##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5265878 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1473596615797 33.0 31.0 34.0 30.0 34.0 2 32.28326026542962 34.0 31.0 34.0 30.0 34.0 3 32.36108945174955 34.0 31.0 34.0 30.0 34.0 4 35.93262225216763 37.0 35.0 37.0 35.0 37.0 5 35.82212842758606 37.0 35.0 37.0 35.0 37.0 6 35.84500438483383 37.0 35.0 37.0 35.0 37.0 7 35.78803192933828 37.0 35.0 37.0 35.0 37.0 8 35.76561211634603 37.0 35.0 37.0 35.0 37.0 9 37.49503691502158 39.0 37.0 39.0 35.0 39.0 10 37.33522671812754 39.0 37.0 39.0 34.0 39.0 11 37.44727735811578 39.0 37.0 39.0 35.0 39.0 12 37.35341456828282 39.0 37.0 39.0 34.0 39.0 13 37.416313290964965 39.0 37.0 39.0 35.0 39.0 14 38.55826378810903 40.0 38.0 41.0 34.0 41.0 15 38.53251632491296 40.0 38.0 41.0 34.0 41.0 16 38.46935629727844 40.0 38.0 41.0 34.0 41.0 17 38.44538004868324 40.0 38.0 41.0 34.0 41.0 18 38.40809338917461 40.0 38.0 41.0 34.0 41.0 19 38.422421674030424 40.0 38.0 41.0 34.0 41.0 20 38.307893384541 40.0 38.0 41.0 34.0 41.0 21 38.23404473100212 40.0 38.0 41.0 34.0 41.0 22 38.16143936490743 40.0 38.0 41.0 34.0 41.0 23 38.053754188760166 40.0 38.0 41.0 33.0 41.0 24 37.945868286352244 40.0 37.0 41.0 33.0 41.0 25 37.86160161705227 40.0 37.0 41.0 33.0 41.0 26 37.50490668412751 40.0 37.0 41.0 32.0 41.0 27 37.28636231222979 39.0 37.0 41.0 31.0 41.0 28 37.12667972938226 39.0 36.0 41.0 31.0 41.0 29 37.07092967212685 39.0 36.0 40.0 31.0 41.0 30 36.97179976444574 39.0 36.0 40.0 31.0 41.0 31 36.751437651992696 39.0 36.0 40.0 30.0 41.0 32 36.632042937569004 39.0 36.0 40.0 30.0 41.0 33 36.4425550686894 39.0 35.0 40.0 30.0 41.0 34 36.29658738770629 39.0 35.0 40.0 30.0 41.0 35 36.13359481552744 39.0 35.0 40.0 29.0 41.0 36 35.969463022120905 38.0 35.0 40.0 28.0 41.0 37 35.728729757886526 38.0 35.0 40.0 27.0 41.0 38 35.613057879426755 38.0 35.0 40.0 26.0 41.0 39 35.43082312199409 38.0 35.0 40.0 26.0 41.0 40 35.283563348790075 38.0 34.0 40.0 25.0 41.0 41 35.11927735507735 38.0 34.0 40.0 24.0 41.0 42 34.897314369987306 38.0 34.0 40.0 24.0 41.0 43 31.61974641265901 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 10.0 11 20.0 12 24.0 13 30.0 14 29.0 15 78.0 16 164.0 17 284.0 18 552.0 19 1081.0 20 2320.0 21 4452.0 22 7854.0 23 12670.0 24 19569.0 25 27524.0 26 38075.0 27 50518.0 28 66162.0 29 84320.0 30 106339.0 31 132789.0 32 166386.0 33 209669.0 34 270422.0 35 357037.0 36 503110.0 37 799055.0 38 1393232.0 39 1012099.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.396747512950355 18.683854810157012 13.165990552762521 25.753407124130106 2 18.597259564311972 22.140790196810485 34.31646156633329 24.945488672544254 3 18.63457527880441 22.429497986850436 31.318006228021233 27.617920506323923 4 14.605446613081426 15.743319537596578 33.53476856091235 36.11646528840964 5 14.523086178601174 37.54029242606836 33.76454980536959 14.172071589960877 6 35.806393539690816 35.63939384847124 13.962059128601156 14.592153483236794 7 29.86643442935822 31.244837043319272 20.114043659955662 18.774684867366847 8 28.584331046028794 34.94763836154199 18.481058619284383 17.98697197314484 9 27.342847669467467 13.608025100467577 18.23154657210061 40.817580657964356 10 15.67831613265632 28.25844047279485 33.11423090318462 22.94901249136421 11 37.11553894716133 21.38663296035343 20.891862667536166 20.605965424949076 12 21.669282881221328 25.852687813884028 29.61646661772263 22.861562687172015 13 32.31385155523922 19.521284009997952 23.568890126204973 24.595974308557853 14 22.25571879941009 20.504045099411723 26.294817312516543 30.945418788661645 15 25.697006273217877 28.450735091090223 21.726443339553253 24.12581529613865 16 24.422840787424242 26.21135544727774 24.191730229982543 25.17407353531548 17 24.396425439404407 26.3806339607564 25.29124297980318 23.93169762003601 18 24.209998788426166 25.558396909309334 25.97623796069715 24.25536634156735 19 25.51802377495263 25.47968259044361 26.094489845757916 22.907803788845847 20 24.630574426524884 25.528753229755797 25.828152494227936 24.012519849491387 21 24.32321827433146 25.879236093202312 26.097908079146535 23.699637553319693 22 24.949609542796093 25.414185440680548 25.30888486212556 24.327320154397807 23 24.26537416932181 25.511529131514248 25.679041557742128 24.54405514142181 24 24.09463341156024 25.4967927475722 25.785880341322 24.622693499545566 25 24.425955177844987 25.125173807672716 25.763130099102185 24.685740915380112 26 23.960600682355345 25.548408071740365 26.173602958518977 24.317388287385313 27 24.556113909209444 25.992930333744912 25.63804174726418 23.812914009781462 28 24.03572585616302 26.21486863159382 25.597668612907476 24.151736899335685 29 24.09478533304418 26.320643964786118 25.837020910852853 23.747549791316853 30 24.42606911895794 26.15250486243699 25.47613142575654 23.945294592848523 31 24.121979278669198 25.42328173953138 25.968622896314724 24.4861160854847 32 23.625784721940008 26.039000523749316 25.832463266334692 24.502751487975985 33 23.915024237173743 25.44570914859782 25.867785011350435 24.771481602878 34 24.084131838982977 25.463237089807244 26.475584888218073 23.977046182991707 35 23.941306653895133 25.53439331484702 26.171627979227775 24.35267205203007 36 23.707803333081397 25.014916790704227 26.717861674729264 24.55941820148511 37 23.344748966838957 24.80158104688335 26.924569843813323 24.92910014246437 38 23.1781860498857 24.560443671501694 27.45019918805563 24.81117109055698 39 22.7773791948845 24.545764258116122 28.017246126856715 24.65961042014266 40 23.081393074431272 24.255670184535226 28.285121683411578 24.37781505762192 41 22.509560608886115 24.223652731795152 28.706115105591127 24.5606715537276 42 22.006871408718546 24.44705327392697 28.736290510338446 24.80978480701604 43 21.971872496856175 23.673013313259442 28.525879255083385 25.829234934800997 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1107.0 1 1103.5 2 1100.0 3 2594.5 4 4089.0 5 4089.0 6 4732.0 7 5375.0 8 5694.0 9 6013.0 10 9256.0 11 12499.0 12 12499.0 13 22877.0 14 33255.0 15 53959.5 16 74664.0 17 56448.5 18 38233.0 19 38233.0 20 43413.0 21 48593.0 22 41922.0 23 35251.0 24 42261.0 25 49271.0 26 49271.0 27 59894.0 28 70517.0 29 79946.0 30 89375.0 31 102073.0 32 114771.0 33 114771.0 34 130389.0 35 146007.0 36 166441.5 37 186876.0 38 210642.0 39 234408.0 40 234408.0 41 259160.5 42 283913.0 43 310594.5 44 337276.0 45 362433.5 46 387591.0 47 387591.0 48 411475.5 49 435360.0 50 448127.5 51 460895.0 52 458046.5 53 455198.0 54 455198.0 55 432513.0 56 409828.0 57 383114.0 58 356400.0 59 325396.5 60 294393.0 61 294393.0 62 258856.0 63 223319.0 64 190937.0 65 158555.0 66 132524.0 67 106493.0 68 106493.0 69 87913.5 70 69334.0 71 58366.0 72 47398.0 73 39447.5 74 31497.0 75 31497.0 76 26359.0 77 21221.0 78 17698.5 79 14176.0 80 11420.5 81 8665.0 82 8665.0 83 6980.0 84 5295.0 85 4241.0 86 3187.0 87 2818.5 88 2450.0 89 2450.0 90 1840.0 91 1230.0 92 852.5 93 475.0 94 352.0 95 229.0 96 229.0 97 143.5 98 58.0 99 48.0 100 38.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5265878.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.678230297992584 #Duplication Level Percentage of deduplicated Percentage of total 1 82.94896811568684 47.843496859574294 2 9.15876123292964 10.565222792744846 3 2.8609327779287894 4.950406188973572 4 1.412868491015003 3.259670168221624 5 0.8201928933954306 2.3653637297019263 6 0.5173090661396949 1.790248287122688 7 0.36331562638052606 1.466878165846479 8 0.2699691506035314 1.2457074273491142 9 0.21085978728463783 1.094581743443016 >10 1.290111902778237 14.030918693283134 >50 0.1002844185579982 3.966928231253523 >100 0.04402282954496588 4.474297520929035 >500 0.0017122320440406224 0.6657648028526564 >1k 5.597660515775739E-4 0.5527417168321611 >5k 0.0 0.0 >10k+ 1.3170965919079967E-4 1.727773671871938 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47232 0.8969444411739126 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16089 0.30553309438615933 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14599 0.2772377180025819 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13054 0.2478978814169261 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.899018549233385E-5 0.0 0.0 0.0 6 0.0 1.899018549233385E-5 0.0 0.0 1.899018549233385E-5 7 0.0 1.899018549233385E-5 0.0 0.0 3.79803709846677E-5 8 0.0 1.899018549233385E-5 0.0 0.0 3.79803709846677E-5 9 0.0 1.899018549233385E-5 0.0 0.0 5.6970556477001555E-5 10 0.0 1.899018549233385E-5 0.0 0.0 5.6970556477001555E-5 11 1.899018549233385E-5 1.899018549233385E-5 0.0 5.6970556477001555E-5 5.6970556477001555E-5 12 1.899018549233385E-5 1.899018549233385E-5 0.0 7.59607419693354E-5 5.6970556477001555E-5 13 1.899018549233385E-5 1.899018549233385E-5 0.0 1.1394111295400311E-4 5.6970556477001555E-5 14 3.79803709846677E-5 1.899018549233385E-5 0.0 1.3293129844633696E-4 7.59607419693354E-5 15 3.79803709846677E-5 1.899018549233385E-5 0.0 2.468724114003401E-4 7.59607419693354E-5 16 3.79803709846677E-5 1.899018549233385E-5 0.0 4.367742663236786E-4 9.495092746166926E-5 17 3.79803709846677E-5 1.899018549233385E-5 0.0 7.975877906780217E-4 9.495092746166926E-5 18 3.79803709846677E-5 1.899018549233385E-5 0.0 9.115289036320249E-4 1.3293129844633696E-4 19 7.59607419693354E-5 1.899018549233385E-5 0.0 0.0013483031699557035 1.3293129844633696E-4 20 7.59607419693354E-5 1.899018549233385E-5 0.0 0.0019939694766950545 1.3293129844633696E-4 21 7.59607419693354E-5 1.899018549233385E-5 0.0 0.00305741986426575 1.519214839386708E-4 22 7.59607419693354E-5 1.899018549233385E-5 0.0 0.005203310824899475 1.519214839386708E-4 23 7.59607419693354E-5 1.899018549233385E-5 0.0 0.006190800470500836 2.2788222590800622E-4 24 7.59607419693354E-5 1.899018549233385E-5 0.0 0.008108809205226554 2.2788222590800622E-4 25 7.59607419693354E-5 1.899018549233385E-5 0.0 0.009153269407304916 2.2788222590800622E-4 26 7.59607419693354E-5 1.899018549233385E-5 0.0 0.01040662164979895 2.2788222590800622E-4 27 7.59607419693354E-5 1.899018549233385E-5 0.0 0.01695823564465413 2.2788222590800622E-4 28 9.495092746166926E-5 1.899018549233385E-5 0.0 0.054539812733982826 2.2788222590800622E-4 29 9.495092746166926E-5 1.899018549233385E-5 0.0 0.1443443999272296 2.2788222590800622E-4 30 9.495092746166926E-5 1.899018549233385E-5 0.0 0.2584374343651714 2.2788222590800622E-4 31 9.495092746166926E-5 1.899018549233385E-5 0.0 0.6811399732390306 2.2788222590800622E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4180 0.0 19.29665 37 AACGCAG 19355 0.0 16.124773 5 CGCAGAG 21710 0.0 14.409719 7 TCTTATA 6750 0.0 14.16963 37 ACGCAGA 22105 0.0 14.152227 6 TAGATCG 210 1.364242E-10 14.095238 5 GAGTACT 13215 0.0 14.027242 11 AGAGTAC 22335 0.0 13.898813 10 CAGAGTA 22655 0.0 13.816817 9 AGTACTT 13550 0.0 13.721403 12 GCAGAGT 23125 0.0 13.56 8 TACTTAC 970 0.0 13.159794 31 GTACTTT 14140 0.0 13.083451 13 GGGTAAG 2225 0.0 12.970786 1 CTCTTAT 10530 0.0 12.948243 37 TAGACAG 835 0.0 12.628742 5 TACTTTT 14750 0.0 12.592543 14 TATACAG 900 0.0 12.538889 5 GTAAGAG 2305 0.0 12.520608 3 TATACTG 630 0.0 12.333334 5 >>END_MODULE