##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727393.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 832211 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.301685510044926 33.0 31.0 34.0 30.0 34.0 2 32.41442014104596 34.0 31.0 34.0 31.0 34.0 3 32.504924832764765 34.0 31.0 34.0 30.0 34.0 4 36.02554520428112 37.0 35.0 37.0 35.0 37.0 5 35.851562884893376 37.0 35.0 37.0 35.0 37.0 6 35.89219320580958 37.0 35.0 37.0 35.0 37.0 7 35.850333629331985 37.0 35.0 37.0 35.0 37.0 8 35.82572088088237 37.0 35.0 37.0 35.0 37.0 9 37.645297887194474 39.0 37.0 39.0 35.0 39.0 10 37.47753995080574 39.0 37.0 39.0 35.0 39.0 11 37.598535707891386 39.0 37.0 39.0 35.0 39.0 12 37.529899268334596 39.0 37.0 39.0 35.0 39.0 13 37.61344418663055 39.0 37.0 39.0 35.0 39.0 14 38.74101760250706 40.0 38.0 41.0 35.0 41.0 15 38.669456423911726 40.0 38.0 41.0 35.0 41.0 16 38.65487959183428 40.0 38.0 41.0 34.0 41.0 17 38.63771207061671 40.0 38.0 41.0 34.0 41.0 18 38.65029902272381 40.0 38.0 41.0 34.0 41.0 19 38.71652020941804 40.0 38.0 41.0 34.0 41.0 20 38.675003094167224 40.0 38.0 41.0 34.0 41.0 21 38.62502057771407 40.0 38.0 41.0 34.0 41.0 22 38.55714115771121 40.0 38.0 41.0 34.0 41.0 23 38.467184403955244 40.0 38.0 41.0 34.0 41.0 24 38.414257922570116 40.0 38.0 41.0 34.0 41.0 25 38.28825622348179 40.0 38.0 41.0 34.0 41.0 26 38.14105677526493 40.0 37.0 41.0 34.0 41.0 27 38.02200643827106 40.0 37.0 41.0 33.0 41.0 28 37.889388628605005 40.0 37.0 41.0 33.0 41.0 29 37.73046378863053 40.0 37.0 41.0 33.0 41.0 30 37.60093413809719 39.0 37.0 41.0 33.0 41.0 31 37.4208908558046 39.0 36.0 41.0 33.0 41.0 32 37.262206339498036 39.0 35.0 41.0 32.0 41.0 33 37.0929728157883 39.0 35.0 41.0 32.0 41.0 34 36.91341138244989 39.0 35.0 41.0 31.0 41.0 35 36.75226475016552 39.0 35.0 41.0 31.0 41.0 36 36.59302869104109 39.0 35.0 41.0 31.0 41.0 37 36.423936958295435 39.0 35.0 41.0 30.0 41.0 38 36.2597886833988 39.0 35.0 40.0 30.0 41.0 39 36.0693045393536 39.0 35.0 40.0 29.0 41.0 40 35.85366211213262 39.0 35.0 40.0 28.0 41.0 41 35.64382590472849 39.0 35.0 40.0 26.0 41.0 42 35.41942848628533 39.0 35.0 40.0 25.0 41.0 43 33.83321657608467 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 4.0 13 4.0 14 5.0 15 6.0 16 11.0 17 21.0 18 27.0 19 66.0 20 95.0 21 276.0 22 498.0 23 871.0 24 1477.0 25 2330.0 26 3835.0 27 5718.0 28 8225.0 29 11247.0 30 14474.0 31 18102.0 32 22645.0 33 29178.0 34 38291.0 35 51518.0 36 76376.0 37 129087.0 38 205400.0 39 212419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.63878631741229 17.678209011897223 13.563267008006383 23.119737662684102 2 16.098801866353604 24.262837189126316 36.136748973517534 23.501611971002546 3 19.144183386184512 24.952926601546963 31.430130099217624 24.472759913050897 4 12.83304354304377 15.319191887634265 35.03510527979083 36.81265928953114 5 14.43612256987711 38.95418349433017 33.43707304998372 13.172620885809009 6 33.574778511699556 36.439196309589754 15.096892494812012 14.889132683898676 7 27.99374197168747 31.175026525724846 22.338685741957267 18.492545760630417 8 28.89615734471186 35.21835207657673 19.59406929252317 16.29142128618824 9 26.304266586238345 13.916422638008871 19.83271069476371 39.94660008098908 10 14.844552643500267 29.45082437026187 33.81546266511738 21.889160321120485 11 35.032461719443745 22.64581938955385 22.03191257986256 20.289806311139845 12 20.537459850927227 27.259553166204242 31.907653227366616 20.29533375550191 13 32.17224958574208 19.35855209796554 25.87552916267629 22.593669153616087 14 20.9378390816752 20.798090868782076 30.353119581452297 27.910950468090423 15 24.166587560125976 29.621574336316154 24.448727546259303 21.76311055729857 16 21.7575831129365 26.76676948514259 26.9357170236875 24.539930378233404 17 22.253370839847104 27.549023024209006 28.850495847807828 21.34711028813606 18 21.911149936734795 25.715834085346145 29.93952254896895 22.43349342895011 19 23.03213968572874 26.767850941648213 29.938921739799163 20.261087632823887 20 21.88291190575467 27.22074089383582 29.70869166593568 21.18765553447383 21 21.322477112174674 27.88884069064216 29.814554241652658 20.97412795553051 22 21.739678999676766 27.52547130475324 29.04924352117432 21.685606174395677 23 21.250139688131974 27.073302323569383 29.400116076331607 22.276441911967037 24 21.077587294568325 27.40867400214609 29.79809207040042 21.715646632885168 25 21.374867671780354 27.232396591729742 29.66014628501666 21.732589451473245 26 21.058601724802966 27.699225316656474 30.229112568807672 21.013060389732892 27 21.68836989657671 28.06848263240933 29.755554781179296 20.48759268983467 28 21.235359782555147 28.210754243815572 29.61869045230116 20.935195521328126 29 20.88989450992597 28.43978269933947 29.844835023810067 20.825487766924493 30 20.513427484135637 28.77239065573514 29.87439483496373 20.839787025165492 31 20.744018043500986 27.75449976027714 29.843272919968616 21.658209276253256 32 20.317563694784134 28.452760177406933 29.73020063421416 21.499475493594776 33 20.913446229381734 27.949041769455103 29.557528078816553 21.579983922346617 34 20.99852080782398 28.0333953768936 29.98410258936736 20.983981225915063 35 20.91464784772131 28.290541701563665 29.612442036935345 21.182368413779677 36 20.609917436803887 27.856517157307465 30.05968438292693 21.473881022961724 37 20.34171622340969 27.73491338134199 29.78283151748775 22.14053887776057 38 20.233450411013553 27.623403199428992 30.46042409917677 21.682722290380685 39 20.109924045704755 27.421411156545634 30.640066040943942 21.82859875680567 40 20.317563694784134 27.473801716151314 30.82535558890714 21.383279000157412 41 19.937131328473185 27.214372316636045 30.94996341072156 21.898532944169208 42 19.305560729190073 27.466231520611963 30.787144125708505 22.441063624489463 43 18.936904222607005 26.84271176420403 30.920043114066026 23.30034089912294 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 401.0 1 415.0 2 429.0 3 1918.0 4 3407.0 5 3407.0 6 4361.5 7 5316.0 8 4742.5 9 4169.0 10 5420.0 11 6671.0 12 6671.0 13 10774.0 14 14877.0 15 23223.5 16 31570.0 17 24498.0 18 17426.0 19 17426.0 20 17917.0 21 18408.0 22 14034.5 23 9661.0 24 11012.0 25 12363.0 26 12363.0 27 13991.5 28 15620.0 29 17230.5 30 18841.0 31 20084.5 32 21328.0 33 21328.0 34 23285.5 35 25243.0 36 27866.0 37 30489.0 38 33805.0 39 37121.0 40 37121.0 41 40972.0 42 44823.0 43 48243.0 44 51663.0 45 54850.0 46 58037.0 47 58037.0 48 62064.0 49 66091.0 50 65900.5 51 65710.0 52 64653.5 53 63597.0 54 63597.0 55 58358.5 56 53120.0 57 48385.0 58 43650.0 59 39730.5 60 35811.0 61 35811.0 62 30865.0 63 25919.0 64 21758.5 65 17598.0 66 14662.5 67 11727.0 68 11727.0 69 9529.5 70 7332.0 71 6091.5 72 4851.0 73 4019.0 74 3187.0 75 3187.0 76 2651.5 77 2116.0 78 1767.5 79 1419.0 80 1190.0 81 961.0 82 961.0 83 770.5 84 580.0 85 473.5 86 367.0 87 274.5 88 182.0 89 182.0 90 136.5 91 91.0 92 54.5 93 18.0 94 16.5 95 15.0 96 15.0 97 10.5 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 832211.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.2715455368551 #Duplication Level Percentage of deduplicated Percentage of total 1 87.03707555268757 56.81044440331945 2 7.277350160437754 9.500077847693053 3 2.2320076499901944 4.370597668948318 4 1.0698342435158252 2.7931893817012052 5 0.621240065594428 2.027464961538278 6 0.3871703909411746 1.5162725881703323 7 0.25656019762900845 1.1722256435740461 8 0.18551019212375897 0.9686829562205337 9 0.14886527115090176 0.8744999692304131 >10 0.7091557423955859 8.225363041839934 >50 0.0425946356011965 1.9241094275583621 >100 0.02931699307356683 3.625424241231831 >500 0.0016594524295735645 0.7265531165082125 >1k 9.21918016429758E-4 1.18460532148258 >5k 5.531508098578548E-4 2.09553468024532 >10k+ 1.843836032859516E-4 2.184954750738214 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18155 2.1815380955070287 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6187 0.7434412666979888 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6178 0.7423598101923671 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5047 0.6064567759858978 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2461 0.2957182733705755 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2393 0.2875472686614332 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1972 0.2369591365651259 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1726 0.20739932541146416 No Hit GTACGGGAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAA 1291 0.1551289276397452 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 861 0.10345933903781614 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.201618339579746E-4 0.0 5 0.0 0.0 0.0 1.201618339579746E-4 0.0 6 0.0 0.0 0.0 1.201618339579746E-4 0.0 7 0.0 0.0 0.0 1.201618339579746E-4 0.0 8 0.0 0.0 0.0 2.403236679159492E-4 0.0 9 0.0 0.0 0.0 2.403236679159492E-4 0.0 10 0.0 0.0 0.0 3.604855018739238E-4 0.0 11 0.0 0.0 0.0 7.209710037478476E-4 0.0 12 1.201618339579746E-4 0.0 0.0 0.0015621038414536698 0.0 13 1.201618339579746E-4 0.0 0.0 0.001802427509369619 0.0 14 1.201618339579746E-4 0.0 0.0 0.0020427511772855684 1.201618339579746E-4 15 1.201618339579746E-4 0.0 0.0 0.002763722181033416 2.403236679159492E-4 16 2.403236679159492E-4 0.0 0.0 0.004085502354571137 3.604855018739238E-4 17 2.403236679159492E-4 0.0 0.0 0.005407282528108857 3.604855018739238E-4 18 2.403236679159492E-4 0.0 0.0 0.006248415365814679 3.604855018739238E-4 19 2.403236679159492E-4 0.0 0.0 0.007329871871436451 3.604855018739238E-4 20 2.403236679159492E-4 0.0 0.0 0.011535536059965561 3.604855018739238E-4 21 2.403236679159492E-4 0.0 0.0 0.01742346592390632 3.604855018739238E-4 22 2.403236679159492E-4 0.0 0.0 0.031963047832821244 3.604855018739238E-4 23 2.403236679159492E-4 0.0 0.0 0.03953324337217364 3.604855018739238E-4 24 2.403236679159492E-4 0.0 0.0 0.0525107214396349 3.604855018739238E-4 25 2.403236679159492E-4 0.0 0.0 0.06224382999023084 3.604855018739238E-4 26 2.403236679159492E-4 0.0 0.0 0.07173661487291083 3.604855018739238E-4 27 2.403236679159492E-4 0.0 0.0 0.08903991896285918 3.604855018739238E-4 28 2.403236679159492E-4 0.0 0.0 0.1906968304913057 3.604855018739238E-4 29 2.403236679159492E-4 0.0 0.0 0.40085987808380324 3.604855018739238E-4 30 2.403236679159492E-4 0.0 0.0 0.6403424131620467 3.604855018739238E-4 31 2.403236679159492E-4 0.0 0.0 1.2151966268169971 3.604855018739238E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTACG 20 0.0018416442 37.0 1 CGAACCG 25 0.0054954826 29.6 18 ATTGCGA 35 8.86733E-4 26.42857 10 GTATTCG 40 0.0019307417 23.125 5 GTAATAC 50 2.7012342E-4 22.2 3 CGCTATC 50 2.7012342E-4 22.2 33 ACCGCTA 85 5.17648E-8 21.764706 8 TAGTACA 60 3.724696E-5 21.583334 4 ACCGTGA 125 1.8189894E-11 20.72 8 CCGCTAC 90 9.4703864E-8 20.555555 9 AACCGTC 60 9.2338957E-4 18.5 7 TAATAGT 80 1.6157968E-5 18.5 4 GGTCACG 50 0.007033291 18.5 11 TATTCGT 50 0.007033291 18.5 6 GGCGATC 50 0.007033291 18.5 34 CTAGCAC 80 1.6157968E-5 18.5 3 TAATACC 75 2.0664027E-4 17.266666 4 CCTAGAC 75 2.0664027E-4 17.266666 3 CACGATC 130 1.391345E-8 17.076923 26 ACGATCC 120 1.0401527E-7 16.958334 27 >>END_MODULE