##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727373.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6323014 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1072844374534 33.0 31.0 34.0 30.0 34.0 2 32.26069877435033 34.0 31.0 34.0 30.0 34.0 3 32.34661602836875 34.0 31.0 34.0 30.0 34.0 4 35.928501818911045 37.0 35.0 37.0 35.0 37.0 5 35.80940592571834 37.0 35.0 37.0 35.0 37.0 6 35.82173422358388 37.0 35.0 37.0 35.0 37.0 7 35.77300999175393 37.0 35.0 37.0 35.0 37.0 8 35.7430962512498 37.0 35.0 37.0 35.0 37.0 9 37.469137344943405 39.0 37.0 39.0 35.0 39.0 10 37.309487690522275 39.0 37.0 39.0 34.0 39.0 11 37.41123631862906 39.0 37.0 39.0 35.0 39.0 12 37.31602681885569 39.0 37.0 39.0 34.0 39.0 13 37.37605689312091 39.0 37.0 39.0 34.0 39.0 14 38.55950943648077 40.0 38.0 41.0 34.0 41.0 15 38.52262275554032 40.0 38.0 41.0 34.0 41.0 16 38.462718728758155 40.0 38.0 41.0 34.0 41.0 17 38.41568467189856 40.0 38.0 41.0 34.0 41.0 18 38.36525413355087 40.0 38.0 41.0 34.0 41.0 19 38.36775863535966 40.0 38.0 41.0 34.0 41.0 20 38.25420867326879 40.0 38.0 41.0 34.0 41.0 21 38.17909939785046 40.0 38.0 41.0 34.0 41.0 22 38.109309262955925 40.0 38.0 41.0 33.0 41.0 23 38.00381020823297 40.0 37.0 41.0 33.0 41.0 24 37.90282023731088 40.0 37.0 41.0 33.0 41.0 25 37.82331685490495 40.0 37.0 41.0 33.0 41.0 26 37.48006662645378 39.0 37.0 41.0 32.0 41.0 27 37.27613413476548 39.0 37.0 41.0 31.0 41.0 28 37.14202641335287 39.0 36.0 41.0 31.0 41.0 29 37.11674574815112 39.0 36.0 40.0 31.0 41.0 30 37.05382448939699 39.0 36.0 40.0 31.0 41.0 31 36.864482191562445 39.0 36.0 40.0 30.0 41.0 32 36.773212743163306 39.0 36.0 40.0 30.0 41.0 33 36.61078213649377 39.0 36.0 40.0 30.0 41.0 34 36.49855527759388 39.0 36.0 40.0 30.0 41.0 35 36.356250199667436 39.0 35.0 40.0 30.0 41.0 36 36.22211843908617 39.0 35.0 40.0 29.0 41.0 37 36.001901466610704 38.0 35.0 40.0 28.0 41.0 38 35.916916995597354 38.0 35.0 40.0 27.0 41.0 39 35.772305264546304 38.0 35.0 40.0 27.0 41.0 40 35.65658813977005 38.0 35.0 40.0 27.0 41.0 41 35.54946438518086 38.0 35.0 40.0 26.0 41.0 42 35.3693018867268 38.0 34.0 40.0 26.0 41.0 43 31.942863166205232 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 10.0 11 14.0 12 19.0 13 16.0 14 22.0 15 56.0 16 108.0 17 200.0 18 486.0 19 1091.0 20 2331.0 21 4606.0 22 8446.0 23 14026.0 24 21492.0 25 31516.0 26 43197.0 27 57914.0 28 76096.0 29 98125.0 30 124442.0 31 156732.0 32 196804.0 33 247777.0 34 319755.0 35 423914.0 36 592164.0 37 930711.0 38 1726043.0 39 1244894.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.255876706899585 18.691956082969295 12.31948877544791 26.732678434683205 2 18.78148617099377 20.815421253218798 34.309175972091786 26.093916603695643 3 18.486816571970266 21.851746651201466 30.638078612509794 29.023358164318473 4 14.844787628178588 15.619449838320776 33.4781640527761 36.057598480724536 5 14.550798084584345 36.76893645973266 34.19771014266298 14.482555313020026 6 36.580339692431494 35.20561554979951 14.112067441255071 14.101977316513928 7 30.51592167912328 30.831008756267188 19.970112354646062 18.682957209963476 8 28.168639196433855 35.00197848684188 18.509748673654684 18.319633643069587 9 27.151276274257814 13.457253139088415 17.940447387907096 41.451023198746675 10 15.572652535642021 27.608147000781592 33.787510196877626 23.031690266698764 11 37.74870655038879 20.76485992281529 21.02868979888389 20.457743727912035 12 21.828608951364018 24.656374317690897 29.890760956720957 23.624255774224128 13 31.904515789463694 19.49037278740803 23.332717593223737 25.272393829904537 14 22.6642863672293 19.712450423168445 25.16103870717351 32.46222450242875 15 25.741584630367733 27.840646881376507 21.19367440907137 25.22409407918439 16 25.463410329314467 26.00785005378764 23.335263847272834 25.193475769625056 17 24.774688147139955 26.081643975483843 24.608944405310506 24.534723472065696 18 24.83393204569846 25.506554310966255 24.993555288664552 24.66595835467073 19 25.673326043560873 25.36186065695885 25.054839353510843 23.909973945969437 20 25.468044195378976 25.05338435119707 24.78930143124782 24.68927002217613 21 25.08648565383534 25.200387030615463 24.913308748011627 24.79981856753757 22 25.740034736598716 24.82181756991207 24.44036973506622 24.997777958422994 23 25.245840037678235 24.882326687873853 24.549779582964707 25.32205369148321 24 25.125059030392784 24.79534285389847 24.699486668857602 25.38011144685114 25 25.382483733232284 24.447075397903596 24.75020615168652 25.420234717177596 26 25.01243868825848 24.81648783317576 24.92115310831195 25.249920370253808 27 25.24319889217389 25.112153792479347 24.650491047465657 24.99415626788111 28 25.176442753408423 25.13793263782114 24.597620691651166 25.088003917119273 29 25.108721884847956 25.422907493167024 24.73301498304448 24.735355638940543 30 25.352529663859674 25.19730305831997 24.508928811481358 24.941238466338998 31 25.221911575713733 24.70538575432539 24.82618257685338 25.246520093107495 32 24.764771990066762 25.03021502087454 24.855899417587878 25.34911357147082 33 24.878119833357953 24.641950816493527 24.909386567861468 25.570542782287053 34 25.107029653896067 24.453986658894003 25.31137840276805 25.127605284441884 35 24.903202808027945 24.4681887466958 25.330040388966403 25.298568056309854 36 24.7317497636412 24.224618196322197 25.642312352938013 25.40131968709859 37 24.479370123172274 23.779387488308583 26.022969425656818 25.718272962862333 38 24.120079443126333 23.812567867159554 26.377215043332182 25.690137646381935 39 23.93222599222459 23.632147580252074 26.956812051973948 25.47881437554938 40 24.094079184388963 23.4323536212319 27.232455914220655 25.241111280158478 41 23.636512587193387 23.376636521760034 27.553647674985378 25.4332032160612 42 23.22636008713566 23.542744014167926 27.601915795220442 25.628980103475968 43 23.29216731134867 22.78739221516827 27.529750843505962 26.3906896299771 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 383.0 1 435.5 2 488.0 3 1071.5 4 1655.0 5 1655.0 6 1947.0 7 2239.0 8 2413.5 9 2588.0 10 3920.5 11 5253.0 12 5253.0 13 9305.5 14 13358.0 15 21718.0 16 30078.0 17 24539.0 18 19000.0 19 19000.0 20 23256.5 21 27513.0 22 27738.5 23 27964.0 24 34992.5 25 42021.0 26 42021.0 27 52474.0 28 62927.0 29 74550.5 30 86174.0 31 103948.5 32 121723.0 33 121723.0 34 142743.5 35 163764.0 36 190670.0 37 217576.0 38 248228.5 39 278881.0 40 278881.0 41 313312.0 42 347743.0 43 383236.5 44 418730.0 45 454086.0 46 489442.0 47 489442.0 48 522026.0 49 554610.0 50 570446.0 51 586282.0 52 583040.0 53 579798.0 54 579798.0 55 559546.0 56 539294.0 57 502385.0 58 465476.0 59 425637.0 60 385798.0 61 385798.0 62 338296.0 63 290794.0 64 247341.5 65 203889.0 66 169037.5 67 134186.0 68 134186.0 69 109717.5 70 85249.0 71 69189.0 72 53129.0 73 43213.5 74 33298.0 75 33298.0 76 27193.5 77 21089.0 78 17145.0 79 13201.0 80 10514.5 81 7828.0 82 7828.0 83 6160.0 84 4492.0 85 3520.5 86 2549.0 87 2001.0 88 1453.0 89 1453.0 90 1032.0 91 611.0 92 463.5 93 316.0 94 216.0 95 116.0 96 116.0 97 78.5 98 41.0 99 28.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6323014.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.8858640750194 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60408154843363 46.65836908404409 2 10.114804074540379 11.710083476085936 3 3.4758405330623714 6.036060979298743 4 1.6478552936023505 3.8155011016306744 5 0.9563908262058585 2.7680754684173916 6 0.6360930551989477 2.209247767938606 7 0.44469694901718565 1.801916700176925 8 0.33302677512280554 1.542203411048062 9 0.2382415798002824 1.2411737734803332 >10 1.4275900791168463 15.291865260904103 >50 0.0920168475204201 3.6019793084996405 >100 0.028842812277763096 2.569495638053197 >500 3.8288723967850723E-4 0.14574128683882528 >1k 2.7347772305415415E-5 0.02121286236770648 >5k 8.204331690818441E-5 0.2989113934236383 >10k+ 2.7347772302728138E-5 0.28816248779210296 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18203 0.28788485997342406 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7486 0.11839290566176194 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.744572762293425E-5 2 0.0 0.0 0.0 0.0 4.744572762293425E-5 3 0.0 0.0 0.0 0.0 4.744572762293425E-5 4 0.0 0.0 0.0 0.0 4.744572762293425E-5 5 0.0 1.5815242540978085E-5 0.0 0.0 4.744572762293425E-5 6 0.0 1.5815242540978085E-5 0.0 0.0 4.744572762293425E-5 7 0.0 1.5815242540978085E-5 0.0 0.0 4.744572762293425E-5 8 0.0 1.5815242540978085E-5 0.0 0.0 6.326097016391234E-5 9 0.0 1.5815242540978085E-5 0.0 0.0 1.107066977868466E-4 10 0.0 1.5815242540978085E-5 0.0 0.0 1.107066977868466E-4 11 0.0 1.5815242540978085E-5 0.0 0.0 1.107066977868466E-4 12 0.0 1.5815242540978085E-5 0.0 0.0 1.107066977868466E-4 13 0.0 1.5815242540978085E-5 0.0 1.5815242540978085E-5 1.107066977868466E-4 14 1.5815242540978085E-5 3.163048508195617E-5 0.0 1.5815242540978085E-5 2.5304388065564937E-4 15 3.163048508195617E-5 3.163048508195617E-5 0.0 1.5815242540978085E-5 2.5304388065564937E-4 16 3.163048508195617E-5 3.163048508195617E-5 0.0 4.744572762293425E-5 2.688591231966274E-4 17 3.163048508195617E-5 3.163048508195617E-5 0.0 9.48914552458685E-5 2.688591231966274E-4 18 4.744572762293425E-5 3.163048508195617E-5 0.0 1.107066977868466E-4 2.846743657376055E-4 19 4.744572762293425E-5 3.163048508195617E-5 0.0 2.055981530327151E-4 2.846743657376055E-4 20 4.744572762293425E-5 3.163048508195617E-5 0.0 2.846743657376055E-4 2.846743657376055E-4 21 4.744572762293425E-5 3.163048508195617E-5 0.0 5.851639740161891E-4 2.846743657376055E-4 22 4.744572762293425E-5 3.163048508195617E-5 0.0 0.001107066977868466 2.846743657376055E-4 23 6.326097016391234E-5 3.163048508195617E-5 0.0 0.0013917413436060715 4.111963060654302E-4 24 6.326097016391234E-5 3.163048508195617E-5 0.0 0.0018503833772944359 4.111963060654302E-4 25 6.326097016391234E-5 3.163048508195617E-5 0.0 0.002024351045245195 4.111963060654302E-4 26 6.326097016391234E-5 3.163048508195617E-5 0.0 0.0026411455043433402 4.270115486064083E-4 27 6.326097016391234E-5 3.163048508195617E-5 0.0 0.006816369535161554 4.270115486064083E-4 28 6.326097016391234E-5 3.163048508195617E-5 0.0 0.03235798623884116 4.428267911473864E-4 29 6.326097016391234E-5 3.163048508195617E-5 0.0 0.08290350139980712 4.428267911473864E-4 30 9.48914552458685E-5 3.163048508195617E-5 0.0 0.14882143231060377 4.428267911473864E-4 31 9.48914552458685E-5 3.163048508195617E-5 0.0 0.4614255163755766 4.428267911473864E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3650 0.0 19.817808 37 TATACCG 275 0.0 16.818182 5 GGTATCA 5160 0.0 16.456396 1 TCTTATA 6585 0.0 16.29461 37 AACGCAG 9165 0.0 16.007092 5 ACGCAGA 10315 0.0 14.383907 6 CAACGCA 10280 0.0 14.360894 4 TCAACGC 10460 0.0 14.149139 3 ATCAACG 10535 0.0 14.030849 2 CGCAGAG 10580 0.0 14.023629 7 AGAGTAC 10860 0.0 13.730202 10 TATCAAC 10865 0.0 13.536586 1 CAGAGTA 11305 0.0 13.467935 9 TAGTACT 590 0.0 13.169492 4 CTCTTAT 10340 0.0 13.096712 37 TAGACAG 1235 0.0 12.88259 5 ATTAGAC 420 0.0 12.773809 3 GCAGAGT 11985 0.0 12.688359 8 CTAGTAC 445 0.0 12.4719095 3 GTATCAA 6775 0.0 12.342435 2 >>END_MODULE