##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727394.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 954755 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39444045854696 33.0 31.0 34.0 31.0 34.0 2 32.54294557242434 34.0 31.0 34.0 31.0 34.0 3 32.63446748118627 34.0 31.0 34.0 31.0 34.0 4 36.154267848819856 37.0 35.0 37.0 35.0 37.0 5 35.96624369602673 37.0 35.0 37.0 35.0 37.0 6 35.97813260993658 37.0 35.0 37.0 35.0 37.0 7 35.941470848542295 37.0 35.0 37.0 35.0 37.0 8 35.90051793392022 37.0 35.0 37.0 35.0 37.0 9 37.739348838183616 39.0 37.0 39.0 35.0 39.0 10 37.57138742399883 39.0 37.0 39.0 35.0 39.0 11 37.68043424752947 39.0 37.0 39.0 35.0 39.0 12 37.60157108368115 39.0 37.0 39.0 35.0 39.0 13 37.672308602730546 39.0 37.0 39.0 35.0 39.0 14 38.94261878701866 40.0 38.0 41.0 36.0 41.0 15 38.871832040680594 40.0 38.0 41.0 36.0 41.0 16 38.84692303261046 40.0 38.0 41.0 35.0 41.0 17 38.780211677341306 40.0 38.0 41.0 35.0 41.0 18 38.747391739242005 40.0 38.0 41.0 35.0 41.0 19 38.79131819157794 40.0 38.0 41.0 35.0 41.0 20 38.754451141915986 40.0 38.0 41.0 35.0 41.0 21 38.72046964928175 40.0 38.0 41.0 35.0 41.0 22 38.67918575969751 40.0 38.0 41.0 34.0 41.0 23 38.61772077653429 40.0 38.0 41.0 34.0 41.0 24 38.5786782996685 40.0 38.0 41.0 34.0 41.0 25 38.47401898916476 40.0 38.0 41.0 34.0 41.0 26 38.37683489481595 40.0 38.0 41.0 34.0 41.0 27 38.29236296222591 40.0 38.0 41.0 34.0 41.0 28 38.20966844897382 40.0 38.0 41.0 34.0 41.0 29 38.14143837947955 40.0 38.0 41.0 34.0 41.0 30 38.087345968337424 40.0 38.0 41.0 33.0 41.0 31 38.00388057669245 40.0 37.0 41.0 33.0 41.0 32 37.91988834831972 40.0 37.0 41.0 33.0 41.0 33 37.83293829306995 40.0 37.0 41.0 33.0 41.0 34 37.748561672889906 40.0 37.0 41.0 33.0 41.0 35 37.699460070908245 40.0 37.0 41.0 33.0 41.0 36 37.61928871804808 40.0 37.0 41.0 33.0 41.0 37 37.546329686673545 40.0 37.0 41.0 33.0 41.0 38 37.46320050693633 40.0 37.0 41.0 32.0 41.0 39 37.36751836858671 40.0 37.0 41.0 32.0 41.0 40 37.268265680724376 40.0 37.0 41.0 31.0 41.0 41 37.17488465627307 39.0 36.0 41.0 31.0 41.0 42 37.07417609753288 39.0 36.0 41.0 31.0 41.0 43 35.428071075825734 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 0.0 14 1.0 15 4.0 16 5.0 17 9.0 18 14.0 19 39.0 20 84.0 21 168.0 22 329.0 23 598.0 24 1054.0 25 1773.0 26 2714.0 27 4181.0 28 6183.0 29 8732.0 30 11711.0 31 15877.0 32 20558.0 33 27235.0 34 36998.0 35 51734.0 36 76785.0 37 130565.0 38 261386.0 39 296014.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84580337364036 18.141303266282975 12.056286691350136 25.956606668726533 2 16.521725468837555 20.424716288471913 37.54366303397207 25.50989520871847 3 17.926902713261516 22.646961786007928 31.09488821739609 28.331247283334466 4 12.791344376305963 15.157710616859823 36.65882870474624 35.39211630208797 5 13.62632298338317 37.660761137674065 35.56703028525643 13.145885593686337 6 34.654335405418145 37.28401527093338 14.961325156715596 13.100324166932879 7 29.5491513529649 31.32143848421847 21.428115066168807 17.701295096647833 8 27.24133416426204 36.91439165021393 18.99429696623741 16.849977219286625 9 26.629973134469054 13.340176275589025 18.717890977266418 41.3119596126755 10 14.345669831527461 27.982780922854555 35.43359291127043 22.237956334347555 11 37.047095851815385 21.046760687296743 22.330545532623553 19.57559792826432 12 20.658598279139675 25.190965221444245 32.25141528454944 21.89902121486664 13 31.196275484286545 19.427078150939245 25.057004152897868 24.319642211876342 14 21.326832538190427 19.398379689030172 27.63431456237464 31.640473210404764 15 24.483034914716338 28.624725714973998 22.647380741656235 24.244858628653425 16 24.15185047472912 26.715440086723817 24.806049719561564 24.3266597189855 17 23.564265177977596 26.977706322564426 26.326439767270138 23.13158873218784 18 23.73991233353059 26.152258956486218 26.782263512628894 23.325565197354294 19 24.62286136233903 26.05317594566145 26.655424690103747 22.668538001895776 20 23.970652156836046 25.918795921466764 26.83107184565674 23.27948007604045 21 23.745149279134438 25.93733470890438 26.850029588742665 23.467486423218524 22 24.065231394441504 25.500259228807394 26.590277086791897 23.844232289959205 23 23.567826300988212 25.585516703238003 26.833690318458665 24.012966677315124 24 23.60427544239098 25.811124319851693 26.795565354462664 23.78903488329467 25 23.93556462129028 25.486747909149464 26.72308602730544 23.85460144225482 26 23.51514262821352 25.790490754172534 26.990379730925735 23.70398688668821 27 23.875863441406434 26.12397945022545 26.467732559661904 23.532424548706214 28 23.752481002979824 25.93115511309184 26.73691156369959 23.57945232022875 29 23.677906897581057 26.303816162261523 26.69847238296736 23.319804557190064 30 23.67403155783421 26.188393881152756 26.640342286764668 23.49723227424837 31 23.809249493325513 25.505600913323313 26.89464836528743 23.790501228063743 32 23.207524443443607 26.176244167351836 26.792108970364126 23.824122418840435 33 23.42904724248629 25.673497389382614 26.84364051510597 24.05381485302512 34 23.6831438431849 25.662395064702466 27.220595859670805 23.433865232441832 35 23.621871579619903 25.813638053741535 26.958120146006042 23.60637022063252 36 23.498279663369136 25.58321244717231 27.04128284219512 23.877225047263433 37 23.4403590449906 25.21599782143063 27.097003943420038 24.24663919015873 38 23.176626464380913 25.190336787971784 27.535336290461952 24.09770045718535 39 23.11105990542076 25.176406512665555 27.695796303763792 24.01673727814989 40 23.21412299490445 25.035008981361713 27.960052578933865 23.790815444799975 41 22.848793669580154 24.849516368073484 28.21865295285178 24.083037009494582 42 22.614911678912392 25.009662164639096 28.105011233248323 24.270414923200192 43 22.353483354368397 24.552267335599183 28.193306136129166 24.900943173903254 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 127.0 1 148.5 2 170.0 3 641.5 4 1113.0 5 1113.0 6 1379.0 7 1645.0 8 1464.0 9 1283.0 10 1632.5 11 1982.0 12 1982.0 13 3208.0 14 4434.0 15 7041.5 16 9649.0 17 7961.5 18 6274.0 19 6274.0 20 7174.5 21 8075.0 22 7444.5 23 6814.0 24 8282.0 25 9750.0 26 9750.0 27 11985.5 28 14221.0 29 16444.5 30 18668.0 31 21695.5 32 24723.0 33 24723.0 34 28189.5 35 31656.0 36 35980.5 37 40305.0 38 45124.0 39 49943.0 40 49943.0 41 54266.5 42 58590.0 43 62860.5 44 67131.0 45 71011.5 46 74892.0 47 74892.0 48 78406.0 49 81920.0 50 82805.0 51 83690.0 52 81460.5 53 79231.0 54 79231.0 55 75059.5 56 70888.0 57 65325.0 58 59762.0 59 54287.0 60 48812.0 61 48812.0 62 42431.0 63 36050.0 64 30237.5 65 24425.0 66 20002.5 67 15580.0 68 15580.0 69 12540.5 70 9501.0 71 7594.5 72 5688.0 73 4557.5 74 3427.0 75 3427.0 76 2640.0 77 1853.0 78 1496.0 79 1139.0 80 894.0 81 649.0 82 649.0 83 507.5 84 366.0 85 272.0 86 178.0 87 136.0 88 94.0 89 94.0 90 63.5 91 33.0 92 22.5 93 12.0 94 10.0 95 8.0 96 8.0 97 5.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 954755.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.93740102415649 #Duplication Level Percentage of deduplicated Percentage of total 1 86.01685203923867 60.15795075903768 2 7.670007676480342 10.72840805456729 3 2.4913551675747705 5.227167163448439 4 1.1374546401389858 3.1820248525675146 5 0.6825525078349584 2.3867974230248596 6 0.4433512692016511 1.8604101305234777 7 0.3047679992771195 1.4920277249341618 8 0.22207450749882787 1.2425051110550058 9 0.18035672609213044 1.1352312612098348 >10 0.8213649980941491 9.631674480275837 >50 0.02536245383602782 1.177219859106237 >100 0.0036000122148761382 0.39623161349807096 >500 3.0000083918292435E-4 0.14330213555305926 >1k 4.5000125877438647E-4 0.6436007332489155 >5k 1.5000041959146218E-4 0.5954486979496079 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5676 0.5944980649485994 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 2424 0.2538871228744547 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2192 0.22958769527260922 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1519 0.15909840744484188 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 1.0473891207692026E-4 8 0.0 0.0 0.0 0.0 1.0473891207692026E-4 9 0.0 0.0 0.0 0.0 1.0473891207692026E-4 10 0.0 0.0 0.0 0.0 1.0473891207692026E-4 11 0.0 0.0 0.0 0.0 1.0473891207692026E-4 12 0.0 0.0 0.0 1.0473891207692026E-4 1.0473891207692026E-4 13 0.0 0.0 0.0 2.094778241538405E-4 1.0473891207692026E-4 14 0.0 0.0 0.0 2.094778241538405E-4 1.0473891207692026E-4 15 0.0 0.0 0.0 2.094778241538405E-4 1.0473891207692026E-4 16 0.0 0.0 0.0 2.094778241538405E-4 1.0473891207692026E-4 17 0.0 0.0 0.0 3.142167362307608E-4 1.0473891207692026E-4 18 0.0 0.0 0.0 3.142167362307608E-4 2.094778241538405E-4 19 0.0 0.0 0.0 4.18955648307681E-4 2.094778241538405E-4 20 0.0 1.0473891207692026E-4 0.0 9.426502086922823E-4 2.094778241538405E-4 21 0.0 1.0473891207692026E-4 0.0 0.001675822593230724 2.094778241538405E-4 22 0.0 1.0473891207692026E-4 0.0 0.003351645186461448 2.094778241538405E-4 23 0.0 1.0473891207692026E-4 0.0 0.00418955648307681 2.094778241538405E-4 24 0.0 1.0473891207692026E-4 0.0 0.0058653790763075345 2.094778241538405E-4 25 0.0 1.0473891207692026E-4 0.0 0.007122246021230578 2.094778241538405E-4 26 0.0 1.0473891207692026E-4 0.0 0.008483851878230541 2.094778241538405E-4 27 0.0 1.0473891207692026E-4 0.0 0.01623453137192264 2.094778241538405E-4 28 0.0 1.0473891207692026E-4 0.0 0.058758529675152264 2.094778241538405E-4 29 0.0 1.0473891207692026E-4 0.0 0.13794114720530398 2.094778241538405E-4 30 0.0 1.0473891207692026E-4 0.0 0.2378620693266859 2.094778241538405E-4 31 0.0 1.0473891207692026E-4 0.0 0.5538593670627543 2.094778241538405E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAAGAC 80 6.95758E-7 20.8125 3 TATACTG 185 0.0 18.0 5 TAGACTG 170 5.456968E-12 17.411764 5 CTTATAC 640 0.0 17.34375 37 GGGTAAG 225 0.0 17.266665 1 GCGACGT 65 0.0015796686 17.076925 33 GGCGAAA 65 0.0015796686 17.076925 10 CAGGACT 325 0.0 17.076923 4 GGTATCA 1355 0.0 16.247232 1 GTTACGG 70 0.0025920628 15.857142 25 GTACTAA 70 0.0025920628 15.857142 1 GCCTAAA 105 9.339703E-6 15.857142 1 TAGAGTG 165 9.731593E-10 15.69697 5 GCGAAAG 95 7.057675E-5 15.578948 11 ACCCGAC 215 0.0 15.488372 11 GTATTGG 205 5.456968E-12 15.341463 1 ATTAGAC 85 5.36297E-4 15.235294 3 GAATCCG 85 5.36297E-4 15.235294 5 CTAGTAC 85 5.36297E-4 15.235294 3 CCTACAC 220 1.8189894E-12 15.136364 3 >>END_MODULE