##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727375.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8616702 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.061694718002315 33.0 31.0 34.0 30.0 34.0 2 32.21361896929939 33.0 31.0 34.0 30.0 34.0 3 32.297659243641014 34.0 31.0 34.0 30.0 34.0 4 35.891826478390456 37.0 35.0 37.0 35.0 37.0 5 35.76958968756259 37.0 35.0 37.0 35.0 37.0 6 35.78550134378559 37.0 35.0 37.0 35.0 37.0 7 35.737517091806126 37.0 35.0 37.0 35.0 37.0 8 35.70752000011141 37.0 35.0 37.0 33.0 37.0 9 37.431295059292985 39.0 37.0 39.0 35.0 39.0 10 37.267624666606785 39.0 37.0 39.0 34.0 39.0 11 37.37577985173446 39.0 37.0 39.0 34.0 39.0 12 37.275377516827206 39.0 37.0 39.0 34.0 39.0 13 37.33592434785374 39.0 37.0 39.0 34.0 39.0 14 38.49667158037959 40.0 38.0 41.0 34.0 41.0 15 38.45569441765539 40.0 38.0 41.0 34.0 41.0 16 38.39330210096624 40.0 38.0 41.0 34.0 41.0 17 38.353191511090905 40.0 38.0 41.0 34.0 41.0 18 38.30632938216965 40.0 38.0 41.0 34.0 41.0 19 38.313735463986106 40.0 38.0 41.0 34.0 41.0 20 38.20021488499892 40.0 38.0 41.0 34.0 41.0 21 38.12407101928325 40.0 38.0 41.0 33.0 41.0 22 38.050809810992654 40.0 38.0 41.0 33.0 41.0 23 37.942477063730415 40.0 37.0 41.0 33.0 41.0 24 37.83379998519155 40.0 37.0 41.0 33.0 41.0 25 37.758845669723755 40.0 37.0 41.0 32.0 41.0 26 37.40312012647066 39.0 37.0 41.0 32.0 41.0 27 37.19726712145784 39.0 36.0 41.0 31.0 41.0 28 37.06241854482144 39.0 36.0 40.0 31.0 41.0 29 37.030232332509584 39.0 36.0 40.0 31.0 41.0 30 36.95950805772325 39.0 36.0 40.0 31.0 41.0 31 36.75408387106807 39.0 36.0 40.0 30.0 41.0 32 36.659994044125 39.0 36.0 40.0 30.0 41.0 33 36.49053442953 39.0 35.0 40.0 30.0 41.0 34 36.362680176243764 39.0 35.0 40.0 30.0 41.0 35 36.21684050347801 39.0 35.0 40.0 29.0 41.0 36 36.08114241388411 39.0 35.0 40.0 29.0 41.0 37 35.84605293301312 38.0 35.0 40.0 27.0 41.0 38 35.75370901767289 38.0 35.0 40.0 27.0 41.0 39 35.599537502863626 38.0 35.0 40.0 26.0 41.0 40 35.47394165424312 38.0 34.0 40.0 26.0 41.0 41 35.35163917703084 38.0 34.0 40.0 26.0 41.0 42 35.16021814378634 38.0 34.0 40.0 25.0 41.0 43 31.780180166379203 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 11.0 10 33.0 11 42.0 12 29.0 13 30.0 14 43.0 15 104.0 16 183.0 17 341.0 18 813.0 19 1726.0 20 3614.0 21 6904.0 22 12488.0 23 20007.0 24 31149.0 25 44635.0 26 61529.0 27 82589.0 28 107988.0 29 138595.0 30 176140.0 31 220518.0 32 275475.0 33 347753.0 34 446742.0 35 591564.0 36 830730.0 37 1303906.0 38 2331573.0 39 1579445.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.21176501171794 18.748785788344545 12.646845626087568 26.39260357384995 2 18.72585358063909 21.21277955301228 34.31374323958285 25.747623626765787 3 18.553502256431752 22.004671857051573 30.782925996512354 28.65889989000432 4 14.770430728601266 15.74746347268363 33.522570468376415 35.95953533033868 5 14.53843941684417 36.96041710621999 34.046576056593345 14.454567420342492 6 36.23862122654352 35.43239629268832 14.073992578599098 14.254989902169065 7 30.31865323879136 30.952515243070955 19.947434644948846 18.78139687318884 8 28.17902951732577 34.928061803692415 18.541084512380724 18.351824166601098 9 26.99737091987166 13.56590955565134 18.047345724617145 41.389373799859854 10 15.597394455558518 27.722335065086384 33.602647509453156 23.07762296990194 11 37.56164481491875 20.89731082727475 21.090458971425495 20.450585386381007 12 21.83066096518134 25.020152722004312 29.819343874257225 23.32984243855712 13 31.953501467266708 19.536070761179857 23.448286827141057 25.062140944412377 14 22.55914153698248 19.950127090387948 25.54469215716175 31.94603921546782 15 25.69814994182229 27.984465518245845 21.37107677624223 24.946307763689635 16 25.17473622738723 26.032198862163273 23.562692547566343 25.230372362883152 17 24.687879423008944 26.192817159047628 24.878671677400472 24.24063174054296 18 24.6858252728248 25.34307209417246 25.2992154074726 24.67188722553014 19 25.576583709173185 25.346495677812698 25.402398736778874 23.674521876235247 20 25.27136252361983 25.171602777953794 25.11863587716043 24.438398821265956 21 24.95986283383132 25.26970295595693 25.23280949022027 24.537624719991477 22 25.48274270132587 24.98772732305237 24.771484496040365 24.7580454795814 23 24.994481647386667 25.00882588257085 24.89155363618238 25.105138833860103 24 24.91852451204649 25.003127646749302 24.960187784142935 25.118160057061274 25 25.089552824270818 24.66594527697488 25.128941444185955 25.115560454568346 26 24.75093138883067 25.018713656338587 25.26218267731668 24.968172277514064 27 25.019131449596376 25.298553901481103 24.994307566862588 24.688007082059933 28 24.901766360261735 25.279114909625516 25.057904984993094 24.761213745119655 29 24.83873760517655 25.581829335632122 25.079084782089485 24.500348277101843 30 24.91392878621078 25.481500926920763 24.898690937669656 24.7058793491988 31 24.89901588798127 24.82922120319352 25.136879516083997 25.134883392741216 32 24.439861097668224 25.29074348863405 25.17899539754305 25.090400016154675 33 24.63918329773967 24.866845807131313 25.20725446928535 25.286716425843668 34 24.8556234160123 24.69189488043105 25.6122934273461 24.84018827621055 35 24.656150346153318 24.779167249836423 25.59933023098629 24.965352173023973 36 24.45859216205922 24.470928668532345 25.893282603947544 25.17719656546089 37 24.212546749324744 24.07677554591072 26.232704809798456 25.47797289496608 38 23.794672253955166 24.08645442304956 26.64220022927565 25.476673093719615 39 23.653388500611953 23.857863484196155 27.213161137521062 25.27558687767083 40 23.77558142314774 23.688448318161637 27.521550588612676 25.01441967007795 41 23.37719234110684 23.563574555555014 27.90050067879799 25.158732424540155 42 22.92692726289014 23.805070663926873 27.90352967991698 25.36447239326601 43 23.019039070864935 22.992044984264282 27.8638277150585 26.125088229812288 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 837.0 1 931.5 2 1026.0 3 2279.0 4 3532.0 5 3532.0 6 4034.0 7 4536.0 8 4903.5 9 5271.0 10 7920.5 11 10570.0 12 10570.0 13 19521.5 14 28473.0 15 46190.0 16 63907.0 17 50242.5 18 36578.0 19 36578.0 20 43488.0 21 50398.0 22 47795.0 23 45192.0 24 55474.5 25 65757.0 26 65757.0 27 80743.0 28 95729.0 29 111564.5 30 127400.0 31 150670.0 32 173940.0 33 173940.0 34 200813.0 35 227686.0 36 262841.0 37 297996.0 38 338941.5 39 379887.0 40 379887.0 41 426569.5 42 473252.0 43 519404.5 44 565557.0 45 610536.5 46 655516.0 47 655516.0 48 697499.5 49 739483.0 50 758495.5 51 777508.0 52 774218.0 53 770928.0 54 770928.0 55 742643.0 56 714358.0 57 669107.5 58 623857.0 59 570475.0 60 517093.0 61 517093.0 62 454079.0 63 391065.0 64 333147.5 65 275230.0 66 227976.0 67 180722.0 68 180722.0 69 147654.5 70 114587.0 71 93839.5 72 73092.0 73 60146.0 74 47200.0 75 47200.0 76 38855.0 77 30510.0 78 25118.0 79 19726.0 80 15989.5 81 12253.0 82 12253.0 83 9682.5 84 7112.0 85 5556.5 86 4001.0 87 3374.5 88 2748.0 89 2748.0 90 2009.5 91 1271.0 92 917.5 93 564.0 94 413.0 95 262.0 96 262.0 97 162.5 98 63.0 99 46.0 100 29.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8616702.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.71530554467432 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34064257150531 43.15522163383878 2 9.882651766256902 10.616993184322096 3 3.557855047915032 5.733338129472535 4 1.688553692315859 3.628047100453374 5 1.0215732788057683 2.7437060403663303 6 0.6469230048474575 2.0849800121556 7 0.4599544565677914 1.7294615919821485 8 0.32889458909279906 1.4133338676087848 9 0.25537672851817045 1.234587510121758 >10 1.6277529148633636 16.541770720609662 >50 0.13572087278199024 5.015034410684089 >100 0.05278126533461182 4.6301813873522795 >500 0.0010386628019300962 0.36179292348233166 >1k 1.9464120499957483E-4 0.17770373934082878 >5k 0.0 0.0 >10k+ 8.650718807681358E-5 0.9338477482094073 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40178 0.46628048643204795 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15443 0.17922170222435452 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12803 0.1485835299862987 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11963 0.1388350206378264 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.1605368271990838E-5 0.0 2 0.0 0.0 0.0 2.3210736543981675E-5 0.0 3 0.0 0.0 0.0 2.3210736543981675E-5 0.0 4 0.0 0.0 0.0 2.3210736543981675E-5 0.0 5 0.0 0.0 0.0 2.3210736543981675E-5 0.0 6 0.0 0.0 0.0 2.3210736543981675E-5 2.3210736543981675E-5 7 0.0 0.0 0.0 2.3210736543981675E-5 4.642147308796335E-5 8 0.0 0.0 0.0 2.3210736543981675E-5 5.802684135995419E-5 9 1.1605368271990838E-5 0.0 0.0 2.3210736543981675E-5 6.963220963194504E-5 10 2.3210736543981675E-5 0.0 0.0 2.3210736543981675E-5 8.123757790393587E-5 11 3.481610481597252E-5 0.0 0.0 2.3210736543981675E-5 8.123757790393587E-5 12 3.481610481597252E-5 0.0 0.0 2.3210736543981675E-5 9.28429461759267E-5 13 3.481610481597252E-5 1.1605368271990838E-5 0.0 2.3210736543981675E-5 9.28429461759267E-5 14 3.481610481597252E-5 1.1605368271990838E-5 0.0 2.3210736543981675E-5 1.2765905099189923E-4 15 3.481610481597252E-5 1.1605368271990838E-5 0.0 5.802684135995419E-5 1.3926441926389007E-4 16 4.642147308796335E-5 1.1605368271990838E-5 0.0 1.6247515580787174E-4 1.9729126062384425E-4 17 4.642147308796335E-5 1.1605368271990838E-5 0.0 3.017395750717618E-4 1.9729126062384425E-4 18 4.642147308796335E-5 1.1605368271990838E-5 0.0 3.4816104815972517E-4 3.1334494334375263E-4 19 4.642147308796335E-5 1.1605368271990838E-5 0.0 4.5260936260764267E-4 3.365556798877343E-4 20 4.642147308796335E-5 1.1605368271990838E-5 0.0 6.150845184155144E-4 3.365556798877343E-4 21 4.642147308796335E-5 1.1605368271990838E-5 0.0 9.516401983032487E-4 3.59766416431716E-4 22 5.802684135995419E-5 1.1605368271990838E-5 0.0 0.0016247515580787174 3.713717847037068E-4 23 5.802684135995419E-5 1.1605368271990838E-5 0.0 0.002019334079326406 4.874254674236152E-4 24 5.802684135995419E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.002669234702557893 4.874254674236152E-4 25 5.802684135995419E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.0030522118555335906 4.990308356956061E-4 26 5.802684135995419E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.0037717446883970226 4.990308356956061E-4 27 5.802684135995419E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.00859957788954521 4.990308356956061E-4 28 6.963220963194504E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.036939887209746836 4.990308356956061E-4 29 6.963220963194504E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.09691643043939549 4.990308356956061E-4 30 6.963220963194504E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.17708631446230821 4.990308356956061E-4 31 6.963220963194504E-5 1.1605368271990838E-5 1.1605368271990838E-5 0.515661328429369 4.990308356956061E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 5325 0.0 19.003756 37 TCTTATA 9285 0.0 15.481421 37 AACGCAG 18240 0.0 14.970394 5 GGTATCA 11535 0.0 14.161681 1 TAGTACT 800 0.0 13.4125 4 TATACCG 415 0.0 13.373494 5 ACGCAGA 20765 0.0 13.150012 6 CTCTTAT 14785 0.0 13.075752 37 CGCAGAG 21050 0.0 12.998337 7 AGAGTAC 21375 0.0 12.774736 10 CAGAGTA 22190 0.0 12.45561 9 TAATACT 1190 0.0 12.436975 4 CAACGCA 22050 0.0 12.375284 4 TCAACGC 22150 0.0 12.336118 3 ATCAACG 22255 0.0 12.311166 2 GCAGAGT 22810 0.0 12.254931 8 TATCAAC 22255 0.0 12.219726 1 GTCTTAG 1305 0.0 12.191571 1 GAGTACT 12455 0.0 12.120434 11 TATACTG 1105 0.0 11.719458 5 >>END_MODULE