##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727378.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8050869 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07908512733222 33.0 31.0 34.0 30.0 34.0 2 32.228128044314225 33.0 31.0 34.0 30.0 34.0 3 32.309383247945036 34.0 31.0 34.0 30.0 34.0 4 35.904232077307434 37.0 35.0 37.0 35.0 37.0 5 35.781084253140875 37.0 35.0 37.0 35.0 37.0 6 35.79538544224232 37.0 35.0 37.0 35.0 37.0 7 35.74739099592851 37.0 35.0 37.0 35.0 37.0 8 35.71859758244731 37.0 35.0 37.0 33.0 37.0 9 37.43602597433892 39.0 37.0 39.0 35.0 39.0 10 37.27703531134341 39.0 37.0 39.0 34.0 39.0 11 37.37653761351725 39.0 37.0 39.0 34.0 39.0 12 37.28464219204163 39.0 37.0 39.0 34.0 39.0 13 37.34140798962199 39.0 37.0 39.0 34.0 39.0 14 38.50163913982453 40.0 38.0 41.0 34.0 41.0 15 38.4634081115964 40.0 38.0 41.0 34.0 41.0 16 38.39942135439044 40.0 38.0 41.0 34.0 41.0 17 38.359530753760865 40.0 38.0 41.0 34.0 41.0 18 38.313461938083954 40.0 38.0 41.0 34.0 41.0 19 38.320056629911626 40.0 38.0 41.0 34.0 41.0 20 38.20446028869679 40.0 38.0 41.0 34.0 41.0 21 38.12569313946109 40.0 38.0 41.0 33.0 41.0 22 38.050715022192016 40.0 38.0 41.0 33.0 41.0 23 37.941574505808006 40.0 37.0 41.0 33.0 41.0 24 37.83639207146458 40.0 37.0 41.0 33.0 41.0 25 37.75345866390324 40.0 37.0 41.0 32.0 41.0 26 37.401692165156334 39.0 37.0 41.0 32.0 41.0 27 37.1856410780004 39.0 36.0 41.0 31.0 41.0 28 37.04646902092184 39.0 36.0 40.0 31.0 41.0 29 37.00754005561387 39.0 36.0 40.0 31.0 41.0 30 36.930577804706544 39.0 36.0 40.0 30.0 41.0 31 36.72509762610719 39.0 36.0 40.0 30.0 41.0 32 36.623509213725875 39.0 36.0 40.0 30.0 41.0 33 36.448246270061034 39.0 35.0 40.0 30.0 41.0 34 36.31638758499238 39.0 35.0 40.0 30.0 41.0 35 36.16485400520118 39.0 35.0 40.0 29.0 41.0 36 36.018843307474015 38.0 35.0 40.0 28.0 41.0 37 35.787915813808425 38.0 35.0 40.0 27.0 41.0 38 35.680642549270146 38.0 35.0 40.0 27.0 41.0 39 35.51692059577668 38.0 35.0 40.0 26.0 41.0 40 35.3888947888731 38.0 34.0 40.0 26.0 41.0 41 35.25847495469122 38.0 34.0 40.0 25.0 41.0 42 35.06400489189428 38.0 34.0 40.0 24.0 41.0 43 31.690587314238996 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 25.0 11 28.0 12 37.0 13 24.0 14 38.0 15 92.0 16 179.0 17 351.0 18 799.0 19 1649.0 20 3522.0 21 6734.0 22 11836.0 23 19428.0 24 29725.0 25 42772.0 26 58758.0 27 78453.0 28 101977.0 29 130515.0 30 165464.0 31 207016.0 32 258279.0 33 324208.0 34 418390.0 35 553023.0 36 775641.0 37 1223788.0 38 2185859.0 39 1452247.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.41696144850947 18.75037340689558 12.584827799334459 26.247837345260493 2 18.806889045145315 21.32898945443032 34.29272045042591 25.571401049998453 3 18.62739289386028 22.10141538758114 30.838149273078468 28.433042445480112 4 14.805656383180498 15.652124012948168 33.55665084104585 35.98556876282547 5 14.581208562702983 37.02538198050422 34.022898646096465 14.370510810696334 6 36.3296310000821 35.394415186733255 13.958865806908547 14.317088006276094 7 30.285078542452993 30.976531850164253 19.954032291420965 18.784357315961792 8 28.2679795187327 34.92726064726677 18.544731009782918 18.26002882421761 9 27.122401320900885 13.496195255443855 17.99664110793506 41.3847623157202 10 15.600564361437256 27.7612640324914 33.56761860117212 23.07055300489922 11 37.57514871997048 20.98936152109791 20.86676605966387 20.568723699267743 12 21.82327150025668 25.06022641779415 29.741857680208184 23.37464440174098 13 32.14077884014757 19.47102853120576 23.317482870482678 25.070709758163996 14 22.54641082844597 20.02340368474509 25.475051202547206 31.95513428426174 15 25.87677181183795 27.97891755535955 21.32405830973029 24.820252323072207 16 25.189032388925963 26.07062666154424 23.52980777603014 25.210533173499655 17 24.607492681845898 26.17065313073657 24.811098031777686 24.410756155639845 18 24.640569856496235 25.422485448465252 25.262900191271275 24.674044503767234 19 25.62501016970963 25.375844520634978 25.38001798315188 23.619127326503513 20 25.341438296909313 25.253621689782808 25.025584194699974 24.379355818607902 21 25.0207772601939 25.449364534437212 25.09065791531324 24.439200290055645 22 25.52422601833417 25.0829693043074 24.616448236830085 24.776356440528346 23 24.977030429882788 25.129622653157067 24.756557335611845 25.1367895813483 24 24.87935153335621 25.008915186671153 24.923185310803095 25.18854796916954 25 25.144254614005025 24.701668850902927 24.979390423567942 25.174686111524107 26 24.753551448918124 25.029012396053147 25.196422895466313 25.021013259562412 27 25.08131730872779 25.36872727652133 24.93527096267496 24.61468445207592 28 24.92402994012199 25.470604477603597 24.83466070557104 24.770704876703373 29 24.808042461006384 25.68519000868105 25.030341445128467 24.476426085184098 30 25.036291113418933 25.569898106651596 24.748558199121113 24.645252580808357 31 24.968025190821017 25.03612964016679 24.98050831531354 25.01533685369865 32 24.444827011841827 25.44976200705787 25.021336206066696 25.084074775033606 33 24.61760339163387 25.079093946255988 25.01293959695531 25.290363065154832 34 24.83128218829545 24.84976466515602 25.533492098803244 24.78546104774528 35 24.637787548151636 24.961553839715936 25.439763086444454 24.960895525687974 36 24.498982656406408 24.714648816171273 25.695909348419406 25.09045917900291 37 24.213535209677364 24.36698448328994 26.048479983961982 25.371000323070714 38 23.895768270481113 24.408321635838316 26.351242331728415 25.344667761952156 39 23.651831870571986 24.142114348152976 27.009519096634165 25.196534684640877 40 23.894762167910073 23.936298056768777 27.198889958338658 24.97004981698249 41 23.524975999485275 23.85336291026472 27.53557411007433 25.086086980175683 42 23.04609601770939 23.970766385591418 27.59405226938856 25.389085327310628 43 23.106201330564442 23.15938813561617 27.575843054954692 26.158567478864704 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 469.0 1 593.0 2 717.0 3 1785.5 4 2854.0 5 2854.0 6 3407.0 7 3960.0 8 4265.0 9 4570.0 10 6851.0 11 9132.0 12 9132.0 13 17372.0 14 25612.0 15 41983.0 16 58354.0 17 45584.0 18 32814.0 19 32814.0 20 39484.0 21 46154.0 22 43395.5 23 40637.0 24 50404.0 25 60171.0 26 60171.0 27 74675.0 28 89179.0 29 103837.0 30 118495.0 31 139679.5 32 160864.0 33 160864.0 34 186492.5 35 212121.0 36 245310.0 37 278499.0 38 318224.0 39 357949.0 40 357949.0 41 401280.0 42 444611.0 43 488191.0 44 531771.0 45 572978.0 46 614185.0 47 614185.0 48 654631.0 49 695077.0 50 714455.0 51 733833.0 52 731037.0 53 728241.0 54 728241.0 55 696837.0 56 665433.0 57 623178.0 58 580923.0 59 531163.0 60 481403.0 61 481403.0 62 420585.5 63 359768.0 64 306189.5 65 252611.0 66 209473.5 67 166336.0 68 166336.0 69 136461.5 70 106587.0 71 87768.5 72 68950.0 73 56390.0 74 43830.0 75 43830.0 76 36558.5 77 29287.0 78 23937.0 79 18587.0 80 15059.5 81 11532.0 82 11532.0 83 9140.5 84 6749.0 85 5330.5 86 3912.0 87 3258.0 88 2604.0 89 2604.0 90 1939.5 91 1275.0 92 889.5 93 504.0 94 356.5 95 209.0 96 209.0 97 138.5 98 68.0 99 50.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8050869.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.80821728505987 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6605376954853 45.015208140394066 2 9.96199920350237 11.119228322853072 3 3.4153859228071717 5.71819799077072 4 1.6725928729777775 3.7337770593834536 5 0.979604836246187 2.7334999777361344 6 0.630528009374342 2.1113186490887728 7 0.4382075183100915 1.711890627845751 8 0.3340679282804194 1.4914988423554756 9 0.24336496312424527 1.2223588267447618 >10 1.5093287309931287 15.717120014816613 >50 0.11254404257277123 4.2609269685504545 >100 0.04063694214266601 3.7104606899922703 >500 8.232189023929633E-4 0.30617127182337883 >1k 2.891469910438441E-4 0.2527515824553066 >5k 0.0 0.0 >10k+ 8.89682900798052E-5 0.8955910351898161 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36831 0.45747856535735454 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13494 0.16760923572349767 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11467 0.14243182940872595 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10358 0.12865691889906544 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2421019395545996E-5 2 0.0 0.0 0.0 0.0 1.2421019395545996E-5 3 0.0 0.0 0.0 0.0 1.2421019395545996E-5 4 0.0 0.0 0.0 1.2421019395545996E-5 1.2421019395545996E-5 5 0.0 1.2421019395545996E-5 0.0 1.2421019395545996E-5 1.2421019395545996E-5 6 0.0 1.2421019395545996E-5 0.0 1.2421019395545996E-5 6.210509697772998E-5 7 0.0 1.2421019395545996E-5 0.0 1.2421019395545996E-5 6.210509697772998E-5 8 1.2421019395545996E-5 1.2421019395545996E-5 0.0 1.2421019395545996E-5 9.936815516436797E-5 9 1.2421019395545996E-5 1.2421019395545996E-5 0.0 1.2421019395545996E-5 1.6147325214209795E-4 10 3.726305818663799E-5 1.2421019395545996E-5 0.0 1.2421019395545996E-5 1.6147325214209795E-4 11 6.210509697772998E-5 1.2421019395545996E-5 0.0 3.726305818663799E-5 1.6147325214209795E-4 12 6.210509697772998E-5 1.2421019395545996E-5 0.0 4.9684077582183984E-5 1.6147325214209795E-4 13 6.210509697772998E-5 1.2421019395545996E-5 0.0 4.9684077582183984E-5 1.6147325214209795E-4 14 6.210509697772998E-5 1.2421019395545996E-5 0.0 4.9684077582183984E-5 2.484203879109199E-4 15 6.210509697772998E-5 1.2421019395545996E-5 0.0 6.210509697772998E-5 2.981044654931039E-4 16 7.452611637327598E-5 1.2421019395545996E-5 0.0 1.2421019395545996E-4 3.726305818663799E-4 17 7.452611637327598E-5 1.2421019395545996E-5 0.0 2.2357834911982793E-4 3.726305818663799E-4 18 7.452611637327598E-5 1.2421019395545996E-5 0.0 2.8568344609755794E-4 3.974726206574719E-4 19 7.452611637327598E-5 1.2421019395545996E-5 0.0 4.347356788441099E-4 3.974726206574719E-4 20 9.936815516436797E-5 1.2421019395545996E-5 0.0 7.079981055461218E-4 3.974726206574719E-4 21 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.0012296809201590537 4.2231465944856387E-4 22 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.0019997841226829056 4.2231465944856387E-4 23 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.0023475726657581934 5.216828146129319E-4 24 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.003092833829490953 5.216828146129319E-4 25 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.003564832566521701 5.341038340084778E-4 26 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.004397040866023283 5.341038340084778E-4 27 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.008297240956224725 5.465248534040238E-4 28 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.031710862516828926 5.465248534040238E-4 29 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.08735702940887499 5.465248534040238E-4 30 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.16015662408617007 5.465248534040238E-4 31 9.936815516436797E-5 1.2421019395545996E-5 0.0 0.4438527070804406 5.589458727995699E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4350 0.0 18.11724 37 TCTTATA 7480 0.0 15.977274 37 AACGCAG 18855 0.0 14.904004 5 ACGCAGA 21185 0.0 13.238612 6 GAGTACT 11090 0.0 13.195221 11 CGCAGAG 21430 0.0 13.0786295 7 AGAGTAC 21315 0.0 13.019001 10 CTCTTAT 11710 0.0 12.891546 37 CAGAGTA 22050 0.0 12.836735 9 TCGTTAC 685 0.0 12.693431 23 AGTACTT 11625 0.0 12.619785 12 TTATACT 1235 0.0 12.582995 4 GCAGAGT 22865 0.0 12.460093 8 GTACTTT 12030 0.0 12.27182 13 ACCGTAT 305 1.8189894E-12 12.131147 8 GTATTAC 565 0.0 12.115045 1 TAATACT 1100 0.0 12.109092 4 TCTATAC 910 0.0 11.994506 3 GGTATCA 12940 0.0 11.93779 1 CAACGCA 23515 0.0 11.926855 4 >>END_MODULE