##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727376.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4832297 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46624410709855 31.0 31.0 34.0 30.0 34.0 2 31.635761626406655 31.0 31.0 34.0 30.0 34.0 3 31.69620120617586 31.0 31.0 34.0 30.0 34.0 4 35.44016830919126 37.0 35.0 37.0 33.0 37.0 5 35.1084674638169 37.0 35.0 37.0 32.0 37.0 6 35.121055473204564 37.0 35.0 37.0 32.0 37.0 7 35.077031896011356 36.0 35.0 37.0 32.0 37.0 8 35.023985487646975 36.0 35.0 37.0 32.0 37.0 9 36.64319887622801 38.0 35.0 39.0 32.0 39.0 10 36.36155993723068 38.0 35.0 39.0 32.0 39.0 11 36.52228743390565 38.0 35.0 39.0 32.0 39.0 12 36.39865761562255 38.0 35.0 39.0 32.0 39.0 13 36.492401439729385 38.0 35.0 39.0 32.0 39.0 14 37.422097606997255 39.0 36.0 40.0 32.0 41.0 15 37.365190094896896 39.0 36.0 40.0 32.0 41.0 16 37.27682652783966 39.0 36.0 40.0 32.0 41.0 17 37.23089040263874 39.0 36.0 40.0 32.0 41.0 18 37.17179345557609 39.0 36.0 40.0 32.0 41.0 19 37.18184002349194 39.0 36.0 40.0 32.0 41.0 20 37.04370406040854 39.0 36.0 40.0 31.0 41.0 21 36.942272174082014 39.0 36.0 40.0 31.0 41.0 22 36.85570526811576 39.0 36.0 40.0 31.0 41.0 23 36.72100742152231 38.0 36.0 40.0 31.0 41.0 24 36.58445228014752 38.0 36.0 40.0 30.0 41.0 25 36.492768139044436 38.0 35.0 40.0 30.0 41.0 26 36.08172821331139 38.0 35.0 40.0 29.0 41.0 27 35.805468082777196 38.0 34.0 40.0 28.0 41.0 28 35.63989196028307 38.0 34.0 40.0 27.0 41.0 29 35.55370996443306 38.0 34.0 40.0 27.0 41.0 30 35.45164856381965 38.0 34.0 40.0 27.0 41.0 31 35.19299227675782 38.0 34.0 40.0 26.0 41.0 32 35.07011530955155 38.0 34.0 40.0 26.0 41.0 33 34.85826988697094 38.0 33.0 40.0 25.0 41.0 34 34.678817961727106 38.0 33.0 40.0 25.0 40.0 35 34.50096134405646 38.0 33.0 40.0 24.0 40.0 36 34.31978063434429 37.0 33.0 40.0 24.0 40.0 37 34.01987129516253 37.0 33.0 39.0 23.0 40.0 38 33.88104642574742 37.0 32.0 39.0 23.0 40.0 39 33.66228027788855 37.0 32.0 39.0 22.0 40.0 40 33.497756656927336 37.0 31.0 39.0 21.0 40.0 41 33.31164309644047 37.0 31.0 39.0 20.0 40.0 42 33.058744319730344 37.0 31.0 39.0 19.0 40.0 43 30.040680239645866 33.0 25.0 38.0 10.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 17.0 11 33.0 12 41.0 13 49.0 14 113.0 15 222.0 16 383.0 17 702.0 18 1399.0 19 2662.0 20 5047.0 21 8797.0 22 14335.0 23 21731.0 24 31543.0 25 43331.0 26 58493.0 27 75840.0 28 97016.0 29 120940.0 30 149612.0 31 182068.0 32 225963.0 33 279969.0 34 357066.0 35 471253.0 36 661345.0 37 916836.0 38 918305.0 39 187177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.1523132787575 20.084361536552905 13.669027379732663 25.094297804956938 2 19.166412991585574 22.859749721509253 33.739565262648384 24.234272024256786 3 19.203517499027896 23.10367098711027 31.295986153168982 26.396825360692855 4 15.2511528161452 16.65733708006772 33.32450385396427 34.767006249822806 5 14.427941825595573 37.775823795598654 33.644744931861595 14.151489446944176 6 35.327671291727306 36.16255375031791 13.961890173555144 14.547884784399635 7 29.24056613242108 31.613412834517412 20.250431627029545 18.895589406031952 8 28.206834141196207 35.171575753725406 18.528331350494394 18.093258754584 9 26.960697986899397 13.76991107955492 18.510741372063844 40.75864956148184 10 15.587411121460457 28.69883618494476 33.355089722341155 22.35866297125363 11 37.10744600342239 21.513247219696968 20.89979154840855 20.479515228472092 12 21.433388717622282 26.130554475438906 29.829789021659884 22.606267785278927 13 32.0928742583496 20.107559613988958 23.631825610056666 24.167740517604773 14 22.052328323362573 21.001565094198472 26.36350787213617 30.582598710302783 15 25.494935431328 28.871693937686366 21.947243722809258 23.68612690817638 16 24.298506486666692 26.686563346582382 24.327022945816452 24.687907220934473 17 24.268810464257474 26.843424565998326 25.394631166089336 23.493133803654867 18 24.012389966924633 25.751169681830397 26.123311543143974 24.113128808100992 19 25.191456568170373 25.800918279650443 26.45925943707516 22.54836571510402 20 24.556975699134387 25.745892688301236 26.075942765935125 23.621188846629256 21 24.212977803309688 26.04817129410713 26.345359153214297 23.393491749368884 22 24.686624187213656 25.82028795001632 25.542490455367293 23.950597407402732 23 24.13022212831703 25.740160424742104 25.815755943808917 24.313861503131946 24 23.9974488323048 25.876472410532713 25.932263683295957 24.193815073866528 25 24.23685878579069 25.548864235786834 26.04719867177038 24.167078306652094 26 23.902359478318488 25.846238341724444 26.206005135859822 24.045397044097246 27 24.315806747805443 26.19189176493084 25.903871388699823 23.588430098563894 28 23.971125946935796 26.266721602583615 25.951654047754104 23.810498402726488 29 23.97458186034509 26.37544836337667 26.0212896682468 23.62868010803144 30 24.038754240478184 26.44733963992693 25.814886791933528 23.699019327661357 31 24.016590867655694 25.638407573044454 26.1266019038151 24.218399655484752 32 23.6223063276119 26.285118650612745 25.850935900670013 24.241639121105347 33 23.856170264369098 25.728219933501606 26.018392495328825 24.397217306800474 34 24.013942023844976 25.767042050602434 26.371226768553342 23.847789156999248 35 23.883507160259395 25.888661230880473 26.257202320138852 23.970629288721284 36 23.654278700170952 25.54294572539726 26.531585289563118 24.271190284868666 37 23.451787007296943 25.398480267251784 26.721412197967137 24.428320527484136 38 23.185143628382114 25.29629283961644 27.142681834332617 24.37588169766883 39 22.991881500661073 25.165940752399944 27.579451345809247 24.26272640112973 40 23.2227034058544 24.903829379692517 27.803485588737615 24.06998162571547 41 22.85670768994538 24.768241687131397 28.061685778005778 24.313364844917437 42 22.425111701536558 24.986274643301105 27.968376115954797 24.620237539207544 43 22.718574624034904 24.207079987012385 27.78192234459099 25.292423044361716 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1283.0 1 1179.0 2 1075.0 3 1903.0 4 2731.0 5 2731.0 6 3523.0 7 4315.0 8 4960.5 9 5606.0 10 8208.0 11 10810.0 12 10810.0 13 19769.5 14 28729.0 15 46230.5 16 63732.0 17 49474.0 18 35216.0 19 35216.0 20 41110.0 21 47004.0 22 42496.5 23 37989.0 24 45170.5 25 52352.0 26 52352.0 27 62326.0 28 72300.0 29 81510.5 30 90721.0 31 103038.5 32 115356.0 33 115356.0 34 129992.5 35 144629.0 36 163472.0 37 182315.0 38 201827.5 39 221340.0 40 221340.0 41 246914.5 42 272489.0 43 294907.0 44 317325.0 45 338468.5 46 359612.0 47 359612.0 48 381115.0 49 402618.0 50 409119.5 51 415621.0 52 410870.0 53 406119.0 54 406119.0 55 384882.5 56 363646.0 57 340307.5 58 316969.0 59 288815.5 60 260662.0 61 260662.0 62 228513.5 63 196365.0 64 167036.5 65 137708.0 66 114086.5 67 90465.0 68 90465.0 69 74859.5 70 59254.0 71 49109.0 72 38964.0 73 32491.0 74 26018.0 75 26018.0 76 22053.5 77 18089.0 78 15148.5 79 12208.0 80 10112.0 81 8016.0 82 8016.0 83 6511.5 84 5007.0 85 4138.5 86 3270.0 87 2826.5 88 2383.0 89 2383.0 90 1788.5 91 1194.0 92 858.5 93 523.0 94 360.5 95 198.0 96 198.0 97 126.0 98 54.0 99 35.5 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4832297.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.60902299815151 #Duplication Level Percentage of deduplicated Percentage of total 1 83.60095395021902 50.6697214063623 2 8.869523819320305 10.751463462956739 3 2.794984057927398 5.0820375913916545 4 1.3541687154702342 3.2829937127725084 5 0.761740703540557 2.3084179909758866 6 0.4910853759498188 1.7858522906999068 7 0.36165355256731874 1.5343627939441071 8 0.25491699504726567 1.236021601235152 9 0.21691111554772113 1.1832093711707876 >10 1.193449112702018 13.208741076253158 >50 0.06790098498641053 2.78807717202363 >100 0.029880962896569836 3.14946732825945 >500 0.0019098393840459187 0.7893353507565827 >1k 7.843974870518057E-4 0.654668024871212 >5k 0.0 0.0 >10k+ 1.364169542682873E-4 1.5756308263268337 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 38149 0.7894589260552486 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15292 0.31645405901168744 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12214 0.25275764300083375 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10572 0.21877794349147 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.06940922712325E-5 2 0.0 0.0 0.0 0.0 4.1388184542465E-5 3 0.0 0.0 0.0 0.0 4.1388184542465E-5 4 0.0 0.0 0.0 0.0 4.1388184542465E-5 5 0.0 2.06940922712325E-5 0.0 0.0 4.1388184542465E-5 6 0.0 2.06940922712325E-5 0.0 0.0 4.1388184542465E-5 7 0.0 2.06940922712325E-5 0.0 0.0 4.1388184542465E-5 8 0.0 2.06940922712325E-5 0.0 0.0 6.20822768136975E-5 9 0.0 2.06940922712325E-5 0.0 0.0 6.20822768136975E-5 10 2.06940922712325E-5 2.06940922712325E-5 0.0 0.0 8.277636908493E-5 11 2.06940922712325E-5 2.06940922712325E-5 0.0 0.0 8.277636908493E-5 12 2.06940922712325E-5 2.06940922712325E-5 0.0 2.06940922712325E-5 8.277636908493E-5 13 2.06940922712325E-5 2.06940922712325E-5 0.0 2.06940922712325E-5 8.277636908493E-5 14 4.1388184542465E-5 2.06940922712325E-5 0.0 2.06940922712325E-5 1.034704613561625E-4 15 4.1388184542465E-5 2.06940922712325E-5 0.0 6.20822768136975E-5 1.034704613561625E-4 16 4.1388184542465E-5 2.06940922712325E-5 0.0 8.277636908493E-5 1.6555273816986E-4 17 4.1388184542465E-5 2.06940922712325E-5 0.0 1.862468304410925E-4 1.6555273816986E-4 18 8.277636908493E-5 2.06940922712325E-5 0.0 1.862468304410925E-4 1.6555273816986E-4 19 8.277636908493E-5 2.06940922712325E-5 0.0 3.3110547633972E-4 1.6555273816986E-4 20 1.034704613561625E-4 2.06940922712325E-5 0.0 6.208227681369751E-4 1.862468304410925E-4 21 1.24164553627395E-4 2.06940922712325E-5 0.0 0.00115886916718902 2.06940922712325E-4 22 1.24164553627395E-4 2.06940922712325E-5 0.0 0.0022142678730218777 2.06940922712325E-4 23 1.24164553627395E-4 2.06940922712325E-5 0.0 0.00264884381071776 3.1041138406848754E-4 24 1.24164553627395E-4 2.06940922712325E-5 0.0 0.0037042425165506178 3.1041138406848754E-4 25 1.24164553627395E-4 2.06940922712325E-5 0.0 0.004014653900619105 3.1041138406848754E-4 26 1.24164553627395E-4 2.06940922712325E-5 0.0 0.005007970329638265 3.3110547633972E-4 27 1.24164553627395E-4 2.06940922712325E-5 0.0 0.008898459676629975 3.3110547633972E-4 28 1.24164553627395E-4 2.06940922712325E-5 0.0 0.032137925297224076 3.3110547633972E-4 29 1.24164553627395E-4 2.06940922712325E-5 0.0 0.08826030353680661 3.3110547633972E-4 30 1.24164553627395E-4 2.06940922712325E-5 0.0 0.15992394507208477 3.3110547633972E-4 31 1.24164553627395E-4 2.06940922712325E-5 0.0 0.41516487914546646 3.3110547633972E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2715 0.0 18.125229 37 AACGCAG 18720 0.0 14.1615925 5 GTACTAT 355 0.0 14.070423 1 TCGTTAC 425 0.0 13.929412 23 TCTTATA 4440 0.0 13.708333 37 TAATACC 395 0.0 13.582278 4 TAGTACT 470 0.0 13.382979 4 TAGACAG 1020 0.0 12.877451 5 ATACCCG 275 3.6379788E-12 12.781817 5 TCTATAC 435 0.0 12.75862 3 CGCAGAG 20730 0.0 12.743849 7 CTCTTAT 6750 0.0 12.634815 37 GAGTACT 11575 0.0 12.562419 11 ACGCAGA 21060 0.0 12.535375 6 AGAGTAC 20950 0.0 12.38043 10 AGTACTT 11835 0.0 12.286439 12 CGTGAAA 830 0.0 12.259036 10 CAGAGTA 21540 0.0 12.204503 9 GGTATCA 12350 0.0 12.163562 1 ACCGCTA 700 0.0 12.157143 8 >>END_MODULE