##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727380.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5768690 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12954102231183 33.0 31.0 34.0 30.0 34.0 2 32.268331978317434 34.0 31.0 34.0 30.0 34.0 3 32.34736482632972 34.0 31.0 34.0 30.0 34.0 4 35.92213778171474 37.0 35.0 37.0 35.0 37.0 5 35.809153724675795 37.0 35.0 37.0 35.0 37.0 6 35.83170702533851 37.0 35.0 37.0 35.0 37.0 7 35.778027593786454 37.0 35.0 37.0 35.0 37.0 8 35.758927590146115 37.0 35.0 37.0 35.0 37.0 9 37.48392824020705 39.0 37.0 39.0 35.0 39.0 10 37.32507779062491 39.0 37.0 39.0 34.0 39.0 11 37.4382681336664 39.0 37.0 39.0 35.0 39.0 12 37.34639961585733 39.0 37.0 39.0 34.0 39.0 13 37.4072175831948 39.0 37.0 39.0 34.0 39.0 14 38.559095739240625 40.0 38.0 41.0 34.0 41.0 15 38.53440174459019 40.0 38.0 41.0 34.0 41.0 16 38.46502082795227 40.0 38.0 41.0 34.0 41.0 17 38.44472939263507 40.0 38.0 41.0 34.0 41.0 18 38.40352645054597 40.0 38.0 41.0 34.0 41.0 19 38.4238983200692 40.0 38.0 41.0 34.0 41.0 20 38.31170144348197 40.0 38.0 41.0 34.0 41.0 21 38.2372587190506 40.0 38.0 41.0 34.0 41.0 22 38.16905761966755 40.0 38.0 41.0 34.0 41.0 23 38.05558783709993 40.0 38.0 41.0 33.0 41.0 24 37.95109288243951 40.0 37.0 41.0 33.0 41.0 25 37.87109811759689 40.0 37.0 41.0 33.0 41.0 26 37.52154371269734 40.0 37.0 41.0 32.0 41.0 27 37.31455113725993 39.0 37.0 41.0 31.0 41.0 28 37.15886882463783 39.0 36.0 41.0 31.0 41.0 29 37.114105628834274 39.0 36.0 40.0 31.0 41.0 30 37.026916509640834 39.0 36.0 40.0 31.0 41.0 31 36.80718984726168 39.0 36.0 40.0 30.0 41.0 32 36.69785947936187 39.0 36.0 40.0 30.0 41.0 33 36.51917246376561 39.0 35.0 40.0 30.0 41.0 34 36.376585325264486 39.0 35.0 40.0 30.0 41.0 35 36.22591888279661 39.0 35.0 40.0 29.0 41.0 36 36.06867729068471 39.0 35.0 40.0 29.0 41.0 37 35.83633008534 38.0 35.0 40.0 27.0 41.0 38 35.72476073423949 38.0 35.0 40.0 27.0 41.0 39 35.546737300843 38.0 35.0 40.0 26.0 41.0 40 35.40781997299214 38.0 34.0 40.0 26.0 41.0 41 35.25762365459056 38.0 34.0 40.0 25.0 41.0 42 35.05437248318076 38.0 34.0 40.0 24.0 41.0 43 31.73829656299784 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 8.0 10 26.0 11 44.0 12 31.0 13 27.0 14 29.0 15 60.0 16 128.0 17 267.0 18 522.0 19 1141.0 20 2433.0 21 4454.0 22 8057.0 23 13084.0 24 20049.0 25 29495.0 26 39763.0 27 54211.0 28 70544.0 29 90230.0 30 115360.0 31 144295.0 32 180191.0 33 229305.0 34 294600.0 35 390560.0 36 549275.0 37 870918.0 38 1547813.0 39 1111770.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.17536390410995 18.835818877422778 13.088690846622022 25.900126371845257 2 18.576245213384666 21.864045389854542 34.49150500373568 25.068204393025106 3 18.752732422785762 22.372774408054514 31.30787059107007 27.566622578089657 4 14.821319918387015 15.879445766716533 33.254534391690314 36.04469992320614 5 14.457043106840548 37.5391986742224 33.747644612555014 14.256113606382037 6 35.850444381653375 35.31630231473697 14.12587606544987 14.707377238159792 7 29.55369416626652 31.42169192658992 20.17763131664208 18.846982590501483 8 28.318561059790003 35.1594036080982 18.62870079688803 17.89333453522377 9 27.337783794934378 13.597679889194946 18.244246094000545 40.82029022187013 10 15.699907604672811 28.24828513926039 33.34762311720685 22.704184138859947 11 37.18861647965136 21.30013919971432 20.908646503798956 20.602597816835363 12 21.498329776777744 25.491610746980687 29.898001105970334 23.112058370271242 13 32.046929198830234 19.768630312947998 23.62896948874008 24.555470999481685 14 22.255971459724826 20.49120337546306 26.231345418110525 31.02147974670159 15 25.75983455515897 28.393604093823726 21.829184788920884 24.01737656209642 16 24.344643237892832 26.382176889380432 24.344053849314143 24.929126023412596 17 24.254570795102527 26.39552480719193 25.325489842581245 24.024414555124302 18 24.069537451310435 25.72150696258596 26.070719695459456 24.13823589064415 19 25.384619384990355 25.582307248266073 26.190382911891607 22.84269045485197 20 24.57750373134975 25.347141205368985 25.959862637791247 24.115492425490014 21 24.26176480275418 25.77900701892457 26.352291421449237 23.60693675687201 22 25.02110531160454 25.169613898476083 25.39113732927233 24.418143460647045 23 24.255714902343513 25.416810402361715 25.901669183124763 24.425805512170008 24 24.040397386581702 25.263846731233606 26.020881690643805 24.674874191540887 25 24.407829160519977 25.00661328655206 25.897231433826395 24.688326119101564 26 24.003768619911973 25.304861242327114 26.2954327585639 24.39593737919701 27 24.63275024312279 25.747162700717148 25.809291190894296 23.81079586526577 28 24.173287176117974 26.05225796497992 25.52643667799795 24.248018180904158 29 24.134196845384306 26.093601840279163 26.032478777677426 23.7397225366591 30 24.63462241860804 25.812220798829543 25.53489613759796 24.018260644964453 31 24.284109563869787 25.259426316893435 26.047854885597943 24.408609233638835 32 23.853110498224034 25.795475229211483 25.83408018111564 24.517334091448838 33 24.00234715333984 25.141375251573585 25.97425065309455 24.88202694199203 34 24.25011571084596 25.20379843604007 26.560917643347103 23.985168209766865 35 24.07073356342601 25.15371774180967 26.291619067760617 24.483929627003704 36 23.732961902962373 24.792699902404188 26.891547301033686 24.58279089359976 37 23.408278135937273 24.648403710374453 27.175147217132483 24.768170936555787 38 23.465206138655397 24.376868925180588 27.364774324846714 24.793150611317298 39 22.913885128166015 24.394949286579795 28.123768134533144 24.56739745072105 40 23.376399147813455 24.045407189500562 28.167746923478294 24.41044673920769 41 22.75450752250511 24.17789827499831 28.50851753170997 24.55907667078661 42 22.31246608848803 24.444128562983973 28.477089252499265 24.766316096028735 43 22.319642761181484 23.612969322324478 28.252844233266135 25.81454368322791 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1654.0 1 1589.5 2 1525.0 3 2989.0 4 4453.0 5 4453.0 6 5015.5 7 5578.0 8 5959.0 9 6340.0 10 9504.0 11 12668.0 12 12668.0 13 22971.0 14 33274.0 15 52379.5 16 71485.0 17 54785.0 18 38085.0 19 38085.0 20 44410.0 21 50735.0 22 44357.5 23 37980.0 24 45581.5 25 53183.0 26 53183.0 27 64306.5 28 75430.0 29 85421.5 30 95413.0 31 110014.5 32 124616.0 33 124616.0 34 141565.0 35 158514.0 36 180532.5 37 202551.0 38 227939.5 39 253328.0 40 253328.0 41 282989.5 42 312651.0 43 342642.0 44 372633.0 45 404151.5 46 435670.0 47 435670.0 48 465624.0 49 495578.0 50 508154.0 51 520730.0 52 514247.0 53 507764.0 54 507764.0 55 479251.5 56 450739.0 57 420959.5 58 391180.0 59 359348.0 60 327516.0 61 327516.0 62 285984.0 63 244452.0 64 206642.5 65 168833.0 66 139615.5 67 110398.0 68 110398.0 69 91044.0 70 71690.0 71 58994.0 72 46298.0 73 38521.5 74 30745.0 75 30745.0 76 25640.0 77 20535.0 78 16970.5 79 13406.0 80 11060.0 81 8714.0 82 8714.0 83 6918.0 84 5122.0 85 4103.0 86 3084.0 87 2660.0 88 2236.0 89 2236.0 90 1704.5 91 1173.0 92 826.0 93 479.0 94 329.0 95 179.0 96 179.0 97 114.0 98 49.0 99 36.5 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5768690.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.69123643298646 #Duplication Level Percentage of deduplicated Percentage of total 1 80.69996616238544 45.749808618458 2 10.15292829932152 11.511641174079907 3 3.399970015385404 5.782455120218358 4 1.6238209457987998 3.6822566865246182 5 0.952723093485814 2.7005525073985273 6 0.6003825410733863 2.0421857151737126 7 0.42250104039398984 1.676647446191091 8 0.3242916827768441 1.470759716924249 9 0.25091860646519315 1.2802397440098374 >10 1.453581499874872 15.031055265076729 >50 0.08411854962687691 3.2282074553420967 >100 0.032567624686340294 3.153702318249548 >500 0.001527360706059634 0.5890911907645212 >1k 5.803905379953619E-4 0.5197124472946859 >5k 0.0 0.0 >10k+ 1.2218748162682488E-4 1.5816845942940083 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 44878 0.7779582539536706 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18199 0.3154789042226225 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15194 0.2633873548413938 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13064 0.2264638938823199 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.466991639349662E-5 2 1.733495819674831E-5 0.0 0.0 0.0 5.2004874590244924E-5 3 1.733495819674831E-5 0.0 0.0 0.0 5.2004874590244924E-5 4 1.733495819674831E-5 0.0 0.0 0.0 5.2004874590244924E-5 5 3.466991639349662E-5 0.0 0.0 0.0 5.2004874590244924E-5 6 3.466991639349662E-5 0.0 0.0 0.0 1.2134470737723816E-4 7 5.2004874590244924E-5 0.0 0.0 0.0 1.2134470737723816E-4 8 6.933983278699324E-5 0.0 0.0 0.0 1.3867966557398647E-4 9 8.667479098374155E-5 0.0 0.0 0.0 1.3867966557398647E-4 10 1.2134470737723816E-4 0.0 0.0 3.466991639349662E-5 1.5601462377073477E-4 11 1.2134470737723816E-4 0.0 0.0 3.466991639349662E-5 1.5601462377073477E-4 12 1.3867966557398647E-4 0.0 0.0 5.2004874590244924E-5 1.5601462377073477E-4 13 1.3867966557398647E-4 0.0 0.0 6.933983278699324E-5 1.906845401642314E-4 14 1.5601462377073477E-4 0.0 0.0 8.667479098374155E-5 2.600243729512246E-4 15 1.5601462377073477E-4 0.0 0.0 1.5601462377073477E-4 2.7735933114797295E-4 16 1.5601462377073477E-4 0.0 0.0 2.600243729512246E-4 3.6403412213171447E-4 17 1.5601462377073477E-4 1.733495819674831E-5 0.0 4.5070891311545604E-4 3.6403412213171447E-4 18 1.5601462377073477E-4 1.733495819674831E-5 0.0 5.547186622959459E-4 3.6403412213171447E-4 19 1.5601462377073477E-4 1.733495819674831E-5 0.0 7.627381606569256E-4 3.6403412213171447E-4 20 1.906845401642314E-4 1.733495819674831E-5 0.0 0.0011614421991821367 3.6403412213171447E-4 21 2.080194983609797E-4 1.733495819674831E-5 0.0 0.0018201706106585724 3.813690803284628E-4 22 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.003189632308201689 3.813690803284628E-4 23 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.0038483607196781247 4.333739549187077E-4 24 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.005113812668040751 4.333739549187077E-4 25 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.005720536204926942 4.680438713122043E-4 26 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.006812638571322085 4.680438713122043E-4 27 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.012983883689364484 4.680438713122043E-4 28 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.04519223601892284 4.680438713122043E-4 29 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.11714964749362507 4.680438713122043E-4 30 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.2106717469650822 4.680438713122043E-4 31 2.2535445655772802E-4 1.733495819674831E-5 0.0 0.573093717984499 5.027137877057009E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3975 0.0 18.662893 37 TCTTATA 6760 0.0 15.462279 37 AACGCAG 19055 0.0 15.427184 5 TACTTAC 1465 0.0 15.027304 31 GTACTTA 1685 0.0 13.943621 30 CGCAGAG 21610 0.0 13.645997 7 ACGCAGA 21765 0.0 13.5318165 6 CTCGTTA 990 0.0 13.267677 22 AGAGTAC 22050 0.0 13.247846 10 TCGTTAC 845 0.0 13.136095 23 CAGAGTA 22615 0.0 12.965951 9 TTATACT 815 0.0 12.93865 4 GAGTACT 13150 0.0 12.858556 11 GCAGAGT 23070 0.0 12.758345 8 CGCTACG 510 0.0 12.696078 10 CTCTTAT 10245 0.0 12.676428 37 TATACTG 730 0.0 12.671232 5 AGTACTT 13485 0.0 12.497961 12 ATCAACG 23790 0.0 12.3799925 2 CAACGCA 23900 0.0 12.353974 4 >>END_MODULE