SRR2727393.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727393.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	832211
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	18155	2.1815380955070287	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	6187	0.7434412666979888	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6178	0.7423598101923671	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5047	0.6064567759858978	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	2461	0.2957182733705755	No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2393	0.2875472686614332	No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1972	0.2369591365651259	No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1726	0.20739932541146416	No Hit
GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA	1291	0.1551289276397452	No Hit
GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	861	0.10345933903781614	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTACG	20	0.0018416442	37.0	1
CGAACCG	25	0.0054954826	29.6	18
ATTGCGA	35	8.86733E-4	26.42857	10
GTATTCG	40	0.0019307417	23.125	5
GTAATAC	50	2.7012342E-4	22.2	3
CGCTATC	50	2.7012342E-4	22.2	33
ACCGCTA	85	5.17648E-8	21.764706	8
TAGTACA	60	3.724696E-5	21.583334	4
ACCGTGA	125	1.8189894E-11	20.72	8
CCGCTAC	90	9.4703864E-8	20.555555	9
AACCGTC	60	9.2338957E-4	18.5	7
TAATAGT	80	1.6157968E-5	18.5	4
GGTCACG	50	0.007033291	18.5	11
TATTCGT	50	0.007033291	18.5	6
GGCGATC	50	0.007033291	18.5	34
CTAGCAC	80	1.6157968E-5	18.5	3
TAATACC	75	2.0664027E-4	17.266666	4
CCTAGAC	75	2.0664027E-4	17.266666	3
CACGATC	130	1.391345E-8	17.076923	26
ACGATCC	120	1.0401527E-7	16.958334	27