##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727368.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11037368 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.92058025065396 31.0 31.0 34.0 30.0 34.0 2 32.076041588900544 33.0 31.0 34.0 30.0 34.0 3 32.15905621702565 34.0 31.0 34.0 30.0 34.0 4 35.798681261692096 37.0 35.0 37.0 35.0 37.0 5 35.63912682806263 37.0 35.0 37.0 33.0 37.0 6 35.647241624996106 37.0 35.0 37.0 33.0 37.0 7 35.593706669923485 37.0 35.0 37.0 33.0 37.0 8 35.551171982305924 37.0 35.0 37.0 33.0 37.0 9 37.255586295573366 39.0 37.0 39.0 34.0 39.0 10 37.04973404891456 39.0 37.0 39.0 33.0 39.0 11 37.17232813112691 39.0 37.0 39.0 34.0 39.0 12 37.05316575473428 39.0 37.0 39.0 33.0 39.0 13 37.12130428196287 39.0 37.0 39.0 33.0 39.0 14 38.25959359151566 40.0 38.0 41.0 34.0 41.0 15 38.202036844291136 40.0 38.0 41.0 33.0 41.0 16 38.131399261128195 40.0 38.0 41.0 33.0 41.0 17 38.06142605737165 40.0 37.0 41.0 33.0 41.0 18 37.99184071782331 40.0 37.0 41.0 33.0 41.0 19 37.98181921632041 40.0 37.0 41.0 33.0 41.0 20 37.853009974841825 40.0 37.0 41.0 33.0 41.0 21 37.7590036863861 40.0 37.0 41.0 32.0 41.0 22 37.67832086417704 39.0 37.0 41.0 32.0 41.0 23 37.558188147754066 39.0 37.0 40.0 32.0 41.0 24 37.43328590656758 39.0 37.0 41.0 32.0 41.0 25 37.3435296349637 39.0 37.0 40.0 32.0 41.0 26 36.953299192343685 39.0 36.0 40.0 31.0 41.0 27 36.72111566815567 39.0 36.0 40.0 30.0 41.0 28 36.56684736795946 39.0 36.0 40.0 30.0 41.0 29 36.53493930799444 39.0 36.0 40.0 30.0 41.0 30 36.46454109349258 39.0 36.0 40.0 30.0 41.0 31 36.25771143990125 39.0 35.0 40.0 29.0 41.0 32 36.1590701696274 38.0 35.0 40.0 29.0 41.0 33 35.98193826644178 38.0 35.0 40.0 28.0 41.0 34 35.84365928543834 38.0 35.0 40.0 27.0 41.0 35 35.688037582873015 38.0 35.0 40.0 27.0 41.0 36 35.542879878608744 38.0 34.0 40.0 26.0 41.0 37 35.29048048411541 38.0 34.0 40.0 25.0 41.0 38 35.1936791452455 38.0 34.0 40.0 25.0 41.0 39 35.02773269859264 38.0 34.0 40.0 25.0 41.0 40 34.90554994632778 38.0 33.0 40.0 24.0 41.0 41 34.786330309907214 38.0 33.0 40.0 24.0 41.0 42 34.59945858469157 38.0 33.0 40.0 24.0 41.0 43 31.064911217964283 35.0 27.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 10.0 11 20.0 12 13.0 13 39.0 14 64.0 15 164.0 16 299.0 17 699.0 18 1397.0 19 3047.0 20 6433.0 21 12196.0 22 21599.0 23 34931.0 24 51542.0 25 72348.0 26 97630.0 27 128545.0 28 165615.0 29 208287.0 30 259963.0 31 323030.0 32 398370.0 33 493289.0 34 628105.0 35 822308.0 36 1146773.0 37 1768435.0 38 2963186.0 39 1429027.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76518641038334 18.092012516027374 11.79308327854974 27.349717795039542 2 19.398338444455234 20.256350970629956 33.50546072215768 26.839849862757138 3 18.78774903582086 21.150558720158646 29.923746313432698 30.1379459305878 4 15.235117647613091 15.232689532504489 32.78002509293883 36.7521677269436 5 14.90856334589913 36.46128316098548 33.893542373507884 14.7366111196075 6 37.88718469838099 34.706498868208435 13.460437307155113 13.945879126255461 7 31.861826116516184 30.412766884278934 18.9581338594491 18.767273139755783 8 28.97187989020571 34.63265880054013 17.843194138312686 18.552267170941477 9 27.72499748128358 12.966234341375587 16.649449397718733 42.6593187796221 10 15.704033787765345 27.07199759942769 33.216904609867136 24.00706400293983 11 39.38158082615348 19.893492723989993 20.18626179719658 20.538664652659946 12 22.800879702479797 23.84270416642808 28.887484769919787 24.468931361172338 13 32.80588270681923 18.660218631833242 22.437831193088787 26.096067468258738 14 23.43180004508321 18.677949308204635 23.86567159851878 34.024579048193374 15 26.680409677379608 26.809018236956494 20.124426403106245 26.386145682557654 16 26.690656685543146 25.141011878918963 22.12475836630617 26.043573069231723 17 26.052388576696906 25.10486195622 23.31715314738079 25.525596319702302 18 26.125458533230024 24.563664090931823 23.51476366467078 25.796113711167372 19 26.898713533878727 24.489615640250463 23.517744447770518 25.093926378100285 20 26.73429027644997 24.220049562540634 23.223688835961617 25.821971325047784 21 26.47643894812604 24.261481541613904 23.2954178931064 25.96666161715365 22 27.037206696379062 24.01023504879062 22.88705060844216 26.06550764638816 23 26.608925243771886 23.91889080802597 23.009063392649406 26.463120555552738 24 26.46156221302035 23.797503172857876 23.142129536679395 26.59880507744238 25 26.63099572289336 23.383246803042173 23.296178944110586 26.689578529953877 26 26.282416242712937 23.704401266678797 23.386961456753095 26.626221033855174 27 26.5254814372412 24.063164334105743 23.094536668524597 26.316817560128463 28 26.542586964573438 24.110594119902498 23.082749438090673 26.264069477433388 29 26.44664017725965 24.38741736254513 23.099864025553916 26.066078434641305 30 26.633931205338087 24.247574240525456 22.88588185154287 26.23261270259359 31 26.477091277558202 23.75504739898135 23.160503482351952 26.6073578411085 32 26.08003103638476 24.13777451290924 23.247761604034586 26.534432846671418 33 26.14332511156645 23.814219114557023 23.345855642395904 26.69660013148062 34 26.368813651950358 23.60201272622241 23.680935527382978 26.348238094444255 35 26.195882931510482 23.659263694025604 23.716632443531825 26.428220930932085 36 26.06390400320076 23.440117245343274 23.90113295126157 26.594845800194395 37 25.899063979745897 23.050051425303568 24.207365379137492 26.843519215813043 38 25.49592439066995 23.124208597556954 24.49689092544527 26.882976086327826 39 25.35869964650993 22.89295781385562 25.029372944709284 26.71896959492517 40 25.526592934112553 22.5855113284254 25.39961519811607 26.488280539345975 41 25.09580182521775 22.511027991455933 25.706581496603174 26.68658868672314 42 24.655751262438656 22.488676648273394 25.9506976663277 26.904874422960255 43 24.82667969392703 21.510961671296997 25.955834760605974 27.706523874170003 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 76.0 1 108.0 2 140.0 3 363.0 4 586.0 5 586.0 6 664.0 7 742.0 8 840.5 9 939.0 10 1411.5 11 1884.0 12 1884.0 13 3327.5 14 4771.0 15 7979.0 16 11187.0 17 9959.0 18 8731.0 19 8731.0 20 11500.0 21 14269.0 22 16776.5 23 19284.0 24 25929.5 25 32575.0 26 32575.0 27 43194.5 28 53814.0 29 68572.5 30 83331.0 31 107400.0 32 131469.0 33 131469.0 34 164058.0 35 196647.0 36 241231.0 37 285815.0 38 343433.0 39 401051.0 40 401051.0 41 466991.0 42 532931.0 43 606390.0 44 679849.0 45 759231.0 46 838613.0 47 838613.0 48 909770.0 49 980927.0 50 1026207.5 51 1071488.0 52 1080160.5 53 1088833.0 54 1088833.0 55 1067412.0 56 1045991.0 57 989352.0 58 932713.0 59 862015.5 60 791318.0 61 791318.0 62 700395.0 63 609472.0 64 521859.5 65 434247.0 66 361340.5 67 288434.0 68 288434.0 69 236814.0 70 185194.0 71 151820.0 72 118446.0 73 96308.5 74 74171.0 75 74171.0 76 60655.0 77 47139.0 78 38577.5 79 30016.0 80 23962.0 81 17908.0 82 17908.0 83 14151.5 84 10395.0 85 8113.5 86 5832.0 87 4609.5 88 3387.0 89 3387.0 90 2530.0 91 1673.0 92 1178.5 93 684.0 94 474.5 95 265.0 96 265.0 97 183.0 98 101.0 99 65.5 100 30.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.1037368E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.13435979326435 #Duplication Level Percentage of deduplicated Percentage of total 1 78.76746632078967 40.27723962851091 2 10.294481500120915 10.528034418245733 3 3.773313565057413 5.788379203453523 4 1.9428041304358694 3.9737618165419137 5 1.1549284292411268 2.9528262918142714 6 0.7345859904386095 2.2537550600507585 7 0.5264017040389731 1.8842049891081414 8 0.4042130231719403 1.6535339327997678 9 0.31246473686885173 1.4379915849983584 >10 1.8669304109753866 17.922671515641365 >50 0.15561329106165217 5.4914603242762805 >100 0.06596188852435664 5.447364299640847 >500 6.932420048349013E-4 0.22419406230649214 >1k 1.2404649909786175E-4 0.10725137606961067 >5k 1.772077131476196E-5 0.057331496542041616 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.4360786013477126E-5 2 0.0 0.0 0.0 0.0 5.4360786013477126E-5 3 0.0 0.0 0.0 0.0 5.4360786013477126E-5 4 0.0 0.0 0.0 0.0 6.342091701572331E-5 5 0.0 1.8120262004492374E-5 0.0 0.0 6.342091701572331E-5 6 0.0 1.8120262004492374E-5 0.0 0.0 1.1778170302920044E-4 7 9.060131002246187E-6 1.8120262004492374E-5 0.0 0.0 1.1778170302920044E-4 8 9.060131002246187E-6 1.8120262004492374E-5 0.0 0.0 1.2684183403144662E-4 9 9.060131002246187E-6 1.8120262004492374E-5 0.0 9.060131002246187E-6 2.174431440539085E-4 10 9.060131002246187E-6 1.8120262004492374E-5 0.0 2.7180393006738563E-5 2.174431440539085E-4 11 1.8120262004492374E-5 1.8120262004492374E-5 0.0 3.624052400898475E-5 2.265032750561547E-4 12 1.8120262004492374E-5 1.8120262004492374E-5 0.0 3.624052400898475E-5 2.3556340605840087E-4 13 1.8120262004492374E-5 1.8120262004492374E-5 0.0 3.624052400898475E-5 2.3556340605840087E-4 14 1.8120262004492374E-5 1.8120262004492374E-5 0.0 3.624052400898475E-5 2.808640610696318E-4 15 1.8120262004492374E-5 1.8120262004492374E-5 0.0 4.530065501123094E-5 3.0804445407637036E-4 16 1.8120262004492374E-5 1.8120262004492374E-5 0.0 5.4360786013477126E-5 3.9864576409883226E-4 17 1.8120262004492374E-5 2.7180393006738563E-5 0.0 9.966144102470807E-5 4.1676602610332463E-4 18 1.8120262004492374E-5 2.7180393006738563E-5 0.0 1.2684183403144662E-4 4.530065501123094E-4 19 1.8120262004492374E-5 2.7180393006738563E-5 0.0 1.630823580404314E-4 4.530065501123094E-4 20 1.8120262004492374E-5 2.7180393006738563E-5 0.0 2.174431440539085E-4 4.530065501123094E-4 21 1.8120262004492374E-5 2.7180393006738563E-5 0.0 3.3522484708310897E-4 4.8018694311904793E-4 22 1.8120262004492374E-5 2.7180393006738563E-5 0.0 5.617281221392636E-4 5.164274671280327E-4 23 1.8120262004492374E-5 2.7180393006738563E-5 0.0 6.523294321617256E-4 6.704496941662179E-4 24 1.8120262004492374E-5 2.7180393006738563E-5 0.0 8.878928382201264E-4 6.704496941662179E-4 25 1.8120262004492374E-5 2.7180393006738563E-5 0.0 9.784941482425882E-4 6.885699561707103E-4 26 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.001250298078309974 7.066902181752027E-4 27 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.003578751745887244 7.157503491774488E-4 28 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.02115540589024485 7.24810480179695E-4 29 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.05701540439713526 7.24810480179695E-4 30 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.1062209758703343 7.24810480179695E-4 31 1.8120262004492374E-5 2.7180393006738563E-5 0.0 0.3131271875686305 7.24810480179695E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4385 0.0 19.660204 37 GGTATCA 4805 0.0 18.51925 1 TCTTATA 7920 0.0 16.958334 37 AACGCAG 10305 0.0 14.685103 5 TCAACGC 10335 0.0 14.588775 3 CAACGCA 10450 0.0 14.37512 4 TATACTG 1240 0.0 14.173388 5 ATCAACG 10670 0.0 14.165418 2 GTATCAA 6465 0.0 13.764114 2 ACGCAGA 11000 0.0 13.723636 6 TATCAAC 10960 0.0 13.571169 1 AGAGTAC 11265 0.0 13.466489 10 TAGACAG 2205 0.0 13.340137 5 TTAGACA 1650 0.0 13.230304 4 GTCTTAG 1630 0.0 13.165644 1 TTATACT 1195 0.0 13.004185 4 CAGAGTA 11895 0.0 12.955442 9 CTCTTAT 12980 0.0 12.927196 37 CGCAGAG 11845 0.0 12.900803 7 GTATAAG 1145 0.0 12.279475 1 >>END_MODULE