##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727390.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4182122 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30315710541204 33.0 31.0 34.0 30.0 34.0 2 32.44573855090789 34.0 31.0 34.0 31.0 34.0 3 32.53376204711388 34.0 31.0 34.0 31.0 34.0 4 36.07614388102499 37.0 35.0 37.0 35.0 37.0 5 35.884137048130114 37.0 35.0 37.0 35.0 37.0 6 35.89966481130871 37.0 35.0 37.0 35.0 37.0 7 35.863184287785 37.0 35.0 37.0 35.0 37.0 8 35.81942468440663 37.0 35.0 37.0 35.0 37.0 9 37.65271720911059 39.0 37.0 39.0 35.0 39.0 10 37.482095213865115 39.0 37.0 39.0 35.0 39.0 11 37.58937831081924 39.0 37.0 39.0 35.0 39.0 12 37.51157976740038 39.0 37.0 39.0 35.0 39.0 13 37.59552519032204 39.0 37.0 39.0 35.0 39.0 14 38.80362050652755 40.0 38.0 41.0 35.0 41.0 15 38.73003489616037 40.0 38.0 41.0 35.0 41.0 16 38.70065053099838 40.0 38.0 41.0 35.0 41.0 17 38.6458305137918 40.0 38.0 41.0 34.0 41.0 18 38.618585254088714 40.0 38.0 41.0 34.0 41.0 19 38.66970762689372 40.0 38.0 41.0 34.0 41.0 20 38.62999907702358 40.0 38.0 41.0 34.0 41.0 21 38.587084738321835 40.0 38.0 41.0 34.0 41.0 22 38.54328424660974 40.0 38.0 41.0 34.0 41.0 23 38.47279658508288 40.0 38.0 41.0 34.0 41.0 24 38.4287139399568 40.0 38.0 41.0 34.0 41.0 25 38.31012844675502 40.0 38.0 41.0 34.0 41.0 26 38.1933855588144 40.0 38.0 41.0 34.0 41.0 27 38.08928673051623 40.0 38.0 41.0 33.0 41.0 28 37.99407406096714 40.0 37.0 41.0 33.0 41.0 29 37.89763689342396 40.0 37.0 41.0 33.0 41.0 30 37.81860117901869 40.0 37.0 41.0 33.0 41.0 31 37.70522165541799 40.0 37.0 41.0 33.0 41.0 32 37.59686948396053 40.0 37.0 41.0 33.0 41.0 33 37.48303516731458 40.0 36.0 41.0 32.0 41.0 34 37.376330963085245 40.0 36.0 41.0 32.0 41.0 35 37.28740314127613 39.0 36.0 41.0 32.0 41.0 36 37.18364337530086 39.0 36.0 41.0 31.0 41.0 37 37.08116836381148 39.0 36.0 41.0 31.0 41.0 38 36.971057994004 39.0 36.0 41.0 31.0 41.0 39 36.844755604929745 39.0 36.0 41.0 31.0 41.0 40 36.70982386453576 39.0 35.0 41.0 30.0 41.0 41 36.57632919364858 39.0 35.0 41.0 30.0 41.0 42 36.43805871756013 39.0 35.0 40.0 30.0 41.0 43 34.7466977290476 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 18.0 11 25.0 12 14.0 13 13.0 14 15.0 15 18.0 16 27.0 17 59.0 18 116.0 19 267.0 20 555.0 21 1042.0 22 2024.0 23 3615.0 24 6195.0 25 10045.0 26 15580.0 27 23028.0 28 33309.0 29 46586.0 30 61948.0 31 80006.0 32 102411.0 33 132914.0 34 178864.0 35 244942.0 36 362747.0 37 606288.0 38 1122959.0 39 1146489.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.10892365167731 17.5726341794907 12.719595458956004 25.59884670987599 2 16.86079459183639 21.177885293638017 36.70105750143109 25.260262613094504 3 18.33090952392111 22.59259772909542 31.157101586228237 27.919391160755236 4 13.318119366197351 15.150227563901769 35.377710167230894 36.15394290266998 5 14.284470897788252 37.36863726117985 34.61195058393801 13.734941257093885 6 34.661638278366816 36.3565194893884 14.913816478811473 14.068025753433306 7 29.34751783903004 31.16857901323778 21.264587690172597 18.219315457559585 8 27.588817351574153 36.060856187361345 19.195566269946212 17.15476019111829 9 26.65398092164695 13.626551305772525 18.82006311628403 40.8994046562965 10 15.040044264610167 27.80239313917671 34.26970805729723 22.88785453891589 11 36.51646221702762 21.295170250891772 22.004212215712503 20.184155316368102 12 20.967824468057124 25.57338116869857 31.400829531037118 22.05796483220719 13 31.608427492072206 19.13093400909873 24.933060298097473 24.32757820073159 14 21.447270070074474 19.657174037486232 27.768821665173803 31.12673422726549 15 24.77742160558683 28.41060112545736 22.72879652960865 24.083180739347153 16 23.783309047416598 26.420223991552618 24.98281972644509 24.813647234585694 17 23.640773750741847 26.770261604037376 26.428306013071833 23.16065863214894 18 23.578006571783416 25.735643293045968 27.07455688762786 23.611793247542753 19 24.620396057312533 25.791810951473913 27.176753810625325 22.411039180588226 20 23.851241068529326 25.80324055587092 27.04471557740305 23.300802798196703 21 23.518395685252607 26.1199218961092 27.2822744051943 23.079408013443892 22 23.971921431273408 25.557838819623147 26.7359488795401 23.734290869563345 23 23.17127525213277 25.670676273910708 27.116951633644355 24.041096840312168 24 23.316440792497207 25.67698885876596 27.31225918325673 23.69431116548011 25 23.71353585572109 25.463221780713237 27.04485904524067 23.778383318325 26 23.31194546691847 25.85553458268314 27.410630297251014 23.421889653147375 27 23.73749498460351 26.221114544243328 26.891468015519393 23.149922455633767 28 23.36120275783442 26.296626449443604 26.944216357150747 23.397954435571226 29 23.25489309015854 26.44114638453876 27.152794681742904 23.151165843559802 30 23.414429325591172 26.339762445954467 26.969777543553246 23.276030684901112 31 23.322203417308245 25.67050889476682 27.23493001877994 23.772357669144995 32 22.75701187100711 26.245504076638603 27.298055867332423 23.699428185021862 33 23.186578488145493 25.661111751402753 27.258697857212198 23.89361190323955 34 23.292792510596293 25.687151163930654 27.714949492147767 23.305106833325283 35 23.21639588706403 25.738440915879547 27.409817312837838 23.635345884218587 36 22.980319560261513 25.50791201213164 27.773890862103016 23.73787756550383 37 22.772171639182215 25.174636225342063 27.80150842084473 24.251683714630996 38 22.641711552173753 25.089105482814706 28.271939460398332 23.99724350461321 39 22.3254845267546 24.96318854399752 28.75975401961014 23.95157290963774 40 22.528921920498732 24.943963853756536 28.821445189786427 23.7056690359583 41 22.037711955796603 24.808243279368703 29.128705475354376 24.025339289480314 42 21.62043575008094 25.055438363586713 29.01393120525896 24.310194681073387 43 21.323624705352927 24.45210828378512 28.964817382180623 25.259449628681324 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 629.0 1 806.5 2 984.0 3 4272.5 4 7561.0 5 7561.0 6 9723.0 7 11885.0 8 10781.0 9 9677.0 10 12827.0 11 15977.0 12 15977.0 13 25043.0 14 34109.0 15 53337.0 16 72565.0 17 56973.0 18 41381.0 19 41381.0 20 44165.5 21 46950.0 22 38197.0 23 29444.0 24 35216.5 25 40989.0 26 40989.0 27 49449.5 28 57910.0 29 65823.0 30 73736.0 31 83518.5 32 93301.0 33 93301.0 34 107191.5 35 121082.0 36 139020.0 37 156958.0 38 176783.5 39 196609.0 40 196609.0 41 216420.5 42 236232.0 43 257719.0 44 279206.0 45 298896.0 46 318586.0 47 318586.0 48 336420.5 49 354255.0 50 359020.5 51 363786.0 52 357705.5 53 351625.0 54 351625.0 55 332817.5 56 314010.0 57 290970.0 58 267930.0 59 241729.5 60 215529.0 61 215529.0 62 188669.5 63 161810.0 64 137161.5 65 112513.0 66 93197.5 67 73882.0 68 73882.0 69 59954.5 70 46027.0 71 38155.5 72 30284.0 73 24610.5 74 18937.0 75 18937.0 76 15097.0 77 11257.0 78 9056.5 79 6856.0 80 5237.0 81 3618.0 82 3618.0 83 2837.5 84 2057.0 85 1606.0 86 1155.0 87 840.5 88 526.0 89 526.0 90 357.5 91 189.0 92 122.5 93 56.0 94 44.5 95 33.0 96 33.0 97 22.0 98 11.0 99 8.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4182122.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.29949767536589 #Duplication Level Percentage of deduplicated Percentage of total 1 80.99869008100406 43.171894936801586 2 9.705721865685776 10.34620200035734 3 3.284843302806939 5.25241493945699 4 1.6037072503608685 3.419071634503062 5 0.9130586761465085 2.4332784393371742 6 0.6369077790439717 2.036811881314597 7 0.4564033251783796 1.7028247578562015 8 0.3350386908814146 1.4285915140633272 9 0.2592278332636197 1.2435041966781994 >10 1.6284852188983518 16.39055078760017 >50 0.12254467774909239 4.462212471210602 >100 0.05313070913994158 4.887858006863906 >500 0.0015236011388269995 0.539979936890815 >1k 5.377415267159217E-4 0.6726341919291671 >5k 0.0 0.0 >10k+ 1.7924717557196915E-4 2.0121703051368494 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 41725 0.9976992541107121 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16555 0.39585167529785115 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15067 0.36027165156827085 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10899 0.26060932703541406 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4794 0.11463080225780119 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 4459 0.10662051465739164 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.391130626987926E-5 2.391130626987926E-5 2 0.0 0.0 0.0 2.391130626987926E-5 2.391130626987926E-5 3 0.0 0.0 0.0 2.391130626987926E-5 2.391130626987926E-5 4 0.0 0.0 0.0 4.782261253975852E-5 2.391130626987926E-5 5 0.0 0.0 0.0 7.173391880963779E-5 2.391130626987926E-5 6 0.0 0.0 0.0 7.173391880963779E-5 7.173391880963779E-5 7 0.0 0.0 0.0 7.173391880963779E-5 7.173391880963779E-5 8 2.391130626987926E-5 0.0 0.0 7.173391880963779E-5 7.173391880963779E-5 9 2.391130626987926E-5 0.0 0.0 7.173391880963779E-5 1.1955653134939632E-4 10 2.391130626987926E-5 0.0 0.0 7.173391880963779E-5 1.1955653134939632E-4 11 2.391130626987926E-5 0.0 0.0 2.1520175642891336E-4 1.1955653134939632E-4 12 2.391130626987926E-5 0.0 0.0 2.8693567523855115E-4 1.1955653134939632E-4 13 2.391130626987926E-5 0.0 0.0 2.8693567523855115E-4 1.4346783761927558E-4 14 4.782261253975852E-5 0.0 0.0 4.064922065879475E-4 2.3911306269879264E-4 15 4.782261253975852E-5 2.391130626987926E-5 0.0 5.260487379373438E-4 2.630243689686719E-4 16 4.782261253975852E-5 2.391130626987926E-5 0.0 9.564522507951705E-4 3.347582877783097E-4 17 4.782261253975852E-5 2.391130626987926E-5 0.0 0.0012194766197638424 3.5866959404818894E-4 18 4.782261253975852E-5 2.391130626987926E-5 0.0 0.0013151218448433594 4.064922065879475E-4 19 4.782261253975852E-5 2.391130626987926E-5 0.0 0.0019607271141300997 4.064922065879475E-4 20 4.782261253975852E-5 2.391130626987926E-5 0.0 0.0031084698150843043 4.064922065879475E-4 21 4.782261253975852E-5 2.391130626987926E-5 0.0 0.004614882110086697 4.3040351285782673E-4 22 4.782261253975852E-5 2.391130626987926E-5 0.0 0.007699440618901122 4.3040351285782673E-4 23 4.782261253975852E-5 2.391130626987926E-5 0.0 0.009253675526443274 6.456052692867401E-4 24 4.782261253975852E-5 2.391130626987926E-5 0.0 0.012290411422717942 6.934278818264986E-4 25 4.782261253975852E-5 2.391130626987926E-5 0.0 0.014514162905816712 6.934278818264986E-4 26 4.782261253975852E-5 2.391130626987926E-5 0.0 0.018076947540028723 6.934278818264986E-4 27 4.782261253975852E-5 2.391130626987926E-5 0.0 0.034121434047117705 7.412504943662572E-4 28 4.782261253975852E-5 2.391130626987926E-5 0.0 0.14645675090301047 7.412504943662572E-4 29 4.782261253975852E-5 2.391130626987926E-5 0.0 0.3472878122637264 7.412504943662572E-4 30 4.782261253975852E-5 2.391130626987926E-5 0.0 0.5912787814415744 7.412504943662572E-4 31 4.782261253975852E-5 2.391130626987926E-5 0.0 1.1797599400495729 7.412504943662572E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 5320 0.0 16.8656 37 AACGCAG 14780 0.0 15.658661 5 TATACAC 2020 0.0 15.386138 37 TAGATCG 125 2.9630828E-6 14.799999 5 GTATAGA 485 0.0 14.494845 1 CGCAATC 230 1.8189894E-12 14.478261 22 TATACGA 105 1.6572804E-4 14.095238 2 ACGCAGA 16730 0.0 13.977286 6 CTAATAC 465 0.0 13.924731 3 CGCAGAG 16900 0.0 13.869527 7 TCGTTAC 445 0.0 13.30337 23 TATACAG 640 0.0 13.296875 5 TAGTACT 505 0.0 13.188118 4 AGAGTAC 17820 0.0 13.153481 10 CGAACCG 155 1.890714E-6 13.129032 18 TAAGAGT 635 0.0 13.110236 4 TAATACG 170 3.7381506E-7 13.058823 4 CAGAGTA 18080 0.0 13.035952 9 AACGGTA 185 7.3983756E-8 13.0 18 TATACTG 675 0.0 12.881481 5 >>END_MODULE