##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727388.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2842289 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.922326336273336 31.0 31.0 34.0 30.0 34.0 2 32.08480136960035 33.0 31.0 34.0 30.0 34.0 3 32.1590823452506 34.0 31.0 34.0 30.0 34.0 4 35.80964532459578 37.0 35.0 37.0 35.0 37.0 5 35.49780652143396 37.0 35.0 37.0 33.0 37.0 6 35.50403460028168 37.0 35.0 37.0 33.0 37.0 7 35.47989912355851 37.0 35.0 37.0 33.0 37.0 8 35.41715708712238 37.0 35.0 37.0 33.0 37.0 9 37.20710561100578 39.0 37.0 39.0 34.0 39.0 10 36.94862626566123 39.0 37.0 39.0 33.0 39.0 11 37.0878629864873 39.0 37.0 39.0 33.0 39.0 12 36.984714784457175 39.0 37.0 39.0 33.0 39.0 13 37.097135794424844 39.0 37.0 39.0 33.0 39.0 14 38.18688177029148 40.0 38.0 41.0 33.0 41.0 15 38.08108922069501 40.0 37.0 41.0 33.0 41.0 16 38.046835138861674 40.0 37.0 41.0 33.0 41.0 17 37.9745339055951 40.0 37.0 41.0 33.0 41.0 18 37.932275711583166 40.0 37.0 41.0 33.0 41.0 19 37.982879292007254 40.0 37.0 41.0 33.0 41.0 20 37.93241609139676 40.0 37.0 41.0 33.0 41.0 21 37.87821998396363 40.0 37.0 41.0 33.0 41.0 22 37.81968617547336 39.0 37.0 41.0 33.0 41.0 23 37.75310603531168 39.0 37.0 41.0 33.0 41.0 24 37.68453665338043 39.0 37.0 41.0 32.0 41.0 25 37.56867897669801 39.0 37.0 41.0 32.0 41.0 26 37.419777158480365 39.0 37.0 40.0 32.0 41.0 27 37.30540701526129 39.0 36.0 40.0 32.0 41.0 28 37.19419489010442 39.0 36.0 40.0 31.0 41.0 29 37.095802713939364 39.0 36.0 40.0 31.0 41.0 30 37.007739184861215 39.0 36.0 40.0 31.0 41.0 31 36.89608023673877 39.0 36.0 40.0 31.0 41.0 32 36.78291475638121 39.0 35.0 40.0 30.0 41.0 33 36.674299481861276 39.0 35.0 40.0 30.0 41.0 34 36.55326675084764 39.0 35.0 40.0 30.0 41.0 35 36.471274033006495 38.0 35.0 40.0 30.0 41.0 36 36.37523946368578 38.0 35.0 40.0 30.0 41.0 37 36.27760723839131 38.0 35.0 40.0 30.0 41.0 38 36.159286054303415 38.0 35.0 40.0 30.0 41.0 39 36.029794296076155 38.0 35.0 40.0 29.0 41.0 40 35.89729369532795 38.0 35.0 40.0 29.0 41.0 41 35.76858651600875 38.0 35.0 40.0 28.0 41.0 42 35.64188722540178 38.0 35.0 40.0 27.0 41.0 43 33.941185431882545 37.0 32.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 2.0 10 11.0 11 10.0 12 7.0 13 6.0 14 10.0 15 15.0 16 33.0 17 68.0 18 141.0 19 288.0 20 622.0 21 1189.0 22 2302.0 23 4050.0 24 6505.0 25 10485.0 26 15234.0 27 22170.0 28 31385.0 29 42829.0 30 56673.0 31 72214.0 32 92713.0 33 119300.0 34 158711.0 35 217300.0 36 318374.0 37 501801.0 38 767492.0 39 400345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.96720002786486 18.636985894115625 13.122346109069133 25.273467968950374 2 17.046120222116752 21.772697990950252 36.437181440733156 24.74400034619984 3 18.38022101200828 22.819284034804344 31.67506893211774 27.125426021069636 4 13.304488037634457 15.82879151275609 36.02367669156796 34.84304375804149 5 13.85724674725195 37.89899619637553 34.853880094529444 13.389876961843077 6 33.86657725516301 37.36404003955967 15.059693085397017 13.709689619880313 7 28.78961287891555 31.692941850740723 21.350678977401667 18.166766292942064 8 27.509764137285124 36.14653541564563 19.326817223723555 17.01688322334569 9 26.4880172283677 13.475160337319675 19.024877484309304 41.011944950003326 10 14.674088384397225 28.37902831133639 34.85532259386713 22.091560710399257 11 36.544383769560376 21.358384034839524 22.354201138589357 19.74303105701074 12 20.783389725675327 26.058785718130707 31.687734779960795 21.47008977623317 13 31.48244249617122 19.58467277606183 25.062124224524666 23.87076050324228 14 21.12853407939868 20.10393735471657 28.18020968311104 30.587318882773708 15 24.412858790925203 28.83436554129436 23.011101263805333 23.741674403975104 16 23.405818338669995 26.821375307014872 25.371557923912736 24.401248430402397 17 23.399555780569813 27.00115998056496 26.811207445829755 22.788076793035472 18 23.383125361284517 26.074442113381153 27.33082385359124 23.211608671743093 19 24.366346983012637 26.0747939424879 27.53896595314551 22.019893121353952 20 23.740724465386876 26.103855026705585 27.339689947081386 22.81573056082615 21 23.45697429079168 26.25049739839967 27.47690329871452 22.815625012094127 22 23.7833309702145 25.921326086122843 27.18615172489497 23.10919121876769 23 23.157356623481988 25.95320180319454 27.29761118591389 23.591830387409583 24 23.16354881576082 26.081302780962805 27.46951488747274 23.285633515803635 25 23.53163242724438 25.63564085144051 27.433522769852047 23.39920395146306 26 23.151269979935186 26.041229445703795 27.63906133401635 23.168439240344664 27 23.50345091579357 26.400587695339915 27.1552259464115 22.940735442455008 28 23.15035522425763 26.365439967575426 27.323259527796083 23.160945280370857 29 23.078019159909495 26.666535317133476 27.328290684022633 22.927154838934392 30 23.085724217347355 26.642470206231668 27.264679981521933 23.00712559489904 31 23.203235139002405 25.92255748799647 27.37251560274131 23.501691770259818 32 22.612901080783836 26.42268256324392 27.472012874130673 23.492403481841574 33 23.027637231822663 25.829709786724713 27.5149008422437 23.627752139208926 34 23.104934086575994 25.800824617060403 28.066252235434185 23.027989060929414 35 23.010538337234532 25.897401706863725 27.782466877928318 23.309593077973425 36 22.780477284329635 25.627091404146444 28.092604235529883 23.49982707599403 37 22.63284979113665 25.26400376597876 28.01604622190073 24.087100220983864 38 22.340233523051314 25.101036523731402 28.627665941077773 23.93106401213951 39 22.311066890101607 24.929449468368627 29.003736073284596 23.755747568245173 40 22.293158788567947 24.932651113240066 29.166632949710603 23.60755714848138 41 21.869873190235054 24.710506215237086 29.628408652322126 23.791211942205738 42 21.419637482324987 25.018004854538017 29.428569719687196 24.133787943449807 43 21.140285171564184 24.3906231913785 29.49450249429245 24.974589142764863 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1143.0 1 1084.0 2 1025.0 3 2870.5 4 4716.0 5 4716.0 6 5849.0 7 6982.0 8 6431.5 9 5881.0 10 7866.0 11 9851.0 12 9851.0 13 15315.5 14 20780.0 15 33591.5 16 46403.0 17 36632.0 18 26861.0 19 26861.0 20 29247.5 21 31634.0 22 27304.5 23 22975.0 24 27390.0 25 31805.0 26 31805.0 27 37997.0 28 44189.0 29 50210.0 30 56231.0 31 64263.5 32 72296.0 33 72296.0 34 82212.5 35 92129.0 36 104108.0 37 116087.0 38 129663.5 39 143240.0 40 143240.0 41 157200.0 42 171160.0 43 184441.5 44 197723.0 45 208653.0 46 219583.0 47 219583.0 48 230543.0 49 241503.0 50 244041.5 51 246580.0 52 238937.0 53 231294.0 54 231294.0 55 218200.0 56 205106.0 57 188736.0 58 172366.0 59 155640.0 60 138914.0 61 138914.0 62 120237.5 63 101561.0 64 85283.5 65 69006.0 66 56498.5 67 43991.0 68 43991.0 69 35529.0 70 27067.0 71 21917.0 72 16767.0 73 13591.0 74 10415.0 75 10415.0 76 8324.0 77 6233.0 78 5064.0 79 3895.0 80 3034.5 81 2174.0 82 2174.0 83 1766.0 84 1358.0 85 1056.0 86 754.0 87 573.5 88 393.0 89 393.0 90 269.5 91 146.0 92 92.5 93 39.0 94 30.5 95 22.0 96 22.0 97 15.5 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2842289.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.259964654831556 #Duplication Level Percentage of deduplicated Percentage of total 1 83.55889012822864 52.02373545980469 2 8.97283798344314 11.172971514054002 3 2.7877694072027275 5.206992742747876 4 1.3554590065847676 3.375633193641629 5 0.7839327689842462 2.4403813244361703 6 0.5134053131461359 1.917875799004869 7 0.3595292198711762 1.5668993565091014 8 0.2619809316793325 1.3048738837276066 9 0.20503639007807944 1.1489002559293935 >10 1.1167753644693144 12.491038125735363 >50 0.06112155220632969 2.5506051349771504 >100 0.02207665541066078 2.2453312674904335 >500 6.773021117178999E-4 0.27100485689452664 >1k 2.8220921311946533E-4 0.3787812955996203 >5k 1.1288368524778612E-4 0.5826323296262831 >10k+ 1.1288368524778612E-4 1.3223434598212926 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27186 0.9564826096149969 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10444 0.36745031909140835 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9606 0.3379670399456213 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6974 0.24536561904859078 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.518291067516357E-5 2 0.0 0.0 0.0 0.0 3.518291067516357E-5 3 0.0 0.0 0.0 0.0 3.518291067516357E-5 4 0.0 0.0 0.0 0.0 3.518291067516357E-5 5 0.0 0.0 0.0 0.0 3.518291067516357E-5 6 1.0554873202549072E-4 0.0 0.0 3.518291067516357E-5 7.036582135032714E-5 7 1.0554873202549072E-4 0.0 0.0 3.518291067516357E-5 7.036582135032714E-5 8 1.0554873202549072E-4 0.0 0.0 3.518291067516357E-5 7.036582135032714E-5 9 1.0554873202549072E-4 0.0 0.0 1.0554873202549072E-4 7.036582135032714E-5 10 1.0554873202549072E-4 0.0 0.0 1.4073164270065428E-4 7.036582135032714E-5 11 1.4073164270065428E-4 0.0 0.0 3.5182910675163575E-4 7.036582135032714E-5 12 1.4073164270065428E-4 0.0 0.0 4.9256074945229E-4 7.036582135032714E-5 13 1.4073164270065428E-4 0.0 0.0 4.9256074945229E-4 7.036582135032714E-5 14 1.4073164270065428E-4 0.0 0.0 5.277436601274536E-4 1.4073164270065428E-4 15 1.4073164270065428E-4 0.0 0.0 7.036582135032715E-4 1.4073164270065428E-4 16 1.4073164270065428E-4 0.0 0.0 8.443898562039258E-4 2.1109746405098144E-4 17 1.7591455337581788E-4 0.0 0.0 0.0013721335163313793 2.1109746405098144E-4 18 1.7591455337581788E-4 0.0 0.0 0.0014424993376817065 2.1109746405098144E-4 19 1.7591455337581788E-4 0.0 0.0 0.0016887797124078515 2.1109746405098144E-4 20 2.46280374726145E-4 0.0 0.0 0.002146157551184978 2.1109746405098144E-4 21 2.46280374726145E-4 0.0 0.0 0.003377559424815703 2.1109746405098144E-4 22 2.46280374726145E-4 0.0 0.0 0.0053478024226248635 2.1109746405098144E-4 23 2.46280374726145E-4 0.0 0.0 0.00679030176030657 3.166461960764722E-4 24 2.46280374726145E-4 0.0 0.0 0.008901276400816385 3.166461960764722E-4 25 2.46280374726145E-4 0.0 0.0 0.0098512149890458 3.166461960764722E-4 26 2.8146328540130857E-4 0.0 0.0 0.011469628880103324 3.166461960764722E-4 27 2.8146328540130857E-4 0.0 0.0 0.024557671651264174 3.166461960764722E-4 28 2.8146328540130857E-4 0.0 0.0 0.12686957589463985 3.166461960764722E-4 29 2.8146328540130857E-4 0.0 0.0 0.3004972400765721 3.166461960764722E-4 30 2.8146328540130857E-4 0.0 0.0 0.5073375719358587 3.166461960764722E-4 31 2.8146328540130857E-4 0.0 0.0 1.0711788984160302 3.166461960764722E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTCG 125 8.592906E-9 17.76 5 AACGCAG 10055 0.0 17.221283 5 TACATCG 130 1.3955287E-8 17.076923 5 CTTATAC 3395 0.0 16.402061 37 ACCGTGA 420 0.0 15.416666 8 GACCGTG 445 0.0 15.382023 7 ACGCAGA 11305 0.0 15.349846 6 CGCAGAG 11445 0.0 15.194408 7 GTATTAG 380 0.0 15.092106 1 CGCGTGA 125 2.9622752E-6 14.799999 10 CGAACCG 90 8.279299E-4 14.388889 18 GGTATCA 5800 0.0 14.385345 1 AGAGTAC 12030 0.0 14.317124 10 GCAGAGT 12390 0.0 14.095239 8 CAGAGTA 12285 0.0 14.095239 9 GTACTAC 290 0.0 14.034483 1 TATACTG 500 0.0 13.69 5 GTACCGT 205 1.4260877E-9 13.536585 6 CAACGCA 12955 0.0 13.480509 4 TCAACGC 12985 0.0 13.4778595 3 >>END_MODULE