##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727371.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12065859 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.152925788375285 33.0 31.0 34.0 30.0 34.0 2 32.299106429140274 34.0 31.0 34.0 30.0 34.0 3 32.383877600426125 34.0 31.0 34.0 30.0 34.0 4 35.95915326045166 37.0 35.0 37.0 35.0 37.0 5 35.84115701998507 37.0 35.0 37.0 35.0 37.0 6 35.85289012576726 37.0 35.0 37.0 35.0 37.0 7 35.80229894945731 37.0 35.0 37.0 35.0 37.0 8 35.77026981667861 37.0 35.0 37.0 35.0 37.0 9 37.50352005605237 39.0 37.0 39.0 35.0 39.0 10 37.342054386678974 39.0 37.0 39.0 34.0 39.0 11 37.446329018099746 39.0 37.0 39.0 35.0 39.0 12 37.35258227366987 39.0 37.0 39.0 34.0 39.0 13 37.41303234191614 39.0 37.0 39.0 35.0 39.0 14 38.598485031194215 40.0 38.0 41.0 34.0 41.0 15 38.56121076833402 40.0 38.0 41.0 34.0 41.0 16 38.49992951185655 40.0 38.0 41.0 34.0 41.0 17 38.4563907965442 40.0 38.0 41.0 34.0 41.0 18 38.4059376957745 40.0 38.0 41.0 34.0 41.0 19 38.41038155675447 40.0 38.0 41.0 34.0 41.0 20 38.29823860862289 40.0 38.0 41.0 34.0 41.0 21 38.22249969935833 40.0 38.0 41.0 34.0 41.0 22 38.15397751622989 40.0 38.0 41.0 33.0 41.0 23 38.04680843692935 40.0 38.0 41.0 33.0 41.0 24 37.94397323887176 40.0 37.0 41.0 33.0 41.0 25 37.86436340752863 40.0 37.0 41.0 33.0 41.0 26 37.51811114318508 40.0 37.0 41.0 32.0 41.0 27 37.31901591092686 39.0 37.0 41.0 31.0 41.0 28 37.17703969522601 39.0 37.0 41.0 31.0 41.0 29 37.148118173766164 39.0 37.0 40.0 31.0 41.0 30 37.07976522848477 39.0 36.0 40.0 31.0 41.0 31 36.884049697580586 39.0 36.0 40.0 30.0 41.0 32 36.79125050276155 39.0 36.0 40.0 30.0 41.0 33 36.62787448452696 39.0 36.0 40.0 30.0 41.0 34 36.503928646936785 39.0 36.0 40.0 30.0 41.0 35 36.363292576185415 39.0 35.0 40.0 30.0 41.0 36 36.22382111377234 39.0 35.0 40.0 29.0 41.0 37 36.00413265230432 39.0 35.0 40.0 28.0 41.0 38 35.91393136617957 38.0 35.0 40.0 27.0 41.0 39 35.76547421944844 38.0 35.0 40.0 27.0 41.0 40 35.64600406817285 38.0 35.0 40.0 27.0 41.0 41 35.52472550856098 38.0 35.0 40.0 26.0 41.0 42 35.34403708844932 38.0 34.0 40.0 26.0 41.0 43 31.91888443251326 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 16.0 11 22.0 12 25.0 13 35.0 14 49.0 15 101.0 16 224.0 17 491.0 18 981.0 19 2237.0 20 4612.0 21 9007.0 22 16199.0 23 26733.0 24 40960.0 25 58796.0 26 81282.0 27 108781.0 28 142249.0 29 182853.0 30 233899.0 31 294326.0 32 371454.0 33 467107.0 34 604708.0 35 802403.0 36 1130329.0 37 1779363.0 38 3281647.0 39 2424964.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.4442304522206 18.563875145565685 12.448405041033547 26.543489361180168 2 18.62014963045731 20.874899996759453 34.68567799441383 25.819272378369412 3 18.340617108156163 21.82190260966915 30.794442401490024 29.043037880684665 4 14.72748852775422 15.511850420264317 33.62867078091995 36.13199027106152 5 14.484588291641732 36.93321793334399 34.202256134436844 14.379937640577435 6 36.5586818145314 35.3373265840418 14.045473264688408 14.058518336738397 7 30.69290798110603 30.961898361318497 19.85711087789108 18.488082779684397 8 28.22920440227256 35.298854395696154 18.45070458721588 18.021236614815408 9 27.338683470443335 13.527532519649036 17.801360019207916 41.33242399069971 10 15.565041825865858 27.64423983406403 33.627336437463754 23.163381902606353 11 37.85885447525949 20.78418121743342 21.017691322267236 20.339272985039855 12 21.90149909757772 24.714377981708555 29.84740663719011 23.536716283523617 13 31.960418234623827 19.386584908708116 23.40735955890086 25.2456372977672 14 22.653206870725075 19.64384798463168 25.324877408230943 32.378067736412305 15 25.793505460324045 27.82698687262962 21.228169498748496 25.151338168297837 16 25.37496915884729 26.031126337544634 23.408006011010073 25.185898492597996 17 24.903556389976046 26.07307942186296 24.603602611301856 24.419761576859138 18 24.89989316135718 25.470486601907083 24.99365358073553 24.635966656000207 19 25.782225699803057 25.338486053914604 25.093488992370954 23.78579925391139 20 25.427240613370337 25.103111183381145 24.809605350103958 24.660042853144564 21 25.085416628853363 25.279053899104902 25.017083325770674 24.61844614627106 22 25.78081676571888 24.85603387210144 24.429566100515512 24.93358326166417 23 25.170524535385336 24.980865431959714 24.643790384091176 25.20481964856377 24 25.08947767415482 24.824059356238127 24.753380592297656 25.333082377309395 25 25.303262701810127 24.487299246576644 24.797505092675127 25.41193295893811 26 24.89314685344823 24.862747028620173 25.083651317324364 25.160454800607233 27 25.256278894026522 25.21609940908476 24.618595327527032 24.909026369361683 28 25.099738029426668 25.303146671944365 24.638055193583813 24.959060105045154 29 25.099365076286734 25.536888836509693 24.752941336377294 24.61080475082628 30 25.323882866524468 25.32090752925258 24.440124818299303 24.915084785923653 31 25.091930877030805 24.836640308825093 24.816542278506653 25.254886535637453 32 24.675209614168374 25.155523531312607 24.882016274183215 25.287250580335808 33 24.82685236086382 24.73040667887798 24.956698068492265 25.48604289176593 34 25.041383294798987 24.537739086790257 25.470635783163054 24.950241835247702 35 24.84114061004691 24.502300250649373 25.41978155057174 25.236777588731975 36 24.62956014984097 24.190420259344982 25.774451698797407 25.405567892016638 37 24.277484097899702 23.842736766607334 26.135238278517924 25.74454085697504 38 24.01036677123444 23.75787749550198 26.503135831439767 25.72861990182382 39 23.720847392630727 23.555264486349458 27.180518187722896 25.543369933296916 40 23.916490321990334 23.38675596988163 27.469880097223083 25.22687361090495 41 23.388778204684805 23.373155612045522 27.868641594436006 25.369424588833667 42 22.939477413087623 23.579962272060364 27.91173840171678 25.56882191313524 43 22.952505909442504 22.748616571766668 27.85388093794234 26.44499658084849 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 820.0 1 1001.0 2 1182.0 3 2630.0 4 4078.0 5 4078.0 6 4842.0 7 5606.0 8 6078.5 9 6551.0 10 9924.5 11 13298.0 12 13298.0 13 22776.0 14 32254.0 15 52013.5 16 71773.0 17 58296.0 18 44819.0 19 44819.0 20 53246.0 21 61673.0 22 59919.0 23 58165.0 24 71485.5 25 84806.0 26 84806.0 27 104201.5 28 123597.0 29 145540.5 30 167484.0 31 200446.0 32 233408.0 33 233408.0 34 272084.0 35 310760.0 36 361380.5 37 412001.0 38 469890.5 39 527780.0 40 527780.0 41 590814.5 42 653849.0 43 722069.0 44 790289.0 45 858351.5 46 926414.0 47 926414.0 48 987520.0 49 1048626.0 50 1078682.0 51 1108738.0 52 1104060.0 53 1099382.0 54 1099382.0 55 1057207.5 56 1015033.0 57 949370.0 58 883707.0 59 807646.0 60 731585.0 61 731585.0 62 641696.0 63 551807.0 64 472170.5 65 392534.0 66 326086.0 67 259638.0 68 259638.0 69 212153.0 70 164668.0 71 135313.0 72 105958.0 73 86380.5 74 66803.0 75 66803.0 76 54846.0 77 42889.0 78 34910.0 79 26931.0 80 21531.5 81 16132.0 82 16132.0 83 12775.5 84 9419.0 85 7406.5 86 5394.0 87 4357.0 88 3320.0 89 3320.0 90 2448.0 91 1576.0 92 1134.0 93 692.0 94 487.0 95 282.0 96 282.0 97 188.0 98 94.0 99 69.0 100 44.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.2065859E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.4996788016144 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77269935063556 40.56768714893871 2 10.593873039894525 10.911621176393007 3 3.6733619295320605 5.675308784789388 4 1.8791232752380391 3.870969804135867 5 1.1688942026372102 3.0098837994442755 6 0.745943252947662 2.3049502758621596 7 0.5210249563372158 1.8782832529294247 8 0.38481952353252985 1.5854465486812463 9 0.2944721800816323 1.3648700421193696 >10 1.7560299933597472 16.89726508629864 >50 0.1462257410041047 5.172471634443033 >100 0.062011197716104555 5.4129394591269095 >500 0.0011826264064140988 0.4013243758234427 >1k 2.7421137625966124E-4 0.2259891938116528 >5k 0.0 0.0 >10k+ 6.451930099254756E-5 0.7209894172027608 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 43405 0.35973402308115815 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16945 0.1404375768024473 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13644 0.1130793920267094 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12801 0.10609273653869153 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.315139021598048E-5 2 0.0 0.0 0.0 0.0 3.315139021598048E-5 3 0.0 0.0 0.0 8.28784755399512E-6 3.315139021598048E-5 4 0.0 0.0 0.0 8.28784755399512E-6 4.14392377699756E-5 5 0.0 8.28784755399512E-6 0.0 8.28784755399512E-6 4.9727085323970715E-5 6 8.28784755399512E-6 8.28784755399512E-6 0.0 8.28784755399512E-6 9.116632309394632E-5 7 8.28784755399512E-6 8.28784755399512E-6 0.0 1.657569510799024E-5 1.0774201820193655E-4 8 8.28784755399512E-6 8.28784755399512E-6 0.0 1.657569510799024E-5 1.4089340841791703E-4 9 1.657569510799024E-5 8.28784755399512E-6 0.0 3.315139021598048E-5 2.154840364038731E-4 10 2.4863542661985357E-5 8.28784755399512E-6 0.0 4.14392377699756E-5 2.154840364038731E-4 11 2.4863542661985357E-5 8.28784755399512E-6 0.0 4.14392377699756E-5 2.154840364038731E-4 12 2.4863542661985357E-5 8.28784755399512E-6 0.0 7.459062798595607E-5 2.154840364038731E-4 13 2.4863542661985357E-5 8.28784755399512E-6 0.0 8.28784755399512E-5 2.154840364038731E-4 14 3.315139021598048E-5 8.28784755399512E-6 0.0 9.116632309394632E-5 2.900746643898292E-4 15 3.315139021598048E-5 1.657569510799024E-5 0.0 1.3260556086392192E-4 2.983625119438243E-4 16 3.315139021598048E-5 1.657569510799024E-5 0.0 1.740447986338975E-4 3.5637744482179014E-4 17 3.315139021598048E-5 1.657569510799024E-5 0.0 3.1493820705181456E-4 3.5637744482179014E-4 18 3.315139021598048E-5 1.657569510799024E-5 0.0 3.7295313992978036E-4 3.646652923757853E-4 19 4.9727085323970715E-5 1.657569510799024E-5 0.0 5.221343959016926E-4 3.646652923757853E-4 20 6.630278043196096E-5 1.657569510799024E-5 0.0 7.459062798595607E-4 3.646652923757853E-4 21 7.459062798595607E-5 1.657569510799024E-5 0.0 0.0012514649806532631 3.812409874837755E-4 22 7.459062798595607E-5 1.657569510799024E-5 0.0 0.0019890834129588286 3.8952883503777063E-4 23 7.459062798595607E-5 1.657569510799024E-5 0.0 0.0023951879431045897 4.7240731057772184E-4 24 7.459062798595607E-5 1.657569510799024E-5 0.0 0.002975337271884248 4.7240731057772184E-4 25 7.459062798595607E-5 2.4863542661985357E-5 0.0 0.003389729649584004 4.88983005685712E-4 26 7.459062798595607E-5 2.4863542661985357E-5 0.0 0.004036181758795623 4.972708532397071E-4 27 7.459062798595607E-5 2.4863542661985357E-5 0.0 0.009091768766732646 5.055587007937023E-4 28 7.459062798595607E-5 2.4863542661985357E-5 0.0 0.041372934989543635 5.055587007937023E-4 29 7.459062798595607E-5 2.4863542661985357E-5 0.0 0.1068137792758891 5.055587007937023E-4 30 8.28784755399512E-5 3.315139021598048E-5 0.0 0.19381960289772987 5.055587007937023E-4 31 8.28784755399512E-5 3.315139021598048E-5 0.0 0.602990636638469 5.055587007937023E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 8395 0.0 21.50804 37 TCTTATA 15265 0.0 16.130692 37 AACGCAG 20535 0.0 15.531531 5 TATACCG 465 0.0 15.118279 5 GGTATCA 12850 0.0 15.102333 1 TATACTG 1545 0.0 13.889967 5 ACGCAGA 23330 0.0 13.631162 6 CGCAGAG 23735 0.0 13.453128 7 AGAGTAC 23665 0.0 13.367844 10 CAGAGTA 24520 0.0 13.188417 9 CTCTTAT 23870 0.0 13.113532 37 TCAACGC 24830 0.0 12.882199 3 CAACGCA 24790 0.0 12.873135 4 ATCAACG 24815 0.0 12.860166 2 GCAGAGT 25685 0.0 12.676661 8 TATCAAC 25085 0.0 12.655373 1 GTATTAG 950 0.0 12.463158 1 GAGTACT 13345 0.0 12.351816 11 TAGATCG 400 0.0 12.025001 5 CTATACT 1370 0.0 11.883212 4 >>END_MODULE