##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727398.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2366783 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78413483618904 31.0 31.0 34.0 30.0 34.0 2 31.911978833716482 31.0 31.0 34.0 30.0 34.0 3 31.9901909047006 33.0 31.0 34.0 30.0 34.0 4 35.66487041693303 37.0 35.0 37.0 33.0 37.0 5 35.29841730314946 37.0 35.0 37.0 33.0 37.0 6 35.309842938706254 37.0 35.0 37.0 32.0 37.0 7 35.27749354292303 37.0 35.0 37.0 32.0 37.0 8 35.20764176521464 37.0 35.0 37.0 32.0 37.0 9 36.98490736159589 39.0 37.0 39.0 33.0 39.0 10 36.72122201317146 38.0 37.0 39.0 32.0 39.0 11 36.87549766919908 39.0 37.0 39.0 33.0 39.0 12 36.77951506327365 38.0 37.0 39.0 32.0 39.0 13 36.898172329275646 39.0 37.0 39.0 33.0 39.0 14 37.88555140036074 39.0 37.0 40.0 33.0 41.0 15 37.783518810131724 39.0 37.0 40.0 33.0 41.0 16 37.746103888696176 39.0 37.0 40.0 33.0 41.0 17 37.67104250791053 39.0 37.0 40.0 33.0 41.0 18 37.650621117356344 39.0 37.0 40.0 32.0 41.0 19 37.70217675215683 39.0 37.0 40.0 32.0 41.0 20 37.647286210860905 39.0 37.0 40.0 32.0 41.0 21 37.579419406003844 39.0 37.0 40.0 32.0 41.0 22 37.520504837156594 39.0 37.0 40.0 32.0 41.0 23 37.412126925028616 39.0 36.0 40.0 32.0 41.0 24 37.34677323607614 39.0 36.0 40.0 32.0 41.0 25 37.210049252508576 39.0 36.0 40.0 32.0 41.0 26 37.0342921171903 39.0 36.0 40.0 31.0 41.0 27 36.893994506467216 39.0 36.0 40.0 31.0 41.0 28 36.735702005633804 39.0 35.0 40.0 31.0 41.0 29 36.582999793390435 38.0 35.0 40.0 30.0 41.0 30 36.44769165572002 38.0 35.0 40.0 30.0 41.0 31 36.28502486286237 38.0 35.0 40.0 30.0 41.0 32 36.114007494561186 38.0 35.0 40.0 30.0 41.0 33 35.94150794559535 38.0 35.0 40.0 30.0 41.0 34 35.750751547564775 38.0 35.0 40.0 29.0 41.0 35 35.605774166875456 38.0 34.0 40.0 28.0 41.0 36 35.429242140069455 38.0 34.0 40.0 27.0 41.0 37 35.267179542864724 38.0 34.0 40.0 26.0 41.0 38 35.096473145193286 38.0 34.0 40.0 25.0 41.0 39 34.91432252132959 38.0 34.0 40.0 25.0 41.0 40 34.71209274361021 38.0 33.0 40.0 24.0 41.0 41 34.52398846873583 38.0 33.0 40.0 24.0 41.0 42 34.318734332636325 38.0 33.0 40.0 23.0 41.0 43 32.65235849674431 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 15.0 11 6.0 12 8.0 13 10.0 14 9.0 15 25.0 16 48.0 17 92.0 18 185.0 19 417.0 20 901.0 21 1684.0 22 2814.0 23 4921.0 24 7821.0 25 12296.0 26 18153.0 27 25879.0 28 35779.0 29 47289.0 30 59597.0 31 72828.0 32 90253.0 33 115180.0 34 150726.0 35 204902.0 36 299791.0 37 440535.0 38 548480.0 39 226133.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.38577596678698 18.362646681170176 13.756816742388297 23.494760609654538 2 16.522004763427827 23.73741065403968 36.28938521191001 23.451199370622486 3 19.13124270370372 25.161326577045717 30.632423842828004 25.075006876422552 4 13.74198648545304 15.900148006809243 34.46834796430429 35.88951754343343 5 14.726233879489586 37.842421548574585 33.6340086945022 13.79733587743363 6 33.92959979854511 35.9663306690981 15.332626607509011 14.771442924847777 7 28.285398365629632 30.774135186876023 22.59332604636758 18.34714040112676 8 27.64740155730373 35.646529487494206 20.311748056327936 16.394320898874128 9 26.244907116537515 14.240384521943922 19.87875525555152 39.63595310596704 10 15.036739743356279 28.51042955775836 34.24513358427874 22.20769711460662 11 34.984364853051595 22.07033766931738 22.39550478434229 20.549792693288737 12 20.47521889416985 26.757755146965312 31.627614360927893 21.139411597936945 13 31.46494630052692 19.3736392394233 25.751494750469305 23.409919709580475 14 21.06124642605596 20.311452296218118 29.33813535081163 29.289165926914297 15 24.563848903765155 28.891622087872022 23.76373330381366 22.78079570454917 16 22.607226771529117 26.449911124087 26.32577638085114 24.617085723532746 17 22.72747438189306 27.267603324850654 28.009369680279093 21.995552612977193 18 22.636084507958692 25.982736904904254 28.805175632916075 22.576002954220982 19 23.644964493998817 26.783824288073728 28.747798171611 20.823413046316457 20 22.65370336021511 26.963815440621296 28.384520253863577 21.99796094530001 21 21.980764607486194 27.822576045205665 28.533414343435794 21.663245003872344 22 22.371801724112434 27.15301740801755 27.952499236305144 22.52268163156487 23 21.708158289120718 26.82147032490938 28.453263353674586 23.017108032295315 24 21.94345658220462 26.934999955635984 28.64787350593612 22.473669956223276 25 22.297946199545965 26.802414923548124 28.375267187570643 22.524371689335272 26 22.00877731503057 27.151665361801232 29.006377010482158 21.833180312686036 27 22.72760113622584 27.444932636409845 28.490740384733197 21.336725842631115 28 22.13971454079229 27.772888346755913 28.411265418080156 21.67613169437164 29 21.90804987191475 27.788394626799327 28.75789626678914 21.54565923449678 30 21.736255499553614 27.794521086217028 28.76207915977088 21.707144254458477 31 21.77588735426949 27.08076743833296 28.79795063594761 22.34539457144994 32 21.23587164518251 27.52652017527589 28.704701698465808 22.53290648107579 33 21.926809513166184 27.053726514006566 28.446714379814285 22.572749593012965 34 22.111068061584017 27.243773510288015 28.751178287151802 21.89398014097617 35 22.01452351144993 27.299798925376766 28.535695921425834 22.14998164174747 36 21.69780668527702 27.202113586247663 28.83086451102615 22.26921521744917 37 21.30267117855756 26.999729168242293 28.787303271994098 22.91029638120605 38 21.397990436808108 26.986293208967616 29.15624288327236 22.45947347095192 39 21.092554746252613 26.95097100156626 29.33010757640223 22.626366675778893 40 21.4427769677237 27.057571395434227 29.458044949621492 22.041606687220586 41 21.199070637232058 26.723531477114715 29.40400535241296 22.673392533240268 42 20.700250086298574 27.0790351291183 29.27273011509716 22.947984669485965 43 20.631718243708868 26.51721767479317 28.957914603915945 23.893149477582018 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 691.0 1 864.0 2 1037.0 3 4458.5 4 7880.0 5 7880.0 6 10481.0 7 13082.0 8 12719.5 9 12357.0 10 14889.0 11 17421.0 12 17421.0 13 25844.0 14 34267.0 15 52289.5 16 70312.0 17 57071.0 18 43830.0 19 43830.0 20 43546.0 21 43262.0 22 33876.5 23 24491.0 24 26149.5 25 27808.0 26 27808.0 27 31985.5 28 36163.0 29 40069.0 30 43975.0 31 49046.5 32 54118.0 33 54118.0 34 60922.0 35 67726.0 36 76862.0 37 85998.0 38 96937.5 39 107877.0 40 107877.0 41 118048.0 42 128219.0 43 138954.5 44 149690.0 45 161515.0 46 173340.0 47 173340.0 48 184050.0 49 194760.0 50 196172.5 51 197585.0 52 195443.0 53 193301.0 54 193301.0 55 179995.0 56 166689.0 57 148770.5 58 130852.0 59 118862.0 60 106872.0 61 106872.0 62 92865.0 63 78858.0 64 66674.5 65 54491.0 66 45522.0 67 36553.0 68 36553.0 69 30050.5 70 23548.0 71 19921.5 72 16295.0 73 13059.5 74 9824.0 75 9824.0 76 7824.0 77 5824.0 78 4604.0 79 3384.0 80 2710.5 81 2037.0 82 2037.0 83 1650.0 84 1263.0 85 961.0 86 659.0 87 470.5 88 282.0 89 282.0 90 191.0 91 100.0 92 69.5 93 39.0 94 26.0 95 13.0 96 13.0 97 10.0 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2366783.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.13762201366631 #Duplication Level Percentage of deduplicated Percentage of total 1 84.14673522529232 48.92091086212106 2 8.249209534778725 9.591788516889952 3 2.7446990090295156 4.787108205847275 4 1.3346585522019176 3.103754977008889 5 0.7842363417870093 2.279681800409678 6 0.5128793975061597 1.7890553130486018 7 0.3845289006985885 1.5648917117501617 8 0.2781460403919281 1.2936599488723102 9 0.2194268498630918 1.1481259731290945 >10 1.2357641395560237 12.93130825385912 >50 0.06798807462847532 2.717149320207751 >100 0.03765361991459172 4.184532290709955 >500 0.002473690856350015 1.0648195068593707 >1k 0.0013096010415970065 1.6652450609972658 >5k 7.275561342205591E-5 0.3859304512824571 >10k+ 2.1826684026616774E-4 2.5720378070070553 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36102 1.5253616406742823 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12434 0.5253544579287581 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12271 0.5184674725143792 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9124 0.38550217742817994 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4531 0.19144129394203016 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4302 0.18176571320649168 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 4281 0.18087843287703181 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 3112 0.1314864945370995 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2844 0.12016310747542126 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 2794 0.11805053526242161 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.2251444259993416E-5 0.0 4 0.0 0.0 0.0 4.2251444259993416E-5 0.0 5 0.0 0.0 0.0 4.2251444259993416E-5 0.0 6 0.0 0.0 0.0 4.2251444259993416E-5 4.2251444259993416E-5 7 0.0 0.0 0.0 4.2251444259993416E-5 4.2251444259993416E-5 8 4.2251444259993416E-5 0.0 0.0 4.2251444259993416E-5 4.2251444259993416E-5 9 8.450288851998683E-5 0.0 0.0 4.2251444259993416E-5 4.2251444259993416E-5 10 2.535086655599605E-4 0.0 0.0 1.6900577703997366E-4 4.2251444259993416E-5 11 2.535086655599605E-4 0.0 0.0 5.492687753799145E-4 4.2251444259993416E-5 12 2.535086655599605E-4 0.0 0.0 0.0013520462163197893 4.2251444259993416E-5 13 2.535086655599605E-4 0.0 0.0 0.0014788005490997695 4.2251444259993416E-5 14 2.535086655599605E-4 0.0 0.0 0.0018168121031797168 4.2251444259993416E-5 15 2.535086655599605E-4 0.0 0.0 0.0026195895441195917 4.2251444259993416E-5 16 2.535086655599605E-4 0.0 0.0 0.004182892981739348 8.450288851998683E-5 17 2.535086655599605E-4 0.0 0.0 0.005999705084919065 8.450288851998683E-5 18 2.957601098199539E-4 0.0 0.0 0.0069292368586389205 8.450288851998683E-5 19 2.957601098199539E-4 0.0 0.0 0.009253066292938558 8.450288851998683E-5 20 2.957601098199539E-4 0.0 0.0 0.013942976605797828 8.450288851998683E-5 21 2.957601098199539E-4 0.0 0.0 0.020069436023496874 8.450288851998683E-5 22 2.957601098199539E-4 0.0 0.0 0.032660366412974914 8.450288851998683E-5 23 2.957601098199539E-4 0.0 0.0 0.048673663787512415 1.6900577703997366E-4 24 2.957601098199539E-4 0.0 0.0 0.07732014299578796 1.6900577703997366E-4 25 2.957601098199539E-4 0.0 0.0 0.10516384476312361 1.6900577703997366E-4 26 2.957601098199539E-4 0.0 0.0 0.12903591077001988 1.6900577703997366E-4 27 2.957601098199539E-4 0.0 0.0 0.16511864416805427 1.6900577703997366E-4 28 2.957601098199539E-4 0.0 0.0 0.31113963553059154 1.6900577703997366E-4 29 2.957601098199539E-4 0.0 0.0 0.5717887951704909 1.6900577703997366E-4 30 2.957601098199539E-4 0.0 0.0 0.8836467052535023 1.6900577703997366E-4 31 2.957601098199539E-4 0.0 0.0 1.4492245381177742 1.6900577703997366E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGATCG 85 2.7250904E-5 17.411764 5 TATACCG 135 2.2226232E-8 16.444445 5 GTATAAG 300 0.0 15.416667 1 CTCGTTA 350 0.0 15.328571 22 TCGTTAC 250 0.0 14.799999 23 ATACCGT 165 1.6474587E-8 14.575757 6 TTAATAC 440 0.0 14.295454 3 AACGCAG 17635 0.0 14.109725 5 TAAGAGT 395 0.0 14.050632 4 ACCCGAC 685 0.0 14.043796 11 CGTTACG 185 4.9058144E-9 14.000001 24 TAGGACT 360 0.0 13.875 4 TTATACT 470 0.0 13.776596 4 GCAATCG 135 6.5735367E-6 13.703704 23 TAATACT 325 0.0 13.661538 4 CCCGACT 750 0.0 13.566668 12 TATACAC 1770 0.0 13.48305 37 TCGGTGA 495 0.0 13.454546 13 GTACTAA 110 2.4580836E-4 13.454545 1 AACGACG 165 2.5983172E-7 13.454545 15 >>END_MODULE