##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727377.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1329569 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06241045030382 33.0 31.0 34.0 30.0 34.0 2 32.22111300729785 33.0 31.0 34.0 30.0 34.0 3 32.28909142737233 34.0 31.0 34.0 30.0 34.0 4 35.89426874423215 37.0 35.0 37.0 35.0 37.0 5 35.765219405687105 37.0 35.0 37.0 35.0 37.0 6 35.77706835824241 37.0 35.0 37.0 35.0 37.0 7 35.72439339364862 37.0 35.0 37.0 35.0 37.0 8 35.67933292668526 37.0 35.0 37.0 33.0 37.0 9 37.41389277277072 39.0 37.0 39.0 35.0 39.0 10 37.23692414609546 39.0 37.0 39.0 34.0 39.0 11 37.33941149349902 39.0 37.0 39.0 34.0 39.0 12 37.22800471430968 39.0 37.0 39.0 34.0 39.0 13 37.282657763530885 39.0 37.0 39.0 34.0 39.0 14 38.44264946008819 40.0 38.0 41.0 34.0 41.0 15 38.386330457464034 40.0 38.0 41.0 34.0 41.0 16 38.30140444008547 40.0 38.0 41.0 34.0 41.0 17 38.24333675048079 40.0 38.0 41.0 33.0 41.0 18 38.17735897873672 40.0 38.0 41.0 33.0 41.0 19 38.153303062872254 40.0 38.0 41.0 33.0 41.0 20 38.013584853437465 40.0 37.0 41.0 33.0 41.0 21 37.91869094420824 40.0 37.0 41.0 33.0 41.0 22 37.8349186841751 40.0 37.0 41.0 33.0 41.0 23 37.701217462200155 40.0 37.0 41.0 32.0 41.0 24 37.5551761510685 39.0 37.0 41.0 32.0 41.0 25 37.46012880865905 39.0 37.0 41.0 32.0 41.0 26 37.04833145177121 39.0 36.0 40.0 31.0 41.0 27 36.79801950857759 39.0 36.0 40.0 30.0 41.0 28 36.630826230154284 39.0 36.0 40.0 30.0 41.0 29 36.58866670327001 39.0 36.0 40.0 30.0 41.0 30 36.488434221917025 39.0 36.0 40.0 30.0 41.0 31 36.26097028435531 39.0 35.0 40.0 29.0 41.0 32 36.15546616986407 39.0 35.0 40.0 29.0 41.0 33 35.95591879774574 39.0 35.0 40.0 27.0 41.0 34 35.786032165310715 38.0 35.0 40.0 27.0 41.0 35 35.625937427843155 38.0 35.0 40.0 26.0 41.0 36 35.462511535693146 38.0 34.0 40.0 26.0 41.0 37 35.19357852055816 38.0 34.0 40.0 25.0 41.0 38 35.08220934754044 38.0 34.0 40.0 24.0 41.0 39 34.89550222666142 38.0 33.0 40.0 24.0 41.0 40 34.76340001910393 38.0 33.0 40.0 24.0 41.0 41 34.609642673678465 38.0 33.0 40.0 23.0 41.0 42 34.40558180884181 38.0 33.0 40.0 23.0 41.0 43 30.78138103400425 35.0 27.0 38.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 1.0 12 7.0 13 5.0 14 10.0 15 25.0 16 46.0 17 90.0 18 210.0 19 449.0 20 888.0 21 1659.0 22 2756.0 23 4552.0 24 6823.0 25 9301.0 26 12556.0 27 15965.0 28 19945.0 29 25117.0 30 30813.0 31 38000.0 32 46709.0 33 57518.0 34 72357.0 35 94502.0 36 129337.0 37 195489.0 38 345243.0 39 219191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.049890603646745 17.356752451358297 11.72688292221013 27.866474022784825 2 20.772295382939884 19.90968501822771 31.854834160543753 27.46318543828865 3 19.601540047940347 20.43143304333961 29.22097311233941 30.74605379638063 4 16.020229111840003 15.004185566901757 30.883090685778626 38.09249463547962 5 16.023688879629415 35.513162536130125 32.750688380971575 15.71246020326888 6 39.049195641595134 32.961508579095934 12.940885354577311 15.048410424731623 7 32.11732523847954 29.510841483217494 18.32142596585811 20.05040731244486 8 29.708198671900444 32.991894365768154 17.362242952415407 19.937664009915995 9 27.927471233159018 12.700431493213213 16.228040816234433 43.14405645739334 10 16.9484246398645 26.205935908553823 31.620322074296258 25.22531737728542 11 39.99672074183439 19.425844014112844 18.88942958206757 21.688005661985198 12 23.447448007587422 23.493854023371483 27.509817091102455 25.54888087793864 13 34.08698608346013 18.049232495643324 21.278324028312934 26.58545739258361 14 23.980402671843283 18.67612737661603 22.970526539051377 34.372943412489306 15 27.925515712234567 25.983457797226016 19.39275058308369 26.698275907455727 16 27.496278869317802 24.2707975291241 21.33871953994114 26.89420406161696 17 27.205507950320744 24.311487406821307 22.0631648301066 26.41983981275135 18 27.067192451087536 23.42563642804548 22.52098236345763 26.98618875740936 19 28.357309774821765 23.501676107069283 22.29519490902691 25.845819209082038 20 27.647305254559935 23.135993694197143 22.33107119675624 26.88562985448668 21 27.31035395680856 23.408638438471417 22.5379803530317 26.74302725168833 22 28.036829980241716 23.112076169044254 21.744038857705018 27.10705499300901 23 27.38263301866996 23.03024513959035 22.07835772344271 27.50876411829698 24 27.146240623841262 23.249113058442248 22.097461658627722 27.507184659088775 25 27.424902355575377 22.68990928639281 22.33979582857302 27.545392529458795 26 27.170458998367142 22.892456126759875 22.459233029650964 27.477851845222023 27 27.582923488739585 23.309207720697458 22.192605272836534 26.915263517726423 28 27.290272261161324 23.198419939093046 22.166807439102445 27.34450036064319 29 27.2775613751524 23.53807888120135 22.15379570372053 27.03056403992572 30 27.34231920268899 23.496787304758158 22.12829871935943 27.03259477319342 31 27.18459891889778 22.626730918064425 22.348595672733044 27.84007449030475 32 26.90661409825289 23.292510580496387 22.40237249815542 27.398502823095306 33 27.06328140923863 22.809421699814 22.53279070134758 27.594506189599787 34 27.173768341470055 22.7546671139294 22.80513459624886 27.266429948351682 35 27.113748891558092 23.016030006716463 22.72232580633273 27.147895295392715 36 26.809214113746638 22.515792711773514 22.988051015028176 27.68694215945167 37 26.580493377929237 22.29406672387819 23.285816681947306 27.83962321624526 38 26.276485086520516 22.082419189978104 23.745965797939032 27.895129925562344 39 25.93825517893393 21.872952814032217 24.37052909627105 27.818262910762808 40 26.29792060434622 21.41724122629213 24.940262596375216 27.344575572986436 41 25.881770709154623 21.317434446801933 25.193051282032 27.60774356201145 42 25.195382864672688 21.346992897698428 25.56836087483989 27.889263362788995 43 25.594083496230734 20.238137321192056 25.3141431546614 28.85363602791581 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 23.5 2 27.0 3 63.5 4 100.0 5 100.0 6 115.5 7 131.0 8 135.0 9 139.0 10 192.0 11 245.0 12 245.0 13 505.5 14 766.0 15 1275.0 16 1784.0 17 1376.5 18 969.0 19 969.0 20 1239.0 21 1509.0 22 1478.5 23 1448.0 24 1933.5 25 2419.0 26 2419.0 27 3164.0 28 3909.0 29 4926.0 30 5943.0 31 7772.5 32 9602.0 33 9602.0 34 12133.0 35 14664.0 36 18168.0 37 21672.0 38 27272.0 39 32872.0 40 32872.0 41 41210.0 42 49548.0 43 58524.0 44 67500.0 45 78174.0 46 88848.0 47 88848.0 48 100830.5 49 112813.0 50 121459.0 51 130105.0 52 134204.0 53 138303.0 54 138303.0 55 137325.0 56 136347.0 57 131651.5 58 126956.0 59 118380.5 60 109805.0 61 109805.0 62 97927.5 63 86050.0 64 74954.0 65 63858.0 66 52989.0 67 42120.0 68 42120.0 69 34646.0 70 27172.0 71 22456.0 72 17740.0 73 14872.5 74 12005.0 75 12005.0 76 10079.0 77 8153.0 78 6803.0 79 5453.0 80 4406.5 81 3360.0 82 3360.0 83 2709.5 84 2059.0 85 1674.5 86 1290.0 87 1123.0 88 956.0 89 956.0 90 766.5 91 577.0 92 396.5 93 216.0 94 148.0 95 80.0 96 80.0 97 52.5 98 25.0 99 18.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1329569.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.09954924512064 #Duplication Level Percentage of deduplicated Percentage of total 1 85.1212799315493 57.11599514574692 2 8.097634903963442 10.866953040150056 3 2.5352765477468315 5.103477406966141 4 1.22355224899234 3.2839921754095864 5 0.7329903591402285 2.4591661349664213 6 0.5064744377075386 2.0390523884611067 7 0.3258822538590861 1.530658663865006 8 0.25815326888462536 1.3857574382650233 9 0.18755818839682087 1.1326562908792288 >10 0.9552845032182254 11.074183389686059 >50 0.03860108951947261 1.7433709415654493 >100 0.016975021386442666 2.088683129604761 >500 2.2483042372627924E-4 0.09066698073262312 >1k 1.1241521186313962E-4 0.08538687370160514 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 1.5042468649615026E-4 0.0 0.0 0.0 0.0 12 1.5042468649615026E-4 0.0 0.0 0.0 0.0 13 1.5042468649615026E-4 0.0 0.0 0.0 0.0 14 1.5042468649615026E-4 0.0 0.0 0.0 7.521234324807513E-5 15 1.5042468649615026E-4 0.0 0.0 0.0 7.521234324807513E-5 16 1.5042468649615026E-4 0.0 0.0 1.5042468649615026E-4 7.521234324807513E-5 17 1.5042468649615026E-4 0.0 0.0 1.5042468649615026E-4 7.521234324807513E-5 18 1.5042468649615026E-4 0.0 0.0 2.256370297442254E-4 1.5042468649615026E-4 19 1.5042468649615026E-4 0.0 0.0 2.256370297442254E-4 1.5042468649615026E-4 20 1.5042468649615026E-4 0.0 0.0 4.512740594884508E-4 1.5042468649615026E-4 21 1.5042468649615026E-4 0.0 0.0 7.521234324807512E-4 1.5042468649615026E-4 22 1.5042468649615026E-4 0.0 0.0 0.0015794592082095777 1.5042468649615026E-4 23 1.5042468649615026E-4 0.0 0.0 0.001880308581201878 1.5042468649615026E-4 24 1.5042468649615026E-4 0.0 0.0 0.002406794983938404 1.5042468649615026E-4 25 1.5042468649615026E-4 0.0 0.0 0.0026324320136826293 2.256370297442254E-4 26 1.5042468649615026E-4 0.0 0.0 0.003459767789411456 2.256370297442254E-4 27 1.5042468649615026E-4 0.0 0.0 0.006769110892326761 2.256370297442254E-4 28 1.5042468649615026E-4 0.0 0.0 0.0287311151207647 3.008493729923005E-4 29 1.5042468649615026E-4 0.0 0.0 0.08077805664843268 3.008493729923005E-4 30 1.5042468649615026E-4 0.0 0.0 0.15388445428556172 3.008493729923005E-4 31 1.5042468649615026E-4 0.0 0.0 0.3628995561719625 3.008493729923005E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCAA 90 5.456968E-12 26.722223 20 CGACTAT 45 1.3233644E-4 24.666668 36 ATTACGG 85 1.9772415E-9 23.941175 25 CGTGTTA 40 0.0019313452 23.125002 35 TATACCG 65 2.6833713E-6 22.76923 5 CATACCG 45 0.0038261183 20.555557 5 TTACGGG 65 6.903171E-5 19.923077 26 ATACCGA 75 9.2675655E-6 19.733334 6 CGCGCAT 60 9.237854E-4 18.5 10 CATTACG 110 3.8529834E-8 18.5 24 TATATGA 65 0.0015801102 17.076923 2 GGGGTAA 120 1.04153514E-7 16.958334 36 TCGTTAC 90 4.446799E-5 16.444445 23 TTTATGC 90 4.446799E-5 16.444445 3 TATATAC 80 3.3830633E-4 16.1875 3 TACCGAC 80 3.3830633E-4 16.1875 7 ACCCGTT 115 1.2424771E-6 16.086956 7 TTATGCT 140 3.473906E-8 15.857142 4 TTCTAGG 130 2.5896588E-7 15.653846 2 TACCCGT 95 7.061008E-5 15.578948 6 >>END_MODULE