##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727401.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2541932 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30775606900578 33.0 31.0 34.0 30.0 34.0 2 32.4377796101548 34.0 31.0 34.0 31.0 34.0 3 32.530300967925186 34.0 31.0 34.0 31.0 34.0 4 36.067887732638006 37.0 35.0 37.0 35.0 37.0 5 35.87275702103754 37.0 35.0 37.0 35.0 37.0 6 35.89115562493411 37.0 35.0 37.0 35.0 37.0 7 35.85568142656845 37.0 35.0 37.0 35.0 37.0 8 35.80989459985555 37.0 35.0 37.0 35.0 37.0 9 37.64328117353257 39.0 37.0 39.0 35.0 39.0 10 37.4691840694401 39.0 37.0 39.0 35.0 39.0 11 37.58258285430137 39.0 37.0 39.0 35.0 39.0 12 37.505766479984516 39.0 37.0 39.0 35.0 39.0 13 37.58693938311489 39.0 37.0 39.0 35.0 39.0 14 38.80443300607569 40.0 38.0 41.0 35.0 41.0 15 38.730423158447984 40.0 38.0 41.0 35.0 41.0 16 38.70385714488035 40.0 38.0 41.0 35.0 41.0 17 38.636267610620585 40.0 38.0 41.0 34.0 41.0 18 38.61558649090534 40.0 38.0 41.0 34.0 41.0 19 38.66345362503797 40.0 38.0 41.0 34.0 41.0 20 38.62353752972149 40.0 38.0 41.0 34.0 41.0 21 38.575852540508556 40.0 38.0 41.0 34.0 41.0 22 38.53037256700809 40.0 38.0 41.0 34.0 41.0 23 38.45737533498142 40.0 38.0 41.0 34.0 41.0 24 38.41605991033592 40.0 38.0 41.0 34.0 41.0 25 38.30228031276997 40.0 38.0 41.0 34.0 41.0 26 38.185182373092594 40.0 38.0 41.0 34.0 41.0 27 38.092577220791114 40.0 38.0 41.0 33.0 41.0 28 37.98672663155427 40.0 37.0 41.0 33.0 41.0 29 37.89051359359731 40.0 37.0 41.0 33.0 41.0 30 37.81608162610172 40.0 37.0 41.0 33.0 41.0 31 37.70379577423786 40.0 37.0 41.0 33.0 41.0 32 37.5931425388248 40.0 37.0 41.0 33.0 41.0 33 37.47730348412153 40.0 36.0 41.0 32.0 41.0 34 37.36154822394934 39.0 36.0 41.0 32.0 41.0 35 37.2657604530727 39.0 36.0 41.0 32.0 41.0 36 37.15515481924772 39.0 36.0 41.0 31.0 41.0 37 37.05141876336582 39.0 36.0 41.0 31.0 41.0 38 36.936879900799866 39.0 36.0 41.0 31.0 41.0 39 36.812932840060235 39.0 36.0 41.0 31.0 41.0 40 36.67599015237229 39.0 35.0 41.0 30.0 41.0 41 36.55377169806273 39.0 35.0 40.0 30.0 41.0 42 36.40672567165447 39.0 35.0 40.0 30.0 41.0 43 34.724973366714764 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 9.0 12 5.0 13 2.0 14 4.0 15 8.0 16 11.0 17 26.0 18 60.0 19 149.0 20 288.0 21 638.0 22 1177.0 23 2202.0 24 3802.0 25 5997.0 26 9491.0 27 14151.0 28 20619.0 29 28857.0 30 38402.0 31 48854.0 32 62051.0 33 81333.0 34 109097.0 35 149531.0 36 220546.0 37 368312.0 38 687805.0 39 688496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.801591860049754 17.195739303805137 12.317166627588778 25.685502208556326 2 16.726057187997164 21.11181573700634 36.730683590277 25.431443484719495 3 18.733073898121585 23.03484121526461 30.344950218967305 27.887134667646503 4 13.484507059984296 14.896189197822759 34.87500845813342 36.744295284059525 5 14.626197711032397 37.08018153121327 34.33309781693609 13.960522940818244 6 35.32958395425212 35.50901440321771 14.896976000931575 14.264425641598594 7 29.722982361447908 30.514702989694452 21.41375143001465 18.34856321884299 8 27.834300838889476 35.909733226537924 19.30212924657308 16.95383668799952 9 26.84890862540776 13.645054234338291 18.643299663405628 40.862737476848324 10 15.052920377098994 27.704675026711968 34.3065038718581 22.935900724330942 11 36.75826103924102 20.994267352549166 21.831268499708095 20.416203108501723 12 21.041829600477115 25.14170323989784 31.56673742649292 22.24972973313212 13 31.717567582453032 18.919388874289318 24.861916054402712 24.501127488854934 14 21.71513636084679 19.190363864965704 27.607937584482983 31.486562189704525 15 25.044926457513416 27.999568831896372 22.642226463965205 24.313278246625007 16 24.106073647918198 25.999043247419678 24.891224470206126 25.003658634455995 17 23.85827000879646 26.455585751310423 26.50633455182908 23.17980968806404 18 23.821054221749442 25.614768609073728 26.95646461038297 23.60771255879386 19 24.688386628753246 25.92531979612358 26.87015230934581 22.51614126577737 20 24.006425034186595 25.79746429094091 26.70771680753065 23.48839386734185 21 23.4898887932486 26.21883669586755 26.93742397514961 23.353850535734235 22 23.922748523563968 25.656154452597473 26.414671989651968 24.006425034186595 23 23.30329843599278 25.58365054612004 26.843873085511333 24.269177932375847 24 23.402986389879825 25.646240733426385 26.905283068154457 24.04548980853933 25 23.80889811371823 25.532193622803444 26.634190057011754 24.024718206466577 26 23.484302491176003 25.88940223420611 27.05784419095397 23.568451083663923 27 23.98986282874601 26.153374677214025 26.595085942503577 23.26167655153639 28 23.65877608055605 26.34012239509161 26.61121540623431 23.38988611811803 29 23.462901446616197 26.44087253317555 26.869798247946836 23.226427772261413 30 23.624471465011652 26.29869721141242 26.681555604162504 23.395275719413423 31 23.38607012304027 25.72409490104377 26.965355485512593 23.924479490403364 32 22.980591140911717 26.16938612047844 26.95076028784405 23.899262450765796 33 23.403025730035264 25.622282578762924 26.888956903646516 24.085734787555293 34 23.573565303871227 25.755330984463786 27.1847948725615 23.486308839103483 35 23.507591863196968 25.825907223324624 26.95843161815501 23.7080692953234 36 23.271629610862917 25.737077152339243 27.17912989017802 23.812163346619815 37 23.03055313832156 25.349419260625382 27.260170610386115 24.35985699066694 38 22.94156570671442 25.406973908035308 27.586929941477585 24.06453044377269 39 22.68994607251492 25.27880368160911 27.957278164797483 24.073972081078487 40 23.03661152225945 25.21243683938044 28.067902681897078 23.683048956463036 41 22.57778728935314 25.065934100518817 28.21224171220945 24.144036897918593 42 22.193473310851747 25.352409112438885 28.20940922101771 24.244708355691653 43 22.05255687406272 24.821710415542196 28.03363740650812 25.092095303886964 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 268.0 1 422.5 2 577.0 3 3065.0 4 5553.0 5 5553.0 6 6865.0 7 8177.0 8 7521.0 9 6865.0 10 8404.0 11 9943.0 12 9943.0 13 15203.5 14 20464.0 15 31286.5 16 42109.0 17 34128.0 18 26147.0 19 26147.0 20 26755.5 21 27364.0 22 22278.5 23 17193.0 24 19434.5 25 21676.0 26 21676.0 27 25849.0 28 30022.0 29 34683.0 30 39344.0 31 45401.5 32 51459.0 33 51459.0 34 58922.5 35 66386.0 36 76768.5 37 87151.0 38 98748.0 39 110345.0 40 110345.0 41 123743.5 42 137142.0 43 150814.5 44 164487.0 45 179389.0 46 194291.0 47 194291.0 48 207908.5 49 221526.0 50 225548.0 51 229570.0 52 228378.0 53 227186.0 54 227186.0 55 214858.0 56 202530.0 57 185201.5 58 167873.0 59 152856.5 60 137840.0 61 137840.0 62 119882.5 63 101925.0 64 86307.0 65 70689.0 66 58239.0 67 45789.0 68 45789.0 69 36812.5 70 27836.0 71 22904.0 72 17972.0 73 14351.5 74 10731.0 75 10731.0 76 8445.0 77 6159.0 78 4838.5 79 3518.0 80 2711.5 81 1905.0 82 1905.0 83 1467.5 84 1030.0 85 787.0 86 544.0 87 379.5 88 215.0 89 215.0 90 148.5 91 82.0 92 57.0 93 32.0 94 22.5 95 13.0 96 13.0 97 8.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2541932.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.1407333196458 #Duplication Level Percentage of deduplicated Percentage of total 1 81.70825404768819 47.50577808600509 2 9.565687279560647 11.123121462801272 3 3.1940598236589643 5.571149412430521 4 1.5273413969117264 3.5520299538359987 5 0.9076383233830565 2.638537885525236 6 0.6039641546220536 2.106895130910368 7 0.42235310849732505 1.718914361350648 8 0.31999876136478084 1.4883970117701357 9 0.24903569316178173 1.3031206040873058 >10 1.4007109711888726 14.604949968733328 >50 0.07435715446393518 2.9132919098692813 >100 0.024296909784465723 2.46278959821039 >500 0.0014220555882499136 0.5284785611586955 >1k 6.094523949583342E-4 0.7062785449267903 >5k 2.031507983194447E-4 0.8843541265480552 >10k+ 6.771693277314823E-5 0.8919133818368641 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22654 0.8912118813563855 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8189 0.3221565329048928 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8184 0.3219598321276887 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6089 0.23954220647916624 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3217 0.12655728005312494 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3173 0.12482631321372878 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2841 0.1117653816073758 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1802046632246653E-4 2 0.0 0.0 0.0 0.0 1.1802046632246653E-4 3 0.0 0.0 0.0 0.0 1.1802046632246653E-4 4 0.0 0.0 0.0 0.0 1.967007772041109E-4 5 0.0 0.0 0.0 0.0 1.967007772041109E-4 6 0.0 0.0 0.0 0.0 2.3604093264493307E-4 7 0.0 0.0 0.0 0.0 2.3604093264493307E-4 8 0.0 0.0 0.0 0.0 2.3604093264493307E-4 9 0.0 0.0 0.0 0.0 3.540613989673996E-4 10 0.0 0.0 0.0 7.868031088164436E-5 3.540613989673996E-4 11 0.0 0.0 0.0 2.3604093264493307E-4 3.540613989673996E-4 12 0.0 0.0 0.0 3.934015544082218E-4 3.540613989673996E-4 13 0.0 0.0 0.0 5.114220207306883E-4 3.540613989673996E-4 14 3.934015544082218E-5 0.0 0.0 6.68782642493977E-4 3.540613989673996E-4 15 3.934015544082218E-5 0.0 0.0 9.0482357513891E-4 3.934015544082218E-4 16 3.934015544082218E-5 0.0 0.0 0.0014162455958695985 4.7208186528986613E-4 17 3.934015544082218E-5 0.0 0.0 0.002242388860126864 4.7208186528986613E-4 18 3.934015544082218E-5 0.0 0.0 0.0027931510362983747 5.507621761715105E-4 19 7.868031088164436E-5 0.0 0.0 0.0038946753886413958 5.507621761715105E-4 20 7.868031088164436E-5 0.0 0.0 0.0057830028498008605 5.507621761715105E-4 21 7.868031088164436E-5 0.0 0.0 0.008969555440507456 5.901023316123327E-4 22 7.868031088164436E-5 0.0 0.0 0.01337565284987954 5.901023316123327E-4 23 7.868031088164436E-5 0.0 0.0 0.019434036787766156 7.474629533756213E-4 24 7.868031088164436E-5 0.0 0.0 0.03088202202104541 7.474629533756213E-4 25 7.868031088164436E-5 0.0 0.0 0.04437569533724742 7.474629533756213E-4 26 7.868031088164436E-5 0.0 0.0 0.055705660104204205 7.474629533756213E-4 27 7.868031088164436E-5 0.0 0.0 0.07600518031166845 7.474629533756213E-4 28 7.868031088164436E-5 0.0 0.0 0.17337206502770333 7.474629533756213E-4 29 7.868031088164436E-5 0.0 0.0 0.3443050404180757 7.474629533756213E-4 30 7.868031088164436E-5 0.0 0.0 0.5556796956016132 7.474629533756213E-4 31 7.868031088164436E-5 0.0 0.0 1.0490052448295233 7.474629533756213E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAC 65 6.906335E-5 19.923077 3 TCGTTAC 255 0.0 16.686274 23 AGTCGGT 320 0.0 16.1875 11 CTTATAC 2935 0.0 15.884157 37 GTATAAG 295 0.0 15.677966 1 CGACGCG 95 7.065058E-5 15.578948 17 ATAACCG 95 7.065058E-5 15.578948 5 TTATACT 435 0.0 15.310344 4 GTTATAC 195 4.1836756E-11 15.179486 3 ATAGCAC 270 0.0 15.074075 3 GTTACGG 375 0.0 14.800001 25 CGCGAAC 75 0.0041062245 14.8 12 CTCGTTA 330 0.0 14.575757 22 CGTTACG 245 0.0 14.346938 24 AACGCAG 10750 0.0 14.318138 5 TATACTC 250 0.0 14.059999 5 ACCGTAT 80 0.0063013895 13.875001 8 CGGTGAT 360 0.0 13.875 14 GACTGCG 215 1.9826984E-10 13.767442 7 CGTAACG 135 6.5739932E-6 13.703704 14 >>END_MODULE