##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727396.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 872056 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.361515774216336 33.0 31.0 34.0 31.0 34.0 2 32.5001605401488 34.0 31.0 34.0 31.0 34.0 3 32.59551106809654 34.0 31.0 34.0 31.0 34.0 4 36.115607254579984 37.0 35.0 37.0 35.0 37.0 5 35.92989326373536 37.0 35.0 37.0 35.0 37.0 6 35.950676332712575 37.0 35.0 37.0 35.0 37.0 7 35.911350876549214 37.0 35.0 37.0 35.0 37.0 8 35.86121189464897 37.0 35.0 37.0 35.0 37.0 9 37.69554822167384 39.0 37.0 39.0 35.0 39.0 10 37.52644440265304 39.0 37.0 39.0 35.0 39.0 11 37.634245965855406 39.0 37.0 39.0 35.0 39.0 12 37.55583357032117 39.0 37.0 39.0 35.0 39.0 13 37.638850027979856 39.0 37.0 39.0 35.0 39.0 14 38.88612084545029 40.0 38.0 41.0 36.0 41.0 15 38.81294549891292 40.0 38.0 41.0 35.0 41.0 16 38.784746621776584 40.0 38.0 41.0 35.0 41.0 17 38.72552680103113 40.0 38.0 41.0 35.0 41.0 18 38.69586012824865 40.0 38.0 41.0 35.0 41.0 19 38.743201124698416 40.0 38.0 41.0 35.0 41.0 20 38.70651196712138 40.0 38.0 41.0 35.0 41.0 21 38.657143577935365 40.0 38.0 41.0 34.0 41.0 22 38.618750401350376 40.0 38.0 41.0 34.0 41.0 23 38.55464442650472 40.0 38.0 41.0 34.0 41.0 24 38.51449677543644 40.0 38.0 41.0 34.0 41.0 25 38.39780472813673 40.0 38.0 41.0 34.0 41.0 26 38.297704505215265 40.0 38.0 41.0 34.0 41.0 27 38.20058344876934 40.0 38.0 41.0 34.0 41.0 28 38.114558010036056 40.0 38.0 41.0 34.0 41.0 29 38.02400304567597 40.0 37.0 41.0 33.0 41.0 30 37.952902107204125 40.0 37.0 41.0 33.0 41.0 31 37.8561067179172 40.0 37.0 41.0 33.0 41.0 32 37.75207555478089 40.0 37.0 41.0 33.0 41.0 33 37.6548937224215 40.0 37.0 41.0 33.0 41.0 34 37.55190033667563 40.0 37.0 41.0 33.0 41.0 35 37.46475685047749 40.0 37.0 41.0 32.0 41.0 36 37.369495766326935 40.0 37.0 41.0 32.0 41.0 37 37.27861169466181 40.0 36.0 41.0 32.0 41.0 38 37.18732856605539 39.0 36.0 41.0 31.0 41.0 39 37.07929421963727 39.0 36.0 41.0 31.0 41.0 40 36.964033273092554 39.0 36.0 41.0 31.0 41.0 41 36.8571766033374 39.0 36.0 41.0 31.0 41.0 42 36.73411340556111 39.0 36.0 41.0 30.0 41.0 43 35.071858917317236 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 0.0 11 1.0 12 0.0 13 1.0 14 1.0 15 1.0 16 6.0 17 6.0 18 15.0 19 36.0 20 91.0 21 168.0 22 373.0 23 646.0 24 1099.0 25 1837.0 26 2889.0 27 4226.0 28 6416.0 29 9122.0 30 11942.0 31 15408.0 32 20093.0 33 26200.0 34 35490.0 35 49020.0 36 73089.0 37 122834.0 38 235956.0 39 255087.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.57362829910006 17.584306512425808 12.082022255451484 25.760042933022646 2 16.605814305503316 20.969295549827073 37.04544203583256 25.37944810883705 3 18.27738126909281 23.189909822304987 30.660301632005282 27.872407276596917 4 13.20970212922106 14.957410991954646 35.69747814360545 36.13540873521884 5 14.219155650554551 37.372026567101194 34.867600245855776 13.541217536488482 6 35.10382360765823 36.20145953929564 14.93401799884411 13.760698854202024 7 29.876865705872103 30.832538277358335 21.488642931187904 17.80195308558166 8 27.608433403359417 36.27771610997459 19.360683258873284 16.753167227792712 9 27.006178502298017 13.426431330098069 18.705794123313183 40.861596044290735 10 14.439439669012083 27.91919326281798 35.057954993716 22.583412074453936 11 36.81357619235462 20.97330905354702 22.290655645967693 19.92245910813067 12 20.6892676617098 25.181295696606643 31.977762895960808 22.151673745722753 13 31.328836680213197 19.2073674167714 25.17372737530617 24.29006852770923 14 21.54643738475511 19.271583476290512 27.60132376819837 31.580655370756006 15 24.97695102149403 28.23442531213592 22.671938499362426 24.116685167007624 16 24.077696845156733 26.314479804049277 24.9576862036383 24.650137147155686 17 23.580939756162447 26.737847110736006 26.40851046263084 23.272702670470704 18 23.546996981845204 25.904758410010366 27.12773032924491 23.42051427889952 19 24.533172181603017 26.021264689423617 26.909625069949637 22.53593805902373 20 23.899153265386627 25.859119139137853 26.839102076013464 23.402625519462052 21 23.439435082150688 26.254277248250112 27.020168429550395 23.286119240048805 22 23.854202023723246 25.650187602631025 26.519168493766454 23.976441879879275 23 23.26719843679764 25.71864650893979 26.8645591567514 24.14959589751117 24 23.395401212766153 25.729998990890497 26.851715944847577 24.022883851495774 25 23.799962387736567 25.55810636014201 26.75286908180209 23.889062170319335 26 23.36833873054024 25.859004467602997 27.030718210757108 23.741938591099654 27 23.80558129294449 26.304159365912284 26.641981707596763 23.24827763354647 28 23.646187859495264 26.30129257754089 26.610332363976624 23.44218719898722 29 23.457438513123012 26.413097324025063 26.900566018696047 23.22889814415588 30 23.72473786087132 26.30966359958535 26.676153824983718 23.289444714559615 31 23.618781362664784 25.643421982074543 26.941159742034916 23.796636913225754 32 23.066867265404976 26.26310695643399 26.861692368380012 23.808333409781024 33 23.373154935004173 25.690093296760757 26.881301200840312 24.055450567394754 34 23.684602823671874 25.75568541469814 27.23357215591659 23.326139605713394 35 23.568784573467756 25.84501454035062 26.996431421835293 23.58976946434633 36 23.455718440100178 25.678052785600926 27.126468942361498 23.7397598319374 37 23.09438843377031 25.33266212261598 27.36716449402332 24.20578494959039 38 23.162617997009367 25.393208693019716 27.42083077233572 24.023342537635198 39 22.786839377287695 25.286678837138897 27.864380269157024 24.062101516416377 40 23.22683405652848 25.09712679002266 28.085466988358547 23.590572165090315 41 22.843716458576054 25.00986175199758 28.135693120625284 24.010728668801086 42 22.40372177933527 25.238746135569272 28.244057721063786 24.113474364031667 43 22.162452869999175 24.720086783417578 28.165393048152872 24.952067298430375 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 111.0 1 153.5 2 196.0 3 960.5 4 1725.0 5 1725.0 6 2044.0 7 2363.0 8 2049.0 9 1735.0 10 2238.5 11 2742.0 12 2742.0 13 4169.5 14 5597.0 15 8521.5 16 11446.0 17 9677.5 18 7909.0 19 7909.0 20 8353.0 21 8797.0 22 7533.5 23 6270.0 24 7261.5 25 8253.0 26 8253.0 27 9944.0 28 11635.0 29 13451.0 30 15267.0 31 17545.0 32 19823.0 33 19823.0 34 22754.0 35 25685.0 36 29308.5 37 32932.0 38 37423.5 39 41915.0 40 41915.0 41 46028.5 42 50142.0 43 54284.0 44 58426.0 45 62813.0 46 67200.0 47 67200.0 48 71118.0 49 75036.0 50 76535.5 51 78035.0 52 77267.0 53 76499.0 54 76499.0 55 72186.5 56 67874.0 57 61919.5 58 55965.0 59 50724.5 60 45484.0 61 45484.0 62 39542.0 63 33600.0 64 28054.0 65 22508.0 66 18532.5 67 14557.0 68 14557.0 69 11850.5 70 9144.0 71 7396.5 72 5649.0 73 4483.0 74 3317.0 75 3317.0 76 2614.0 77 1911.0 78 1494.0 79 1077.0 80 839.0 81 601.0 82 601.0 83 483.0 84 365.0 85 266.0 86 167.0 87 119.5 88 72.0 89 72.0 90 46.0 91 20.0 92 11.5 93 3.0 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 872056.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.54070184419518 #Duplication Level Percentage of deduplicated Percentage of total 1 85.52686587716958 58.62071413755551 2 7.85543134367763 10.768335551691079 3 2.568401893257938 5.281202051455762 4 1.24219926758678 3.4056483852297244 5 0.7068708348141999 2.422471156567871 6 0.48088199770347995 1.9775993776101102 7 0.3479630523688058 1.6694742277644474 8 0.23820794502935452 1.3061551789740338 9 0.17397037670981846 1.0731646547810987 >10 0.8250809291212033 9.534310097941043 >50 0.024927036847184766 1.1397383482982493 >100 0.0076940819252544175 0.8740381773597397 >500 8.363132160254951E-4 0.42968192493057406 >1k 5.01787929615297E-4 0.7803748300433344 >5k 1.6726264320509902E-4 0.7170918997974227 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6255 0.7172704505215262 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2591 0.29711394681075526 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2476 0.2839267203023659 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1740 0.19952847064867393 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 997 0.11432752025099305 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 936 0.10733255662480391 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2934306971111946E-4 2 0.0 0.0 0.0 0.0 2.2934306971111946E-4 3 0.0 0.0 0.0 0.0 2.2934306971111946E-4 4 0.0 0.0 0.0 0.0 2.2934306971111946E-4 5 0.0 0.0 0.0 0.0 2.2934306971111946E-4 6 0.0 0.0 0.0 0.0 2.2934306971111946E-4 7 0.0 0.0 0.0 0.0 2.2934306971111946E-4 8 0.0 0.0 0.0 1.1467153485555973E-4 2.2934306971111946E-4 9 0.0 0.0 0.0 1.1467153485555973E-4 3.440146045666792E-4 10 0.0 0.0 0.0 1.1467153485555973E-4 3.440146045666792E-4 11 0.0 0.0 0.0 2.2934306971111946E-4 3.440146045666792E-4 12 0.0 0.0 0.0 3.440146045666792E-4 3.440146045666792E-4 13 0.0 0.0 0.0 3.440146045666792E-4 3.440146045666792E-4 14 0.0 0.0 0.0 5.733576742777987E-4 3.440146045666792E-4 15 0.0 0.0 0.0 6.880292091333584E-4 3.440146045666792E-4 16 0.0 0.0 0.0 0.0010320438137000375 3.440146045666792E-4 17 0.0 0.0 0.0 0.0017200730228333961 3.440146045666792E-4 18 0.0 0.0 0.0 0.002178759162255635 3.440146045666792E-4 19 0.0 0.0 0.0 0.002981459906244553 3.440146045666792E-4 20 0.0 0.0 0.0 0.0035548175805223516 3.440146045666792E-4 21 0.0 0.0 0.0 0.004930875998789068 3.440146045666792E-4 22 0.0 0.0 0.0 0.007109635161044703 3.440146045666792E-4 23 0.0 0.0 0.0 0.010664452741567056 3.440146045666792E-4 24 0.0 0.0 0.0 0.02155824855284523 3.440146045666792E-4 25 0.0 0.0 0.0 0.032337372829267845 3.440146045666792E-4 26 0.0 0.0 0.0 0.04036438026915703 3.440146045666792E-4 27 0.0 0.0 0.0 0.05194620528956856 3.440146045666792E-4 28 0.0 0.0 0.0 0.09930554918491473 3.440146045666792E-4 29 0.0 0.0 0.0 0.18588255800086234 3.440146045666792E-4 30 0.0 0.0 0.0 0.29206839927711065 3.440146045666792E-4 31 0.0 0.0 0.0 0.6335602300769675 3.440146045666792E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGAC 70 1.9218169E-7 23.785713 3 ATAAGTC 45 0.0038250785 20.555557 3 TAGACAC 100 2.8729482E-7 18.5 5 GTAGCGC 50 0.0070335544 18.5 8 TCTAAAC 100 2.8729482E-7 18.5 3 GTATAGG 110 3.848436E-8 18.5 1 GTTATAT 70 1.21876954E-4 18.5 1 GACTATT 60 9.2343806E-4 18.5 7 CTTATAC 635 0.0 18.062992 37 TAACGCA 95 3.6043675E-6 17.526316 4 CGATCGC 75 2.0665463E-4 17.266666 19 TATACCG 65 0.001579521 17.076923 5 TAAGAGT 175 7.2759576E-12 16.914286 4 TTAGGGT 100 5.874519E-6 16.650002 4 GTATTAC 100 5.874519E-6 16.650002 1 TGGACCG 90 4.4439766E-5 16.444445 5 GGACCGA 80 3.381394E-4 16.1875 6 TTACACC 220 0.0 15.977273 4 TGGACTG 385 0.0 15.857142 5 GAATAGG 105 9.337848E-6 15.857142 1 >>END_MODULE