##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727391.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7316270 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34456574183293 33.0 31.0 34.0 31.0 34.0 2 32.48668023460042 34.0 31.0 34.0 31.0 34.0 3 32.577591040243185 34.0 31.0 34.0 31.0 34.0 4 36.10769080419394 37.0 35.0 37.0 35.0 37.0 5 35.91634576088635 37.0 35.0 37.0 35.0 37.0 6 35.9310491548289 37.0 35.0 37.0 35.0 37.0 7 35.89302486102891 37.0 35.0 37.0 35.0 37.0 8 35.84856723439676 37.0 35.0 37.0 35.0 37.0 9 37.687906542541484 39.0 37.0 39.0 35.0 39.0 10 37.513146863087336 39.0 37.0 39.0 35.0 39.0 11 37.6259587194021 39.0 37.0 39.0 35.0 39.0 12 37.550876471207324 39.0 37.0 39.0 35.0 39.0 13 37.62795099142049 39.0 37.0 39.0 35.0 39.0 14 38.85414001943613 40.0 38.0 41.0 36.0 41.0 15 38.77905886469471 40.0 38.0 41.0 35.0 41.0 16 38.74648775947306 40.0 38.0 41.0 35.0 41.0 17 38.69410751653506 40.0 38.0 41.0 35.0 41.0 18 38.65918152282516 40.0 38.0 41.0 35.0 41.0 19 38.71931161643843 40.0 38.0 41.0 35.0 41.0 20 38.67788053201973 40.0 38.0 41.0 34.0 41.0 21 38.63484617161477 40.0 38.0 41.0 34.0 41.0 22 38.59949113414349 40.0 38.0 41.0 34.0 41.0 23 38.53103070280348 40.0 38.0 41.0 34.0 41.0 24 38.48902090819502 40.0 38.0 41.0 34.0 41.0 25 38.37375329231972 40.0 38.0 41.0 34.0 41.0 26 38.26202873868788 40.0 38.0 41.0 34.0 41.0 27 38.171250650946455 40.0 38.0 41.0 34.0 41.0 28 38.07364927756903 40.0 38.0 41.0 33.0 41.0 29 37.98930985324489 40.0 37.0 41.0 33.0 41.0 30 37.92483382925999 40.0 37.0 41.0 33.0 41.0 31 37.820072933338984 40.0 37.0 41.0 33.0 41.0 32 37.72005899180867 40.0 37.0 41.0 33.0 41.0 33 37.61989442707828 40.0 37.0 41.0 33.0 41.0 34 37.51725360053688 40.0 37.0 41.0 32.0 41.0 35 37.450597230556006 40.0 37.0 41.0 32.0 41.0 36 37.35033275152502 40.0 36.0 41.0 32.0 41.0 37 37.27277027775082 40.0 36.0 41.0 32.0 41.0 38 37.17881229096247 39.0 36.0 41.0 31.0 41.0 39 37.061464926800134 39.0 36.0 41.0 31.0 41.0 40 36.94773853343302 39.0 36.0 41.0 31.0 41.0 41 36.832776537771295 39.0 36.0 41.0 31.0 41.0 42 36.71967778663171 39.0 36.0 41.0 30.0 41.0 43 35.01902554170363 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 19.0 11 19.0 12 24.0 13 25.0 14 18.0 15 24.0 16 46.0 17 84.0 18 180.0 19 364.0 20 837.0 21 1649.0 22 3214.0 23 5704.0 24 10097.0 25 15616.0 26 24268.0 27 36374.0 28 52335.0 29 74189.0 30 100052.0 31 130852.0 32 169815.0 33 223327.0 34 304153.0 35 419175.0 36 619801.0 37 1040476.0 38 1998338.0 39 2085184.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.950305278509404 17.36004822129309 12.470712535212614 26.218933964984892 2 16.650615682581424 20.743958328492525 37.152879814440965 25.452546174485086 3 18.27282208010366 22.471532625231163 31.17438257472729 28.081262719937893 4 13.374123699644763 15.071012961522742 35.43654075095643 36.118322587876065 5 14.172686355205592 37.38928443045432 34.77744807121662 13.660581143123476 6 34.856409071835785 36.19829503285144 14.999719802576998 13.945576092735779 7 29.44310420473821 31.424482694050383 21.120338642504993 18.01207445870642 8 27.531214676330972 36.41268023186679 19.160979570190822 16.895125521611423 9 27.22261480235147 13.529380408322819 18.49130772921174 40.756697060113964 10 14.75270868899043 27.853168349445824 34.5450892326281 22.849033728935648 11 36.941282921488686 21.196374655391338 21.874698446066095 19.98764397705388 12 21.012797504739435 25.120737752980688 31.44364546415045 22.42281927812943 13 31.45396493021717 19.259322031581664 24.798961766036516 24.48775127216464 14 21.519818158706556 19.563766782800528 27.53362027371871 31.38279478477421 15 25.116787652724682 28.19234391295018 22.64648516252134 24.044383271803802 16 23.822056867775522 26.526508726441207 24.985340890918458 24.666093514864816 17 23.682586891954507 26.601041240960217 26.175592207504643 23.540779659580632 18 23.59373013844486 26.10218048267765 26.840329840205463 23.463759538672026 19 24.880273691375525 25.855770768438013 26.75124072785723 22.512714812329232 20 23.851334081437674 25.662393542064464 26.793953749656584 23.69231862684127 21 23.552944328189092 26.07876691264811 27.189483165602148 23.178805593560654 22 24.26916994588773 25.275912452656886 26.323317756179037 24.131599845276348 23 23.364815677934246 25.529593631727643 27.00477155709125 24.10081913324686 24 23.313901755949413 25.36696978104963 27.154684012481773 24.164444450519184 25 23.783293946232163 25.247619347016993 26.784960095786513 24.18412661096433 26 23.314257128290784 25.6264599310851 27.266065905167526 23.793217035456593 27 23.994439789674246 26.118937655389974 26.569973497424233 23.316649057511547 28 23.5604481518588 26.392806717083978 26.344312060653856 23.702433070403362 29 23.410850064308725 26.443050898886998 26.833564097552443 23.31253493925183 30 24.023347962828055 26.016385398570584 26.441902772861038 23.51836386574033 31 23.582153201016364 25.522882561742527 26.9243343944387 23.970629842802413 32 23.013311427817726 26.079504993664806 26.925209157125146 23.981974421392323 33 23.370064254052952 25.29716645230425 26.97866535816748 24.35410393547532 34 23.580321666641606 25.434340176073327 27.672133477851418 23.313204679433646 35 23.49352880634531 25.37828702330559 27.12397164128716 24.00421252906194 36 23.097274977550036 25.140023536583534 27.7216669149717 24.04103457089473 37 22.868469862375225 24.844736457238454 27.75134050547615 24.535453174910167 38 23.000189987520965 24.636447260694318 28.086196928216157 24.277165823568566 39 22.419128873045967 24.63277052377783 28.773432363759127 24.17466823941708 40 23.002035190062696 24.38604644169775 28.726085833354976 23.885832534884578 41 22.23590709473543 24.495118414164597 29.07985899918948 24.189115491910496 42 21.857626905513328 24.714096117283805 29.015686955238117 24.412590021964746 43 21.363085287995112 24.17054045299039 28.79573881226363 25.67063544675087 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 860.0 1 1234.5 2 1609.0 3 6428.0 4 11247.0 5 11247.0 6 13952.5 7 16658.0 8 15073.0 9 13488.0 10 17594.5 11 21701.0 12 21701.0 13 33627.0 14 45553.0 15 72730.0 16 99907.0 17 80740.5 18 61574.0 19 61574.0 20 66908.0 21 72242.0 22 62377.5 23 52513.0 24 62673.5 25 72834.0 26 72834.0 27 87381.5 28 101929.0 29 117056.5 30 132184.0 31 150930.0 32 169676.0 33 169676.0 34 194083.5 35 218491.0 36 248440.5 37 278390.0 38 312278.5 39 346167.0 40 346167.0 41 381582.0 42 416997.0 43 452398.5 44 487800.0 45 527423.0 46 567046.0 47 567046.0 48 599818.0 49 632590.0 50 643909.5 51 655229.0 52 640569.5 53 625910.0 54 625910.0 55 587405.0 56 548900.0 57 506823.5 58 464747.0 59 423790.0 60 382833.0 61 382833.0 62 333970.0 63 285107.0 64 240263.0 65 195419.0 66 162118.0 67 128817.0 68 128817.0 69 104803.5 70 80790.0 71 66283.5 72 51777.0 73 41628.0 74 31479.0 75 31479.0 76 25261.0 77 19043.0 78 15123.5 79 11204.0 80 8812.0 81 6420.0 82 6420.0 83 5109.5 84 3799.0 85 2872.5 86 1946.0 87 1417.0 88 888.0 89 888.0 90 602.0 91 316.0 92 214.0 93 112.0 94 84.0 95 56.0 96 56.0 97 36.5 98 17.0 99 11.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7316270.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.61814787674068 #Duplication Level Percentage of deduplicated Percentage of total 1 79.4392783250874 40.21069137480835 2 10.257784233131417 10.384600784006901 3 3.5311638205689095 5.36222917339661 4 1.8191553325051721 3.6832909452603264 5 1.070507202026655 2.7093545927650564 6 0.7140228383985189 2.1685508172855803 7 0.5156858440123924 1.8272143617112773 8 0.36627937161921953 1.4832306717457047 9 0.29833092344803097 1.359086291936733 >10 1.776996372612474 16.906704496805926 >50 0.14447198077016243 5.028481305178072 >100 0.06311628103898201 5.647487796818741 >500 0.002210257234574351 0.7501778922417391 >1k 8.085547706379384E-4 0.6185789101270036 >5k 8.085547523440302E-5 0.2423865582046167 >10k+ 1.0780730031253735E-4 1.6179340277073517 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 57660 0.7881065078243422 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23647 0.3232111444766254 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22399 0.3061532720908332 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14889 0.2035053381026124 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3668166975795043E-5 0.0 0.0 0.0 1.3668166975795043E-5 2 1.3668166975795043E-5 1.3668166975795043E-5 0.0 0.0 1.3668166975795043E-5 3 1.3668166975795043E-5 1.3668166975795043E-5 0.0 0.0 1.3668166975795043E-5 4 1.3668166975795043E-5 1.3668166975795043E-5 0.0 0.0 1.3668166975795043E-5 5 1.3668166975795043E-5 1.3668166975795043E-5 0.0 0.0 1.3668166975795043E-5 6 1.3668166975795043E-5 1.3668166975795043E-5 0.0 0.0 4.100450092738513E-5 7 1.3668166975795043E-5 1.3668166975795043E-5 0.0 1.3668166975795043E-5 4.100450092738513E-5 8 1.3668166975795043E-5 1.3668166975795043E-5 0.0 1.3668166975795043E-5 5.467266790318017E-5 9 1.3668166975795043E-5 1.3668166975795043E-5 0.0 2.7336333951590086E-5 5.467266790318017E-5 10 2.7336333951590086E-5 1.3668166975795043E-5 0.0 2.7336333951590086E-5 5.467266790318017E-5 11 4.100450092738513E-5 1.3668166975795043E-5 0.0 1.230135027821554E-4 5.467266790318017E-5 12 4.100450092738513E-5 1.3668166975795043E-5 0.0 1.913543376611306E-4 5.467266790318017E-5 13 4.100450092738513E-5 1.3668166975795043E-5 0.0 2.0502250463692563E-4 5.467266790318017E-5 14 4.100450092738513E-5 1.3668166975795043E-5 0.0 2.870315064916959E-4 9.56771688305653E-5 15 5.467266790318017E-5 1.3668166975795043E-5 0.0 4.1004500927385127E-4 1.7768617068533555E-4 16 6.834083487897521E-5 1.3668166975795043E-5 0.0 6.560720148381621E-4 2.0502250463692563E-4 17 6.834083487897521E-5 1.3668166975795043E-5 0.0 9.841080222572432E-4 2.0502250463692563E-4 18 8.200900185477026E-5 1.3668166975795043E-5 0.0 0.0010251125231846283 2.3235883858851574E-4 19 9.56771688305653E-5 1.3668166975795043E-5 1.3668166975795043E-5 0.0014351575324584795 2.3235883858851574E-4 20 9.56771688305653E-5 1.3668166975795043E-5 1.3668166975795043E-5 0.002227911217054592 2.3235883858851574E-4 21 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.003813418586246817 2.7336333951590084E-4 22 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.005822639131688689 2.7336333951590084E-4 23 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.007148451328340808 3.2803600741908106E-4 24 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.010292129732773667 3.2803600741908106E-4 25 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.012520040949828259 3.2803600741908106E-4 26 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.015609046686357939 3.2803600741908106E-4 27 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.030534685023926127 3.4170417439487606E-4 28 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.12377892013279991 3.4170417439487606E-4 29 1.0934533580636034E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.2892047450408473 3.4170417439487606E-4 30 1.230135027821554E-4 1.3668166975795043E-5 1.3668166975795043E-5 0.4888556600562855 3.4170417439487606E-4 31 1.230135027821554E-4 1.3668166975795043E-5 1.3668166975795043E-5 1.1020506350913786 3.4170417439487606E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 9135 0.0 18.145596 37 TAGATCG 205 0.0 17.146341 5 CGTTACG 885 0.0 17.141243 24 TCGTTAC 1125 0.0 16.937777 23 AACGCAG 23910 0.0 16.016312 5 ACGGATG 2590 0.0 15.857142 28 TACGGAT 2540 0.0 15.732284 27 CTCGTTA 1420 0.0 15.242958 22 GTTACGG 1895 0.0 14.936675 25 TTACGGA 2765 0.0 14.853526 26 CGGATGG 2905 0.0 14.64716 29 ACGCAGA 26855 0.0 14.315024 6 CGCAGAG 27175 0.0 14.153266 7 CATTACG 1410 0.0 13.907802 24 TACTTAC 2260 0.0 13.834071 31 GGAGTGT 3090 0.0 13.830098 6 ATCTCGT 1745 0.0 13.676218 20 TATACAC 3425 0.0 13.665693 37 GTATAAG 1030 0.0 13.650486 1 ATTACGG 1405 0.0 13.562278 25 >>END_MODULE