##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727364.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 936950 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09028443353434 33.0 31.0 34.0 30.0 34.0 2 32.23798388387854 33.0 31.0 34.0 30.0 34.0 3 32.319690485084585 34.0 31.0 34.0 30.0 34.0 4 35.89170393297401 37.0 35.0 37.0 35.0 37.0 5 35.78352099898607 37.0 35.0 37.0 35.0 37.0 6 35.813420139815356 37.0 35.0 37.0 35.0 37.0 7 35.75820908266183 37.0 35.0 37.0 35.0 37.0 8 35.74620310582208 37.0 35.0 37.0 35.0 37.0 9 37.46073429745451 39.0 37.0 39.0 35.0 39.0 10 37.30622658626394 39.0 37.0 39.0 34.0 39.0 11 37.422241314904745 39.0 37.0 39.0 35.0 39.0 12 37.33044025828486 39.0 37.0 39.0 34.0 39.0 13 37.39385666257538 39.0 37.0 39.0 34.0 39.0 14 38.545611825604354 40.0 38.0 41.0 34.0 41.0 15 38.52373232296281 40.0 38.0 41.0 34.0 41.0 16 38.46512514008218 40.0 38.0 41.0 34.0 41.0 17 38.44270985644912 40.0 38.0 41.0 34.0 41.0 18 38.39912908906558 40.0 38.0 41.0 34.0 41.0 19 38.42620630770052 40.0 38.0 41.0 34.0 41.0 20 38.31876941138801 40.0 38.0 41.0 34.0 41.0 21 38.25238806766637 40.0 38.0 41.0 34.0 41.0 22 38.18820214525855 40.0 38.0 41.0 34.0 41.0 23 38.08738993542878 40.0 38.0 41.0 33.0 41.0 24 37.99401782378996 40.0 37.0 41.0 33.0 41.0 25 37.91979828165857 40.0 37.0 41.0 33.0 41.0 26 37.58513474571749 40.0 37.0 41.0 32.0 41.0 27 37.38852019851646 39.0 37.0 41.0 32.0 41.0 28 37.241503815571804 39.0 36.0 41.0 31.0 41.0 29 37.200386359997864 39.0 36.0 40.0 31.0 41.0 30 37.12555419179252 39.0 36.0 40.0 31.0 41.0 31 36.909843641603075 39.0 36.0 40.0 31.0 41.0 32 36.81265062169806 39.0 36.0 40.0 30.0 41.0 33 36.64624686482737 39.0 35.0 40.0 30.0 41.0 34 36.51951651635626 39.0 35.0 40.0 30.0 41.0 35 36.36805058967928 39.0 35.0 40.0 30.0 41.0 36 36.22042691712471 39.0 35.0 40.0 30.0 41.0 37 35.995341266876565 38.0 35.0 40.0 28.0 41.0 38 35.898978600779124 38.0 35.0 40.0 28.0 41.0 39 35.738734190725225 38.0 35.0 40.0 27.0 41.0 40 35.60217941192166 38.0 35.0 40.0 27.0 41.0 41 35.456116121457924 38.0 35.0 40.0 26.0 41.0 42 35.25116068093281 38.0 34.0 40.0 25.0 41.0 43 32.029573616521695 35.0 30.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 4.0 13 7.0 14 2.0 15 7.0 16 10.0 17 32.0 18 56.0 19 119.0 20 309.0 21 607.0 22 1075.0 23 1884.0 24 2924.0 25 4222.0 26 5902.0 27 8253.0 28 11109.0 29 14199.0 30 18097.0 31 22921.0 32 29177.0 33 36863.0 34 47869.0 35 63528.0 36 89850.0 37 143281.0 38 255054.0 39 179586.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.25844495437323 20.392443566892577 13.899461017130049 24.44965046160414 2 18.315171567319492 22.56214312396606 35.17231442446235 23.950370884252095 3 18.37878221890176 22.998986071828806 32.09851112652756 26.523720582741877 4 14.522012914243025 16.292651688990876 34.52649554405251 34.65883985271359 5 13.857409680345803 38.358610384759054 34.2910507497732 13.492929185121938 6 35.004856182293615 36.57591120123806 14.38902822989487 14.030204386573455 7 28.904317199423662 32.26276749026095 20.736858957254924 18.09605635306046 8 27.714819360691607 36.050909867122044 19.106569187256525 17.127701584929824 9 26.91947275735098 14.002881690591815 19.045413309141363 40.032232242915846 10 15.223971396552644 28.98489780671327 34.186989700624366 21.604141096109718 11 36.49927957735205 21.873845989647258 21.6076631623886 20.019211270612093 12 20.897913442552966 26.125193446822138 30.876247398473772 22.100645712151127 13 31.3367842467581 20.34921820801537 24.591493676290092 23.722503868936442 14 21.572549228880945 21.021612679438604 27.15491755163029 30.250920540050164 15 24.945301243396127 29.361652169272638 22.469822295746837 23.223224291584398 16 23.750466940605154 27.224291584396177 25.031431773307006 23.99380970169166 17 23.537328566092107 27.27349378301937 26.13010299375634 23.059074657132182 18 23.33464966113453 26.56449116815198 26.94636853620791 23.154490634505574 19 24.408239500506966 26.326591600405568 27.221516623085545 22.04365227600192 20 23.829233150114735 26.164896739420463 26.940498425743105 23.065371684721704 21 23.603073803297935 26.45221196435242 27.194087197822725 22.75062703452692 22 24.141309568280057 25.85580874112813 26.443673621858153 23.559208068733657 23 23.48086877634879 26.12081754629382 26.903997011580127 23.494316665777255 24 23.411814931426438 25.996691392283473 26.897593254709427 23.69390042158066 25 23.74822562570041 25.720689471156412 26.797267730401835 23.733817172741343 26 23.29985591547041 26.16937936922995 27.149901275414912 23.380863439884735 27 23.849084796413898 26.432787235177972 26.737926250066707 22.980201718341426 28 23.466780511233257 26.62223170926944 26.59266769838305 23.318320081114255 29 23.356315705213724 26.765142216767167 26.91402956401089 22.964512514008216 30 23.89455147019585 26.54335877047868 26.391056086237256 23.17103367308821 31 23.500186776242064 26.012167138054327 26.985858370243875 23.501787715459738 32 23.10165964032232 26.521692726399486 26.822989487165806 23.553658146112387 33 23.358663749399646 25.9075724424996 26.752441432306956 23.9813223757938 34 23.41266876567586 25.954106409093335 27.382250920540052 23.250973904690753 35 23.350659053311276 25.879289182987353 27.053418005229734 23.716633758471637 36 23.200917871818135 25.70030417845136 27.40583809168045 23.692939858050053 37 22.774320934948502 25.450771119056515 27.907145525374887 23.867762420620096 38 22.95127808314211 25.308821175089385 27.96520625433588 23.774694487432626 39 22.365227600192114 25.331767970542717 28.567906505149686 23.735097924115482 40 22.741875233470303 25.12578045786862 28.671967554298522 23.460376754362557 41 22.327018517530284 25.115107529750784 28.900048028176528 23.657825924542397 42 21.992955867442234 25.37424622445168 28.731095576071297 23.901702332034795 43 21.97822722663963 24.584769731575857 28.63450557660494 24.80249746517957 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 788.0 1 680.5 2 573.0 3 839.0 4 1105.0 5 1105.0 6 1183.5 7 1262.0 8 1294.0 9 1326.0 10 1967.5 11 2609.0 12 2609.0 13 4545.0 14 6481.0 15 9429.5 16 12378.0 17 9512.5 18 6647.0 19 6647.0 20 7857.5 21 9068.0 22 8072.5 23 7077.0 24 8611.5 25 10146.0 26 10146.0 27 12186.0 28 14226.0 29 16225.5 30 18225.0 31 21142.5 32 24060.0 33 24060.0 34 27399.0 35 30738.0 36 34596.5 37 38455.0 38 43097.0 39 47739.0 40 47739.0 41 52654.5 42 57570.0 43 61767.0 44 65964.0 45 70378.5 46 74793.0 47 74793.0 48 78442.5 49 82092.0 50 82863.0 51 83634.0 52 81562.5 53 79491.0 54 79491.0 55 73973.0 56 68455.0 57 62617.0 58 56779.0 59 51003.5 60 45228.0 61 45228.0 62 38964.5 63 32701.0 64 27307.0 65 21913.0 66 17758.0 67 13603.0 68 13603.0 69 10971.5 70 8340.0 71 6781.5 72 5223.0 73 4223.5 74 3224.0 75 3224.0 76 2587.0 77 1950.0 78 1596.5 79 1243.0 80 1013.5 81 784.0 82 784.0 83 609.0 84 434.0 85 359.0 86 284.0 87 235.0 88 186.0 89 186.0 90 142.5 91 99.0 92 67.0 93 35.0 94 26.5 95 18.0 96 18.0 97 10.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 936950.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.79481529351382 #Duplication Level Percentage of deduplicated Percentage of total 1 86.43643756165841 62.921245069302635 2 7.793326989862795 11.346275974980362 3 2.4195747850102345 5.283974986909901 4 1.1115335899333654 3.2365552948694263 5 0.6710624518147245 2.442493361513269 6 0.40037356412755915 1.7487071789442883 7 0.2715123686353182 1.3835284907298695 8 0.17581239769072624 1.0238584812964968 9 0.1349956829063928 0.8844287222333359 >10 0.5667797163930951 6.542434399228878 >50 0.013322627849371736 0.6591116501731915 >100 0.004390220257818963 0.6243630334815452 >500 2.9268128676287797E-4 0.140510960983444 >1k 4.39021930144317E-4 0.9233881802915033 >5k 1.4634064338143898E-4 0.8391242150618564 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7877 0.8407065478414003 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3333 0.3557286941672448 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2981 0.3181599871924862 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2354 0.2512407278936976 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.201878435348738E-4 2 0.0 0.0 0.0 0.0 3.201878435348738E-4 3 0.0 0.0 0.0 0.0 3.201878435348738E-4 4 0.0 0.0 0.0 0.0 3.201878435348738E-4 5 0.0 0.0 0.0 0.0 3.201878435348738E-4 6 0.0 0.0 0.0 0.0 3.201878435348738E-4 7 0.0 0.0 0.0 0.0 3.201878435348738E-4 8 0.0 0.0 0.0 0.0 3.201878435348738E-4 9 0.0 0.0 0.0 0.0 5.336464058914563E-4 10 0.0 0.0 0.0 0.0 5.336464058914563E-4 11 1.0672928117829126E-4 0.0 0.0 0.0 5.336464058914563E-4 12 1.0672928117829126E-4 0.0 0.0 0.0 5.336464058914563E-4 13 1.0672928117829126E-4 0.0 0.0 0.0 5.336464058914563E-4 14 1.0672928117829126E-4 0.0 0.0 1.0672928117829126E-4 5.336464058914563E-4 15 1.0672928117829126E-4 0.0 0.0 3.201878435348738E-4 5.336464058914563E-4 16 1.0672928117829126E-4 0.0 0.0 6.403756870697476E-4 5.336464058914563E-4 17 1.0672928117829126E-4 0.0 0.0 9.605635306046213E-4 5.336464058914563E-4 18 1.0672928117829126E-4 0.0 0.0 0.0010672928117829127 5.336464058914563E-4 19 1.0672928117829126E-4 0.0 0.0 0.0010672928117829127 6.403756870697476E-4 20 1.0672928117829126E-4 0.0 0.0 0.002027856342387534 6.403756870697476E-4 21 1.0672928117829126E-4 0.0 0.0 0.002454773467100699 6.403756870697476E-4 22 1.0672928117829126E-4 0.0 0.0 0.00501627621537969 6.403756870697476E-4 23 1.0672928117829126E-4 0.0 0.0 0.0062970275895191845 7.471049682480389E-4 24 1.0672928117829126E-4 0.0 0.0 0.008751801056619884 7.471049682480389E-4 25 1.0672928117829126E-4 0.0 0.0 0.009925823149581087 7.471049682480389E-4 26 1.0672928117829126E-4 0.0 0.0 0.01109984524254229 7.471049682480389E-4 27 1.0672928117829126E-4 0.0 0.0 0.016649767863813437 7.471049682480389E-4 28 1.0672928117829126E-4 0.0 0.0 0.04365227600192113 7.471049682480389E-4 29 1.0672928117829126E-4 0.0 0.0 0.10107262927584183 7.471049682480389E-4 30 1.0672928117829126E-4 0.0 0.0 0.18336090506430439 7.471049682480389E-4 31 1.0672928117829126E-4 0.0 0.0 0.5216927263994877 7.471049682480389E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 635 0.0 19.228346 37 CCGACAT 70 1.2188923E-4 18.5 14 CGGTAGT 70 1.2188923E-4 18.5 1 GGTCTAC 155 2.0008883E-11 17.903225 1 GTTCTAA 85 2.7222462E-5 17.411764 1 TAGGAGT 130 1.3920726E-8 17.076923 4 CGACGTC 70 0.0025920144 15.857142 36 AACGCAG 3040 0.0 15.518092 5 TCTTATA 1085 0.0 15.5161295 37 GTACTTA 275 0.0 15.472728 30 TACTTAC 265 0.0 15.358491 31 AGTGTAC 320 0.0 15.03125 27 TTACCCT 100 1.0930213E-4 14.799999 4 GGAGTGT 365 0.0 14.69863 6 TTATGAC 140 5.990896E-7 14.535714 3 GTCTAAA 140 5.990896E-7 14.535714 1 TTAGGCT 80 0.0062974766 13.875 4 CGACCGA 80 0.0062974766 13.875 18 CGACAAA 80 0.0062974766 13.875 14 CATTACG 160 1.781791E-7 13.875 24 >>END_MODULE