##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727387.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3900399 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33704244104257 33.0 31.0 34.0 31.0 34.0 2 32.48673225482829 34.0 31.0 34.0 31.0 34.0 3 32.58016218340739 34.0 31.0 34.0 31.0 34.0 4 36.11487747791956 37.0 35.0 37.0 35.0 37.0 5 35.923640889047505 37.0 35.0 37.0 35.0 37.0 6 35.93529123558898 37.0 35.0 37.0 35.0 37.0 7 35.90414288384342 37.0 35.0 37.0 35.0 37.0 8 35.85625829562565 37.0 35.0 37.0 35.0 37.0 9 37.69348392305505 39.0 37.0 39.0 35.0 39.0 10 37.514607864477455 39.0 37.0 39.0 35.0 39.0 11 37.629644044109334 39.0 37.0 39.0 35.0 39.0 12 37.5468204663164 39.0 37.0 39.0 35.0 39.0 13 37.62862132822821 39.0 37.0 39.0 35.0 39.0 14 38.87132213909398 40.0 38.0 41.0 36.0 41.0 15 38.79849369256838 40.0 38.0 41.0 35.0 41.0 16 38.77144005010769 40.0 38.0 41.0 35.0 41.0 17 38.709567918564225 40.0 38.0 41.0 35.0 41.0 18 38.672255838441146 40.0 38.0 41.0 35.0 41.0 19 38.72410309817021 40.0 38.0 41.0 35.0 41.0 20 38.68692946542136 40.0 38.0 41.0 34.0 41.0 21 38.649211785768586 40.0 38.0 41.0 34.0 41.0 22 38.612098403265925 40.0 38.0 41.0 34.0 41.0 23 38.55459069700305 40.0 38.0 41.0 34.0 41.0 24 38.50956402152703 40.0 38.0 41.0 34.0 41.0 25 38.4036581898416 40.0 38.0 41.0 34.0 41.0 26 38.30506904550022 40.0 38.0 41.0 34.0 41.0 27 38.2201538868203 40.0 38.0 41.0 34.0 41.0 28 38.13488466179999 40.0 38.0 41.0 34.0 41.0 29 38.068895002793305 40.0 38.0 41.0 33.0 41.0 30 38.01374423488469 40.0 37.0 41.0 33.0 41.0 31 37.927713292922085 40.0 37.0 41.0 33.0 41.0 32 37.843297826709524 40.0 37.0 41.0 33.0 41.0 33 37.75622237622356 40.0 37.0 41.0 33.0 41.0 34 37.67636746907176 40.0 37.0 41.0 33.0 41.0 35 37.616426422014776 40.0 37.0 41.0 33.0 41.0 36 37.54405510820816 40.0 37.0 41.0 33.0 41.0 37 37.468343366922205 40.0 37.0 41.0 32.0 41.0 38 37.38473320293642 40.0 37.0 41.0 32.0 41.0 39 37.288903776254685 40.0 37.0 41.0 32.0 41.0 40 37.18466033859613 39.0 36.0 41.0 31.0 41.0 41 37.09060611491286 39.0 36.0 41.0 31.0 41.0 42 36.987702540176016 39.0 36.0 41.0 31.0 41.0 43 35.34224652400947 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 11.0 11 14.0 12 11.0 13 10.0 14 6.0 15 13.0 16 18.0 17 42.0 18 81.0 19 162.0 20 353.0 21 752.0 22 1486.0 23 2821.0 24 4771.0 25 7574.0 26 12076.0 27 18067.0 28 26599.0 29 36853.0 30 50655.0 31 66658.0 32 87931.0 33 116020.0 34 157012.0 35 217752.0 36 321438.0 37 537567.0 38 1070791.0 39 1162851.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.67609570200382 17.937857126924705 12.17480570577523 26.211241465296244 2 16.847225117225186 20.3992206951135 37.08669292551864 25.66686126214267 3 17.966982352318315 22.08830429912427 31.29082434899609 28.653888999561328 4 13.0756109823636 15.077970228174092 36.12304792407136 35.723370865390955 5 13.816586456924023 37.491446387920824 35.26595612397603 13.426011031179119 6 34.850742193298686 36.88186772686589 14.88101601913035 13.386374060705073 7 29.76890313016694 31.432963653205736 20.97998179160645 17.818151425020876 8 27.424783977228994 36.530031927502804 18.953035317668782 17.09214877759942 9 26.856713890040478 13.305125962754067 18.538872561499478 41.299287585705976 10 14.518335175452563 27.91019585432157 35.00413675626519 22.567332213960675 11 37.23877992995075 20.90063093545045 22.053154049111388 19.807435085487406 12 20.85291786814631 25.216830380686694 31.709166164794933 22.221085586372062 13 31.395839246189944 19.23480136262982 24.86350755397076 24.505851837209473 14 21.393119011670343 19.381094088066376 27.356329442192965 31.869457458070315 15 24.814640758548034 28.36512367068087 22.42455194968515 24.395683621085944 16 24.239084257790037 26.561641514111763 24.63776141876767 24.561512809330534 17 23.80984612087122 26.708447007601016 26.050616872786602 23.431089998741154 18 23.80661568213919 25.999827197166237 26.5839469244044 23.609610196290173 19 24.795411956571623 25.741725397837506 26.644171532194527 22.818691113396348 20 24.202062404384783 25.6459916023976 26.563692586322578 23.58825340689504 21 23.89091475000378 25.75831344434249 26.797719925576846 23.553051880076882 22 24.254800598605424 25.297104219337562 26.4007092607705 24.047385921286516 23 23.67483429259417 25.370942818926988 26.64491504587095 24.309307842607897 24 23.650067595648547 25.498852809674087 26.748955683764663 24.102123910912702 25 24.104328813539333 25.23734110279487 26.523568486198464 24.134761597467335 26 23.733546234628815 25.549565570086546 26.793053736297235 23.9238344589874 27 24.07640859306958 25.912041306543255 26.316743492140166 23.694806608247003 28 23.793488819989957 25.920399425802337 26.421809666139286 23.864302088068428 29 23.762184330372353 26.19473033399916 26.449422225777415 23.593663109851068 30 24.039668762093314 26.050950172020865 26.235674863007606 23.67370620287822 31 23.971829548720528 25.32043516573561 26.60566265143643 24.102072634107433 32 23.338637918838558 26.027593587220178 26.57348645612923 24.060282037812026 33 23.629505596735104 25.413476928898817 26.676424642709627 24.280592831656453 34 23.88317195240795 25.38417223468676 27.137274930077666 23.59538088282763 35 23.77556757654794 25.565179357291395 26.752570698536225 23.90668236762444 36 23.596842271777835 25.268594315607196 27.097663598006257 24.036899814608713 37 23.53746373127467 24.956344209912885 27.054642358384363 24.451549700428085 38 23.32610073994994 24.930013570406516 27.395992051069644 24.3478936385739 39 23.186832936835437 24.71583035479191 27.84468973558859 24.252646972784067 40 23.366224840074054 24.607892679697642 28.018312998234286 24.00756948199402 41 22.852585081680104 24.471957868925717 28.39468474891928 24.2807723004749 42 22.46377870571703 24.673860289678057 28.386608652089183 24.47575235251573 43 22.268670461663024 24.068896541097462 28.379840113793485 25.282592883446025 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 640.0 1 683.5 2 727.0 3 2471.0 4 4215.0 5 4215.0 6 5184.5 7 6154.0 8 5486.5 9 4819.0 10 6545.5 11 8272.0 12 8272.0 13 12893.0 14 17514.0 15 29045.0 16 40576.0 17 32811.0 18 25046.0 19 25046.0 20 28468.5 21 31891.0 22 28963.0 23 26035.0 24 31850.0 25 37665.0 26 37665.0 27 46118.0 28 54571.0 29 62842.5 30 71114.0 31 81972.5 32 92831.0 33 92831.0 34 107067.5 35 121304.0 36 138470.5 37 155637.0 38 175419.5 39 195202.0 40 195202.0 41 213920.5 42 232639.0 43 251652.5 44 270666.0 45 288542.5 46 306419.0 47 306419.0 48 322294.5 49 338170.0 50 341939.5 51 345709.0 52 338610.0 53 331511.0 54 331511.0 55 314855.5 56 298200.0 57 276482.5 58 254765.0 59 230432.0 60 206099.0 61 206099.0 62 178554.5 63 151010.0 64 126225.0 65 101440.0 66 84256.5 67 67073.0 68 67073.0 69 53874.0 70 40675.0 71 33199.5 72 25724.0 73 20607.0 74 15490.0 75 15490.0 76 12364.0 77 9238.0 78 7270.0 79 5302.0 80 4024.5 81 2747.0 82 2747.0 83 2262.0 84 1777.0 85 1350.0 86 923.0 87 665.5 88 408.0 89 408.0 90 269.0 91 130.0 92 80.5 93 31.0 94 32.0 95 33.0 96 33.0 97 19.5 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3900399.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.57495856768961 #Duplication Level Percentage of deduplicated Percentage of total 1 80.9801158409223 45.00466582665962 2 9.857917004699383 10.957066581997822 3 3.2497175152842153 5.418087488058465 4 1.6235458685652366 3.609139775130267 5 0.9441448151238515 2.623540449120351 6 0.6028548856005564 2.010218117374811 7 0.4412325756873554 1.7165037478777827 8 0.33476356316912553 1.4883576922477038 9 0.26017760880025637 1.3013423846383323 >10 1.5537405166068263 16.19357557683685 >50 0.1094488806935518 4.138328402761796 >100 0.041463962328643855 3.8446344177027227 >500 5.077151577674495E-4 0.17458162524394452 >1k 1.8462368045582176E-4 0.2258069280232661 >5k 9.231184022791088E-5 0.3992855437476042 >10k+ 9.231184022791088E-5 0.894865442578628 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24497 0.6280639493549249 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10389 0.2663573649772754 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9310 0.23869352853387563 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6256 0.16039384688592115 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.1276805270435154E-5 2 0.0 0.0 0.0 0.0 5.1276805270435154E-5 3 0.0 0.0 0.0 0.0 5.1276805270435154E-5 4 0.0 0.0 0.0 0.0 5.1276805270435154E-5 5 0.0 0.0 0.0 0.0 5.1276805270435154E-5 6 0.0 0.0 0.0 0.0 5.1276805270435154E-5 7 0.0 0.0 0.0 0.0 5.1276805270435154E-5 8 0.0 0.0 0.0 0.0 5.1276805270435154E-5 9 0.0 0.0 0.0 0.0 1.0255361054087031E-4 10 0.0 0.0 0.0 0.0 1.0255361054087031E-4 11 2.5638402635217577E-5 0.0 0.0 2.5638402635217577E-5 1.0255361054087031E-4 12 2.5638402635217577E-5 0.0 0.0 7.691520790565273E-5 1.0255361054087031E-4 13 2.5638402635217577E-5 0.0 0.0 1.0255361054087031E-4 1.0255361054087031E-4 14 2.5638402635217577E-5 0.0 0.0 1.281920131760879E-4 1.281920131760879E-4 15 2.5638402635217577E-5 0.0 0.0 2.3074562371695818E-4 1.281920131760879E-4 16 2.5638402635217577E-5 0.0 0.0 3.332992342578285E-4 1.7946881844652305E-4 17 2.5638402635217577E-5 0.0 0.0 5.127680527043516E-4 2.0510722108174062E-4 18 2.5638402635217577E-5 0.0 0.0 5.384064553395691E-4 2.0510722108174062E-4 19 2.5638402635217577E-5 0.0 0.0 6.66598468515657E-4 2.0510722108174062E-4 20 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.001025536105408703 2.0510722108174062E-4 21 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.00169213457392436 2.0510722108174062E-4 22 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.0028715010951443688 2.0510722108174062E-4 23 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.003435545953119155 4.358528447986988E-4 24 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.004486720461163076 4.358528447986988E-4 25 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.005358426150760474 4.6149124743391636E-4 26 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.006050663021911348 4.6149124743391636E-4 27 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.01248590208335096 4.6149124743391636E-4 28 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.05945545571106956 4.6149124743391636E-4 29 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.14624144863128105 4.8712965006913393E-4 30 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.25330741803594964 4.8712965006913393E-4 31 2.5638402635217577E-5 2.5638402635217577E-5 0.0 0.6214236030724036 4.8712965006913393E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGG 75 2.0688651E-4 17.266666 29 AACGCAG 9415 0.0 17.232607 5 CTTATAC 2815 0.0 17.021313 37 CGCTACG 170 8.54925E-11 16.32353 10 TAATACC 375 0.0 16.28 4 ACGCAGA 10700 0.0 15.249533 6 GGTATCA 5415 0.0 15.20314 1 CTATACG 135 3.9789302E-7 15.074075 4 CGCAGAG 11000 0.0 14.833637 7 CGCAATC 175 2.242814E-9 14.8 22 ACGCGCA 225 1.8189894E-12 14.8 19 TAAGACT 660 0.0 14.575757 4 AACGACG 195 6.7484507E-10 14.23077 15 AGAGTAC 11455 0.0 14.212134 10 CAGAGTA 11725 0.0 14.026866 9 TCTTATA 4380 0.0 13.938357 37 CCCCTAT 465 0.0 13.924731 1 TCGTTAC 375 0.0 13.813334 23 GCAGAGT 12070 0.0 13.733222 8 TCAACGC 11925 0.0 13.667505 3 >>END_MODULE