##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727406.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2835418 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32489142694305 33.0 31.0 34.0 30.0 34.0 2 32.466081896919604 34.0 31.0 34.0 31.0 34.0 3 32.56086862677743 34.0 31.0 34.0 31.0 34.0 4 36.09325644402342 37.0 35.0 37.0 35.0 37.0 5 35.90647551789542 37.0 35.0 37.0 35.0 37.0 6 35.92610542784168 37.0 35.0 37.0 35.0 37.0 7 35.894861709984205 37.0 35.0 37.0 35.0 37.0 8 35.84868756564288 37.0 35.0 37.0 35.0 37.0 9 37.68183280207715 39.0 37.0 39.0 35.0 39.0 10 37.52448810016724 39.0 37.0 39.0 35.0 39.0 11 37.62659685450258 39.0 37.0 39.0 35.0 39.0 12 37.55600514633116 39.0 37.0 39.0 35.0 39.0 13 37.63603285300439 39.0 37.0 39.0 35.0 39.0 14 38.85590872315828 40.0 38.0 41.0 36.0 41.0 15 38.785975119012434 40.0 38.0 41.0 35.0 41.0 16 38.760540068519 40.0 38.0 41.0 35.0 41.0 17 38.69798632864713 40.0 38.0 41.0 35.0 41.0 18 38.67549581754789 40.0 38.0 41.0 35.0 41.0 19 38.72905370566174 40.0 38.0 41.0 35.0 41.0 20 38.6916535762981 40.0 38.0 41.0 34.0 41.0 21 38.64768192908418 40.0 38.0 41.0 34.0 41.0 22 38.60538375646907 40.0 38.0 41.0 34.0 41.0 23 38.533377794737845 40.0 38.0 41.0 34.0 41.0 24 38.49661919336056 40.0 38.0 41.0 34.0 41.0 25 38.38658991372701 40.0 38.0 41.0 34.0 41.0 26 38.28008392413394 40.0 38.0 41.0 34.0 41.0 27 38.19351714632552 40.0 38.0 41.0 34.0 41.0 28 38.103873220809064 40.0 38.0 41.0 33.0 41.0 29 38.01679505455633 40.0 37.0 41.0 33.0 41.0 30 37.938764936951095 40.0 37.0 41.0 33.0 41.0 31 37.83766344151021 40.0 37.0 41.0 33.0 41.0 32 37.73953963754198 40.0 37.0 41.0 33.0 41.0 33 37.630355735909134 40.0 37.0 41.0 33.0 41.0 34 37.526486747280295 40.0 37.0 41.0 33.0 41.0 35 37.45332786911842 40.0 37.0 41.0 33.0 41.0 36 37.35500797413292 40.0 36.0 41.0 32.0 41.0 37 37.271291569708595 40.0 36.0 41.0 32.0 41.0 38 37.16697255924876 40.0 36.0 41.0 31.0 41.0 39 37.06210265999581 39.0 36.0 41.0 31.0 41.0 40 36.936838942265304 39.0 36.0 41.0 31.0 41.0 41 36.82376425627544 39.0 36.0 41.0 31.0 41.0 42 36.700861389749235 39.0 36.0 41.0 30.0 41.0 43 35.07482988398888 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 0.0 10 9.0 11 8.0 12 10.0 13 9.0 14 8.0 15 11.0 16 18.0 17 24.0 18 96.0 19 132.0 20 271.0 21 629.0 22 1176.0 23 2123.0 24 3752.0 25 5915.0 26 9629.0 27 14182.0 28 20895.0 29 29203.0 30 39520.0 31 50913.0 32 65492.0 33 86193.0 34 116832.0 35 161127.0 36 239288.0 37 401141.0 38 765061.0 39 821747.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.286774648393994 18.699465122955417 13.283755693164112 24.730004535486476 2 16.519680696109003 21.741873684938167 37.32426753304098 24.414178085911846 3 18.093452182359005 23.383395323017627 31.435435621837765 27.0877168727856 4 13.337892331924253 15.628489344428228 35.933855255203994 35.09976306844352 5 14.198611985957626 37.45927408233989 34.76429224897352 13.577821682728967 6 33.77777103763889 36.85354328709206 15.38570327196907 13.982982403299973 7 28.558611111307048 31.42654804335728 22.002858132381185 18.01198271295449 8 26.82881324728841 36.3629983304049 20.016731219171213 16.791457203135483 9 26.23359236627545 14.113509895190058 19.586424294407383 40.06647344412711 10 14.949259685873475 27.92244388658039 34.955727867989836 22.1725685595563 11 35.70937336223442 21.535519630615312 22.849047300962326 19.906059706187943 12 20.58578311910272 25.906268493745895 31.945766021094595 21.56218236605679 13 30.97289359099787 19.572175954303738 25.558206938095196 23.896723516603195 14 21.237856287855973 20.029286687183337 28.300800799035624 30.432056225925063 15 24.493214051684795 28.683354623551093 23.25533660292768 23.568094721836427 16 23.510395998050377 26.66834308027952 25.515532454121402 24.3057284675487 17 23.190337368246936 27.153668348017824 27.127675707779243 22.528318575955996 18 23.22507651429172 26.132866476829868 27.63698333014744 23.005073678730966 19 24.009123169846564 26.321445374191743 27.77643366868659 21.892997787275103 20 23.42733946106006 26.304869334962248 27.547296377465337 22.720494826512354 21 23.027821647460797 26.702094717604247 27.59776512669384 22.672318508241112 22 23.49741731201537 26.091990669453324 27.244730759274294 23.16586125925701 23 22.88681950950442 26.022265500183746 27.476618967644278 23.61429602266756 24 22.988779784850063 26.165630605434544 27.615222870137668 23.230366739577725 25 23.3263314262659 25.888740213964923 27.433309656636162 23.351618703133013 26 22.89672986487354 26.269001607523123 27.895463737621757 22.93880478998158 27 23.436297575877703 26.56430198298805 27.366970231549637 22.63243020958462 28 23.09634769899888 26.582747235151928 27.503175898580036 22.817729167269167 29 22.968676928763237 26.754855897790026 27.58083640577862 22.695630767668117 30 23.027292624932198 26.64009327725224 27.447205315054074 22.88540878276148 31 23.019956845868933 26.066280174563328 27.604254469711343 23.309508509856393 32 22.464165777321014 26.39681345043306 27.71965191728345 23.419368854962478 33 22.91655057561178 26.0521376389654 27.587784234987573 23.443527550435245 34 23.01660636985446 25.981248620132902 28.134370311537843 22.867774698474793 35 22.836668173793072 26.029953960932744 27.904562925113684 23.228814940160497 36 22.68833025677343 25.849839424028488 28.129468036106143 23.332362283091946 37 22.40664339437783 25.44541933499752 28.20444816249315 23.943489108131498 38 22.22307257695338 25.477372295725004 28.73971315693136 23.559841970390256 39 22.10157373621808 25.30159574355527 28.982181815873354 23.614648704353293 40 22.24666698172897 25.495641207046017 29.08036839718165 23.17732341404336 41 21.917826577950763 25.13283755693164 29.373623218869316 23.575712646248277 42 21.445726873427482 25.45342520926368 29.25455788176558 23.846290035543262 43 21.235422784224404 24.950183711890098 29.185326466856033 24.62906703702946 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 985.0 1 1055.5 2 1126.0 3 4041.0 4 6956.0 5 6956.0 6 8358.0 7 9760.0 8 8558.0 9 7356.0 10 9292.5 11 11229.0 12 11229.0 13 16379.0 14 21529.0 15 33623.0 16 45717.0 17 37177.5 18 28638.0 19 28638.0 20 30493.0 21 32348.0 22 27651.0 23 22954.0 24 26951.0 25 30948.0 26 30948.0 27 37355.5 28 43763.0 29 50285.0 30 56807.0 31 64742.5 32 72678.0 33 72678.0 34 83207.0 35 93736.0 36 106367.0 37 118998.0 38 132794.5 39 146591.0 40 146591.0 41 160411.5 42 174232.0 43 186634.0 44 199036.0 45 210646.5 46 222257.0 47 222257.0 48 230644.5 49 239032.0 50 240250.0 51 241468.0 52 236354.5 53 231241.0 54 231241.0 55 217325.5 56 203410.0 57 184730.5 58 166051.0 59 149295.0 60 132539.0 61 132539.0 62 115010.0 63 97481.0 64 81631.5 65 65782.0 66 54418.0 67 43054.0 68 43054.0 69 35041.5 70 27029.0 71 22051.5 72 17074.0 73 13574.0 74 10074.0 75 10074.0 76 8112.5 77 6151.0 78 4814.5 79 3478.0 80 2679.5 81 1881.0 82 1881.0 83 1479.0 84 1077.0 85 818.5 86 560.0 87 404.0 88 248.0 89 248.0 90 169.0 91 90.0 92 63.5 93 37.0 94 25.0 95 13.0 96 13.0 97 7.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2835418.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.15130466565478 #Duplication Level Percentage of deduplicated Percentage of total 1 82.8358805814151 48.99850409519081 2 9.016289198762754 10.666505386993363 3 2.919746450596117 5.181204355370252 4 1.4566290001124176 3.446460230819108 5 0.8544469162621912 2.5270824932227045 6 0.5568972950435859 1.9764720939961309 7 0.4003907581774594 1.6578545005587184 8 0.2906533580274527 1.3754020266221993 9 0.21852707192033913 1.163354526796809 >10 1.3446430426721732 14.421476992440407 >50 0.07721672291238417 3.098409612682781 >100 0.02707026981919721 2.643328667622726 >500 7.748646528068201E-4 0.2790953567567252 >1k 5.960497328573739E-4 0.7021102746189783 >5k 1.1920994657147478E-4 0.5790981852273134 >10k+ 1.1920994657147478E-4 1.2836412010810365 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 26094 0.9202875907538148 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10314 0.363755890665856 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9621 0.3393150498445026 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6804 0.2399646189732872 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4059 0.1431534962393552 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4044 0.14262447371075446 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.526816857338142E-5 0.0 0.0 0.0 6 0.0 3.526816857338142E-5 0.0 0.0 0.0 7 0.0 3.526816857338142E-5 0.0 0.0 0.0 8 0.0 3.526816857338142E-5 0.0 0.0 0.0 9 0.0 3.526816857338142E-5 0.0 3.526816857338142E-5 1.4107267429352567E-4 10 0.0 3.526816857338142E-5 0.0 1.4107267429352567E-4 1.4107267429352567E-4 11 0.0 3.526816857338142E-5 0.0 2.1160901144028852E-4 1.4107267429352567E-4 12 0.0 3.526816857338142E-5 0.0 4.2321802288057704E-4 1.4107267429352567E-4 13 0.0 3.526816857338142E-5 0.0 4.5848619145395845E-4 1.4107267429352567E-4 14 0.0 3.526816857338142E-5 0.0 6.70095202894247E-4 1.763408428669071E-4 15 0.0 3.526816857338142E-5 0.0 0.0010580450572014427 1.763408428669071E-4 16 0.0 3.526816857338142E-5 0.0 0.0014812630800820196 2.8214534858705134E-4 17 0.0 3.526816857338142E-5 0.0 0.002045553777256122 2.8214534858705134E-4 18 0.0 3.526816857338142E-5 0.0 0.002609844474430225 3.1741351716043276E-4 19 0.0 3.526816857338142E-5 0.0 0.003421012351617998 3.1741351716043276E-4 20 0.0 3.526816857338142E-5 0.0 0.0059955886574748415 3.1741351716043276E-4 21 0.0 3.526816857338142E-5 0.0 0.008182215109024489 3.1741351716043276E-4 22 0.0 3.526816857338142E-5 0.0 0.014001462923632423 3.1741351716043276E-4 23 0.0 3.526816857338142E-5 0.0 0.02013812425540079 4.937543600273399E-4 24 0.0 3.526816857338142E-5 0.0 0.02955472526449363 5.290225286007213E-4 25 0.0 3.526816857338142E-5 0.0 0.03523290040480804 5.642906971741027E-4 26 0.0 3.526816857338142E-5 0.0 0.042603947636644754 5.642906971741027E-4 27 0.0 3.526816857338142E-5 0.0 0.06729166563801176 5.642906971741027E-4 28 0.0 3.526816857338142E-5 0.0 0.19524458122223953 5.642906971741027E-4 29 0.0 3.526816857338142E-5 0.0 0.4078411013825827 5.642906971741027E-4 30 0.0 3.526816857338142E-5 0.0 0.6690018896684722 5.642906971741027E-4 31 0.0 3.526816857338142E-5 0.0 1.261048635509826 5.642906971741027E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 135 2.2231688E-8 16.444443 5 TAGATCG 105 9.352694E-6 15.857142 5 CTTATAC 3920 0.0 15.385203 37 TCTATAC 310 0.0 14.919355 3 GTATTAG 415 0.0 14.710843 1 AACGCAG 11275 0.0 14.537473 5 GCACCGT 350 0.0 14.271428 6 ACCGTGC 340 0.0 14.147059 8 GTACCGT 185 4.9076334E-9 14.0 6 TCGTATA 80 0.0063016266 13.875 2 TAATACC 310 0.0 13.725807 4 TCGTTAC 270 0.0 13.703703 23 ATTGCGA 190 7.1377144E-9 13.631579 10 ACGCGCA 110 2.4583534E-4 13.454545 19 TAAGACT 510 0.0 13.058824 4 ACGCAGA 12620 0.0 13.032092 6 TAGACTA 200 1.4650141E-8 12.949999 5 CGACGCG 115 3.5800505E-4 12.869565 17 CGCAGAG 12780 0.0 12.868935 7 CGATTCA 130 7.004869E-5 12.807693 14 >>END_MODULE