##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727400.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1292360 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36331440155994 33.0 31.0 34.0 31.0 34.0 2 32.508168776501904 34.0 31.0 34.0 31.0 34.0 3 32.60087127425795 34.0 31.0 34.0 31.0 34.0 4 36.12832028227429 37.0 35.0 37.0 35.0 37.0 5 35.93377696617042 37.0 35.0 37.0 35.0 37.0 6 35.94436689467331 37.0 35.0 37.0 35.0 37.0 7 35.913403386053425 37.0 35.0 37.0 35.0 37.0 8 35.868917329536664 37.0 35.0 37.0 35.0 37.0 9 37.709679965334736 39.0 37.0 39.0 35.0 39.0 10 37.52651351016745 39.0 37.0 39.0 35.0 39.0 11 37.63334132904144 39.0 37.0 39.0 35.0 39.0 12 37.5603887461698 39.0 37.0 39.0 35.0 39.0 13 37.644843542047106 39.0 37.0 39.0 35.0 39.0 14 38.89693274319849 40.0 38.0 41.0 36.0 41.0 15 38.81894131666099 40.0 38.0 41.0 35.0 41.0 16 38.79069531709431 40.0 38.0 41.0 35.0 41.0 17 38.71521789594231 40.0 38.0 41.0 35.0 41.0 18 38.68373208703457 40.0 38.0 41.0 35.0 41.0 19 38.72879073942245 40.0 38.0 41.0 35.0 41.0 20 38.6999450617475 40.0 38.0 41.0 34.0 41.0 21 38.656741155715125 40.0 38.0 41.0 34.0 41.0 22 38.61452072178031 40.0 38.0 41.0 34.0 41.0 23 38.553956327958154 40.0 38.0 41.0 34.0 41.0 24 38.50964437153734 40.0 38.0 41.0 34.0 41.0 25 38.40426583923984 40.0 38.0 41.0 34.0 41.0 26 38.292107462317 40.0 38.0 41.0 34.0 41.0 27 38.20345724101644 40.0 38.0 41.0 34.0 41.0 28 38.11681729549042 40.0 38.0 41.0 34.0 41.0 29 38.04106905196694 40.0 38.0 41.0 33.0 41.0 30 37.9803413909437 40.0 37.0 41.0 33.0 41.0 31 37.887864062645086 40.0 37.0 41.0 33.0 41.0 32 37.793992386022474 40.0 37.0 41.0 33.0 41.0 33 37.70300767587979 40.0 37.0 41.0 33.0 41.0 34 37.60520597975796 40.0 37.0 41.0 33.0 41.0 35 37.537776625708005 40.0 37.0 41.0 33.0 41.0 36 37.44728790739423 40.0 37.0 41.0 32.0 41.0 37 37.36695967068 40.0 37.0 41.0 32.0 41.0 38 37.275700269274815 40.0 36.0 41.0 32.0 41.0 39 37.17332554396608 39.0 36.0 41.0 31.0 41.0 40 37.05286762202482 39.0 36.0 41.0 31.0 41.0 41 36.948376613327554 39.0 36.0 41.0 31.0 41.0 42 36.832139651490294 39.0 36.0 41.0 31.0 41.0 43 35.16577501624934 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 5.0 12 2.0 13 0.0 14 0.0 15 0.0 16 5.0 17 15.0 18 20.0 19 56.0 20 135.0 21 236.0 22 544.0 23 912.0 24 1548.0 25 2602.0 26 3991.0 27 6019.0 28 8814.0 29 12577.0 30 16880.0 31 21914.0 32 29267.0 33 38475.0 34 52904.0 35 73548.0 36 108581.0 37 183395.0 38 357726.0 39 372186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.977993747872105 17.820421554365655 12.169751462440805 26.03183323532143 2 16.76932124175926 20.585363211489057 37.22198149122535 25.423334055526325 3 18.234006004518864 22.745132935095487 30.535841406419262 28.485019653966386 4 13.223792132223219 15.030022594323563 35.938902472995146 35.807282800458076 5 14.184902039679345 37.2422544801758 34.98258999040515 13.590253489739702 6 34.87054690643474 36.54136618279736 14.945603392243648 13.642483518524251 7 29.86404716951933 30.656937695378993 21.39388405707388 18.085131078027793 8 27.24720666068278 36.42421616267913 19.197746757869325 17.130830418768763 9 26.76019065894952 13.519452784053978 18.720093472407072 41.000263084589434 10 14.74411154786592 27.488702838218455 34.9084620384413 22.858723575474325 11 36.806462595561605 21.146816676467857 22.143210870036214 19.90350985793432 12 20.830418768764122 25.06453310223158 31.834009099631682 22.271039029372623 13 31.37330155684175 19.08763811940945 24.92571729239531 24.613343031353494 14 21.55962734841685 19.209585564393823 27.284657525766814 31.946129561422516 15 24.79997833421028 28.174347704973847 22.429973072518493 24.59570088829738 16 24.41262496517998 26.248258999040512 24.584558482156673 24.75455755362283 17 23.892104367204183 26.65720077996843 26.07245659104274 23.37823826178464 18 23.907038286545546 25.953062614132282 26.491225355164193 23.648673744157975 19 24.741867591073692 25.913986814819403 26.461202760840635 22.882942833266274 20 24.083459717106688 25.89882076201678 26.320839394595936 23.696880126280604 21 23.86393884057074 26.001501129716175 26.477684236590427 23.65687579312266 22 24.194496889411617 25.527097712711626 26.131728001485655 24.146677396391098 23 23.627781732644156 25.577470673806058 26.30644711999752 24.48830047355226 24 23.685428208858212 25.763873843201583 26.45114364418583 24.099554303754374 25 24.19813364697143 25.480516264817854 26.202064440248847 24.11928564796187 26 23.71320684638955 25.851156024637095 26.55274072239933 23.88289640657402 27 24.013742300906866 26.22992045560061 26.11656194868303 23.639775294809496 28 23.88042031632053 26.004364109071776 26.42313287319323 23.692082701414467 29 23.763270296202297 26.267139187223375 26.258627626977006 23.710962889597326 30 23.801185428208857 26.256770559286885 26.215528181002195 23.726515831502056 31 23.852409545327927 25.505122411711906 26.510879321551272 24.131588721408896 32 23.36864341205237 26.171577579002754 26.473351078646818 23.98642793029806 33 23.64635240954533 25.667074189854223 26.410133399362408 24.276440001238043 34 23.831208022532422 25.64718809000588 26.86534711690241 23.656256770559285 35 23.70515955306571 25.87119688012628 26.53339626729394 23.890247299514066 36 23.548005199789532 25.535609272958 26.806694729022873 24.109690798229597 37 23.551719335169764 25.112507350892937 26.79106440929772 24.544708904639574 38 23.24832090129685 25.165898046983813 27.272741341421895 24.313039710297442 39 23.12057011978087 25.08163360054474 27.50758302640131 24.290213253273084 40 23.23617258349067 24.973536785415828 27.78211953325699 24.008171097836517 41 22.784363490049213 24.84764307158996 28.053947816397905 24.314045621962922 42 22.550063449812747 25.00866631588721 27.87094927110093 24.57032096319911 43 22.388266427311276 24.431737286824102 27.94027979819864 25.239716487665977 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 114.0 1 146.5 2 179.0 3 912.0 4 1645.0 5 1645.0 6 2047.5 7 2450.0 8 2249.5 9 2049.0 10 2611.5 11 3174.0 12 3174.0 13 4974.0 14 6774.0 15 10543.5 16 14313.0 17 11854.5 18 9396.0 19 9396.0 20 10160.0 21 10924.0 22 9774.5 23 8625.0 24 10301.0 25 11977.0 26 11977.0 27 14906.5 28 17836.0 29 20465.0 30 23094.0 31 26820.5 32 30547.0 33 30547.0 34 35066.0 35 39585.0 36 45319.5 37 51054.0 38 57965.0 39 64876.0 40 64876.0 41 70615.5 42 76355.0 43 82196.0 44 88037.0 45 93759.5 46 99482.0 47 99482.0 48 104386.0 49 109290.0 50 111025.0 51 112760.0 52 110919.0 53 109078.0 54 109078.0 55 104047.5 56 99017.0 57 91297.0 58 83577.0 59 75642.5 60 67708.0 61 67708.0 62 59348.5 63 50989.0 64 42999.5 65 35010.0 66 29378.5 67 23747.0 68 23747.0 69 19309.5 70 14872.0 71 12445.5 72 10019.0 73 7982.5 74 5946.0 75 5946.0 76 4776.0 77 3606.0 78 2851.0 79 2096.0 80 1572.5 81 1049.0 82 1049.0 83 821.0 84 593.0 85 460.0 86 327.0 87 225.0 88 123.0 89 123.0 90 85.0 91 47.0 92 29.5 93 12.0 94 9.0 95 6.0 96 6.0 97 3.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1292360.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.3078262748916 #Duplication Level Percentage of deduplicated Percentage of total 1 85.0563204892368 54.69787081603342 2 7.916033356293509 10.1812579572554 3 2.477767022800167 4.780194337556655 4 1.2592727887746251 3.2392438293286743 5 0.7406020001032935 2.3813252380739924 6 0.5050749197889065 1.9488162118553884 7 0.34449247322843246 1.5507493484967245 8 0.2713709024589258 1.3961018281111321 9 0.19399966680286684 1.1228127183131054 >10 1.1608349917049614 13.26093155802015 >50 0.058431616280294495 2.4917687064801295 >100 0.014714303296013299 1.4502319903324428 >500 6.030384618140262E-4 0.3010110790671334 >1k 3.618230770884158E-4 0.5901554497866061 >5k 1.2060769236280525E-4 0.6075289312890637 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7833 0.6061004673620353 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2858 0.22114581076480236 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2811 0.2175090532049893 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1940 0.15011297161781548 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 7.737782042155437E-5 7 0.0 0.0 0.0 0.0 7.737782042155437E-5 8 0.0 0.0 0.0 0.0 7.737782042155437E-5 9 0.0 0.0 0.0 7.737782042155437E-5 7.737782042155437E-5 10 0.0 0.0 0.0 1.5475564084310874E-4 7.737782042155437E-5 11 0.0 0.0 0.0 3.8688910210777185E-4 7.737782042155437E-5 12 0.0 7.737782042155437E-5 0.0 4.6426692252932617E-4 7.737782042155437E-5 13 0.0 7.737782042155437E-5 0.0 4.6426692252932617E-4 7.737782042155437E-5 14 0.0 7.737782042155437E-5 0.0 4.6426692252932617E-4 7.737782042155437E-5 15 0.0 7.737782042155437E-5 0.0 6.19022563372435E-4 7.737782042155437E-5 16 7.737782042155437E-5 7.737782042155437E-5 0.0 9.285338450586523E-4 7.737782042155437E-5 17 7.737782042155437E-5 7.737782042155437E-5 0.0 0.0010832894859017612 7.737782042155437E-5 18 7.737782042155437E-5 7.737782042155437E-5 0.0 0.0011606673063233154 7.737782042155437E-5 19 7.737782042155437E-5 7.737782042155437E-5 0.0 0.001470178588009533 7.737782042155437E-5 20 7.737782042155437E-5 7.737782042155437E-5 0.0 0.002321334612646631 7.737782042155437E-5 21 7.737782042155437E-5 7.737782042155437E-5 0.0 0.003095112816862175 7.737782042155437E-5 22 7.737782042155437E-5 7.737782042155437E-5 0.0 0.005184313968244142 7.737782042155437E-5 23 7.737782042155437E-5 7.737782042155437E-5 0.0 0.007505648580890773 7.737782042155437E-5 24 7.737782042155437E-5 7.737782042155437E-5 0.0 0.011606673063233154 7.737782042155437E-5 25 7.737782042155437E-5 7.737782042155437E-5 0.0 0.014779163700516884 7.737782042155437E-5 26 7.737782042155437E-5 7.737782042155437E-5 0.0 0.018183787799065276 7.737782042155437E-5 27 7.737782042155437E-5 7.737782042155437E-5 0.0 0.03009997214398465 7.737782042155437E-5 28 7.737782042155437E-5 7.737782042155437E-5 0.0 0.1036089015444613 7.737782042155437E-5 29 7.737782042155437E-5 7.737782042155437E-5 0.0 0.23708564177164257 7.737782042155437E-5 30 7.737782042155437E-5 7.737782042155437E-5 0.0 0.4045312451638862 7.737782042155437E-5 31 7.737782042155437E-5 7.737782042155437E-5 0.0 0.8396267293942864 7.737782042155437E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 105 9.822543E-10 21.142859 5 CCGTATA 45 0.0038260624 20.555555 2 CGCGACA 55 5.14357E-4 20.181818 12 TGTTCGG 70 1.2193462E-4 18.5 10 TATACCG 60 9.2376635E-4 18.5 5 CGATACT 80 1.6169246E-5 18.5 4 GATAATC 100 2.875604E-7 18.499998 7 TAAGACT 240 0.0 17.729166 4 GGCCTAA 155 4.0017767E-10 16.709679 1 CTATACT 205 0.0 16.243902 4 TACGATA 80 3.3829737E-4 16.1875 2 TGAACCG 115 1.2424098E-6 16.086956 5 GCGTTCC 105 9.344814E-6 15.857144 9 TAATCGA 70 0.0025927275 15.857142 20 TAGGGTG 215 0.0 15.488372 5 CTTATAC 1245 0.0 15.4538145 37 AACGCAG 3340 0.0 15.453592 5 CGCGCCA 120 1.9358558E-6 15.416666 10 CGACCGT 85 5.364792E-4 15.235294 14 TATACTA 170 1.4861143E-9 15.235294 5 >>END_MODULE