725686083834137 26.77163470590711 26.29963295151726 23.20304625874149 18 23.589809475920333 26.008519423443698 26.86320853980272 23.538462560833246 19 24.610412480977498 25.975425251252105 26.83919643628486 22.57496583148554 20 23.90883375162536 25.889787989074936 26.7886469711301 23.41273128816961 21 23.593973936678044 26.14085180943605 26.9215995959587 23.343574657927206 22 24.036071318605615 25.570409291177764 26.532001001242694 23.861518388973927 23 23.40488969716839 25.73277895795445 26.741553122348755 24.1207782225284 24 23.43253462815574 25.746645726222145 26.859664317881265 23.961155327740848 25 23.865284124765473 25.53922013826896 26.70238947011667 23.8931062668489 26 23.456591034447623 25.894882808087026 26.986458857121338 23.66206730034401 27 23.843664371044593 26.32227166904056 26.466122776277633 23.367941183637214 28 23.625428906230965 26.293341957606675 26.56279142918534 23.51843770697702 29 23.50479245257942 26.513039413962908 26.741818938992868 23.240349194464812 30 23.72417978951752 26.429838804356738 26.489691852055312 23.35628955407043 31 23.586176648450845 25.721526053353834 26.843892530330788 23.84840476786454 32 23.119801346361303 26.328429754629084 26.776906736015277 23.77486216299434 33 23.392839342635437 25.867237877099676 26.747179574649067 23.992743205615817 34 23.58174637104902 25.82231486424523 27.273629438307278 23.32230932639847 35 23.41463630745239 25.88296536187613 26.984066507324357 23.718331823347118 36 23.21757756861946 25.694678572298805 27.220820531677592 23.866923327404148 37 23.106200394737716 25.245980077042525 27.27482561320577 24.37299391501399 38 22.87223744514763 25.319699893008803 27.703011924091626 24.10505073775194 39 22.733835579114785 25.188297865270837 28.069218654126026 24.008647901488352 40 23.02481619886629 25.02464341804762 28.240360270158316 23.71018011292777 41 22.541384328779746 24.938518825356248 28.489519071236646 24.03057777462736 42 22.140532829463115 25.157551740102207 28.389128985311412 24.312786445123262 43 21.82841978650493 24.61023526988142 28.46027924038464 25.101065703229008 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 376.0 1 451.0 2 526.0 3 1915.5 4 3305.0 5 3305.0 6 4232.5 7 5160.0 8 4588.0 9 4016.0 10 5269.5 11 6523.0 12 6523.0 13 10097.0 14 13671.0 15 21276.0 16 28881.0 17 23719.0 18 18557.0 19 18557.0 20 20208.5 21 21860.0 22 19083.5 23 16307.0 24 19323.5 25 22340.0 26 22340.0 27 26951.0 28 31562.0 29 36604.0 30 41646.0 31 47428.5 32 53211.0 33 53211.0 34 61096.0 35 68981.0 36 78583.5 37 88186.0 38 99108.0 39 110030.0 40 110030.0 41 121184.0 42 132338.0 43 143532.0 44 154726.0 45 164992.5 46 175259.0 47 175259.0 48 184557.0 49 193855.0 50 196534.5 51 199214.0 52 195633.0 53 192052.0 54 192052.0 55 181807.0 56 171562.0 57 158028.5 58 144495.0 59 130882.5 60 117270.0 61 117270.0 62 101672.0 63 86074.0 64 72964.5 65 59855.0 66 48988.0 67 38121.0 68 38121.0 69 30746.5 70 23372.0 71 18829.0 72 14286.0 73 11465.0 74 8644.0 75 8644.0 76 6833.0 77 5022.0 78 3934.0 79 2846.0 80 2187.0 81 1528.0 82 1528.0 83 1171.5 84 815.0 85 625.5 86 436.0 87 306.0 88 176.0 89 176.0 90 122.5 91 69.0 92 45.5 93 22.0 94 18.5 95 15.0 96 15.0 97 9.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2257195.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.04027910964105 #Duplication Level Percentage of deduplicated Percentage of total 1 82.92278107087854 49.787069200432065 2 8.845466943214268 10.621686082513762 3 2.9563361997010635 5.324977517159621 4 1.4092357102485675 3.3844362149838894 5 0.8513359709879053 2.5557224657095556 6 0.5809029814520288 2.092654628520147 7 0.4136268205511671 1.738398882718784 8 0.31255706306004616 1.501281064305188 9 0.24093221431582906 1.3019073654623607 >10 1.374292565860614 14.91103589160672 >50 0.07039408684798365 2.852671860423062 >100 0.021180430825806094 2.0002523920461837 >500 3.684392523291956E-4 0.1489641307986115 >1k 3.6843925232898954E-4 0.5075929529705219 >5k 1.4737570093159582E-4 0.5621880635750389 >10k+ 7.368785046579791E-5 0.7091612867745573 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16029 0.7101291647376501 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6633 0.29386030006268843 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6074 0.26909504938651735 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4337 0.19214113091691237 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.430277401819515E-5 2 0.0 0.0 0.0 0.0 4.430277401819515E-5 3 0.0 0.0 0.0 0.0 4.430277401819515E-5 4 0.0 0.0 0.0 0.0 4.430277401819515E-5 5 0.0 0.0 0.0 0.0 4.430277401819515E-5 6 0.0 0.0 0.0 0.0 4.430277401819515E-5 7 0.0 0.0 0.0 0.0 4.430277401819515E-5 8 0.0 0.0 0.0 0.0 4.430277401819515E-5 9 0.0 0.0 0.0 0.0 8.86055480363903E-5 10 0.0 0.0 0.0 0.0 8.86055480363903E-5 11 0.0 0.0 0.0 8.86055480363903E-5 8.86055480363903E-5 12 0.0 0.0 0.0 1.772110960727806E-4 8.86055480363903E-5 13 0.0 0.0 0.0 2.2151387009097575E-4 8.86055480363903E-5 14 0.0 0.0 0.0 2.658166441091709E-4 8.86055480363903E-5 15 0.0 0.0 0.0 3.544221921455612E-4 1.3290832205458544E-4 16 0.0 0.0 0.0 6.645416102729273E-4 1.3290832205458544E-4 17 0.0 0.0 0.0 9.746610284002933E-4 1.3290832205458544E-4 18 4.430277401819515E-5 0.0 0.0 0.0010632665764366835 1.772110960727806E-4 19 4.430277401819515E-5 0.0 0.0 0.0015505970906368302 1.772110960727806E-4 20 4.430277401819515E-5 0.0 0.0 0.0024809553450189283 1.772110960727806E-4 21 4.430277401819515E-5 0.0 0.0 0.003987249661637563 1.772110960727806E-4 22 4.430277401819515E-5 0.0 0.0 0.007664379905147761 1.772110960727806E-4 23 4.430277401819515E-5 0.0 0.0 0.009436490865875566 3.544221921455612E-4 24 4.430277401819515E-5 0.0 0.0 0.013822465493676887 3.544221921455612E-4 25 4.430277401819515E-5 0.0 0.0 0.017676806833259864 3.544221921455612E-4 26 4.430277401819515E-5 0.0 0.0 0.02091090933658811 3.544221921455612E-4 27 4.430277401819515E-5 0.0 0.0 0.03273974999944622 3.544221921455612E-4 28 4.430277401819515E-5 0.0 0.0 0.10832028247448713 3.544221921455612E-4 29 4.430277401819515E-5 0.0 0.0 0.2409184851109452 3.544221921455612E-4 30 4.430277401819515E-5 0.0 0.0 0.4063893460689041 3.544221921455612E-4 31 4.430277401819515E-5 0.0 0.0 0.8666951681179517 3.544221921455612E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 95 1.6779086E-7 19.473684 5 CTCGACG 70 1.2198583E-4 18.5 31 AATACCG 50 0.0070369327 18.499998 5 CTTATAC 2385 0.0 18.150944 37 ATACCGT 90 4.4490123E-5 16.444445 6 TACCGTC 125 1.6596823E-7 16.279999 7 GTCTTAG 340 0.0 15.779412 1 GTCTTAT 305 0.0 15.770493 1 TAAGACT 355 0.0 15.633802 4 AACGCAG 6530 0.0 15.496937 5 TCGACGA 85 5.366995E-4 15.235294 32 TCGTTAC 185 3.0559022E-10 15.0 23 TACGCTT 75 0.004106035 14.8 5 ATATACT 295 0.0 14.42373 4 TAATACG 90 8.278372E-4 14.388888 4 CGACCGA 90 8.278372E-4 14.388888 18 TAGATCG 90 8.278372E-4 14.388888 5 GTATAGA 335 0.0 14.35821 1 ACGCAGA 7215 0.0 14.102564 6 TATACTC 210 1.364242E-10 14.095239 5 >>END_MODULE