##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727361.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3224128 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.362614015324453 31.0 31.0 34.0 30.0 34.0 2 31.546741630605236 31.0 31.0 34.0 30.0 34.0 3 31.613120508863172 31.0 31.0 34.0 30.0 34.0 4 35.38843091837545 37.0 35.0 37.0 33.0 37.0 5 34.96954029120432 35.0 35.0 37.0 32.0 37.0 6 34.96082382585307 36.0 35.0 37.0 32.0 37.0 7 34.926949550390056 35.0 35.0 37.0 32.0 37.0 8 34.85457494243405 35.0 35.0 37.0 32.0 37.0 9 36.4657311992576 38.0 35.0 39.0 32.0 39.0 10 36.15243253369593 37.0 35.0 39.0 32.0 39.0 11 36.30166079014233 38.0 35.0 39.0 32.0 39.0 12 36.17307346358457 37.0 35.0 39.0 32.0 39.0 13 36.26701297218969 38.0 35.0 39.0 32.0 39.0 14 37.20927177829168 39.0 36.0 40.0 32.0 41.0 15 37.121437486352896 38.0 36.0 40.0 32.0 41.0 16 37.02811116680231 38.0 36.0 40.0 32.0 41.0 17 36.9362007339659 38.0 36.0 40.0 31.0 41.0 18 36.85586831540187 38.0 36.0 40.0 31.0 41.0 19 36.832769666712984 38.0 36.0 40.0 31.0 41.0 20 36.688079381463766 38.0 36.0 40.0 31.0 41.0 21 36.573218867241 38.0 36.0 40.0 30.0 41.0 22 36.47634244049864 38.0 35.0 40.0 30.0 41.0 23 36.332419494511385 38.0 35.0 40.0 30.0 41.0 24 36.182753290191954 38.0 35.0 40.0 30.0 41.0 25 36.07882069198245 38.0 35.0 40.0 29.0 41.0 26 35.63676318061814 38.0 34.0 40.0 27.0 41.0 27 35.35019825515612 38.0 34.0 40.0 27.0 41.0 28 35.16537556821565 38.0 34.0 40.0 26.0 41.0 29 35.097764728943766 38.0 34.0 40.0 26.0 41.0 30 34.99700849345932 38.0 34.0 40.0 26.0 41.0 31 34.75261279949183 38.0 33.0 40.0 25.0 40.0 32 34.630175042678204 38.0 33.0 40.0 25.0 40.0 33 34.428301233697916 38.0 33.0 40.0 24.0 40.0 34 34.257325701709114 37.0 33.0 39.0 24.0 40.0 35 34.068433077098675 37.0 32.0 39.0 24.0 40.0 36 33.890906626535916 37.0 32.0 39.0 23.0 40.0 37 33.5850896738591 37.0 31.0 39.0 22.0 40.0 38 33.445912817357126 37.0 31.0 39.0 21.0 40.0 39 33.24717939238145 37.0 31.0 39.0 20.0 40.0 40 33.09444693262798 37.0 31.0 39.0 19.0 40.0 41 32.930972963852554 36.0 30.0 39.0 19.0 40.0 42 32.690611538995974 36.0 30.0 39.0 18.0 40.0 43 29.460264915040593 33.0 24.0 38.0 9.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 6.0 11 11.0 12 28.0 13 41.0 14 76.0 15 152.0 16 294.0 17 597.0 18 1225.0 19 2216.0 20 4162.0 21 7156.0 22 11628.0 23 17443.0 24 24877.0 25 34048.0 26 44785.0 27 57394.0 28 71922.0 29 89781.0 30 109973.0 31 134228.0 32 163451.0 33 201764.0 34 255513.0 35 334514.0 36 453075.0 37 593448.0 38 521467.0 39 88845.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.47927749766759 19.471528425670446 12.75178901085813 26.29740506580384 2 20.016512992040017 21.493687595529707 33.02772098378228 25.462078428647995 3 19.585977976060505 22.238509141076285 29.870805377453998 28.304707505409215 4 16.12451490759672 16.15425938424281 32.19865960656649 35.52256610159398 5 15.192666047998094 36.54054677729916 33.451029239533916 14.815757935168827 6 37.26855757587788 34.720023522639295 13.521702612303233 14.489716289179585 7 30.75073322150982 30.487902465410805 19.456578647001606 19.304785666077773 8 28.341430613176648 34.678585961847666 18.141308285527124 18.838675139448558 9 27.117750908152534 13.596265408817516 17.445089028723427 41.840894654306524 10 16.092568285130117 27.55185278003851 33.05594566965083 23.29963326518054 11 38.34298762332017 20.53668464775592 20.129256654822637 20.991071074101274 12 22.30792325862993 24.751932925739922 28.899224844671178 24.04091897095897 13 32.71427188994978 19.246196180796794 22.479721648768287 25.55981028048514 14 23.059506322329636 19.911988605911425 24.303160420429958 32.72534465132898 15 26.624098050697736 27.497171328185484 20.468790320979814 25.409940300136967 16 26.028712259562898 25.680276961708714 22.77006371955456 25.52094705917383 17 25.618306717351174 25.898506510907755 23.768845405641464 24.71434136609961 18 25.594920549060085 25.091993866248487 24.04699813406912 25.266087450622308 19 26.365640570101434 25.2996469122814 24.052767135796095 24.281945381821068 20 26.196633632411615 24.92490992913433 23.696701867915916 25.181754570538146 21 25.729654653909524 25.11485276018818 23.75640793417631 25.399084651725985 22 26.335275770689005 24.885364352780037 23.243804216209778 25.53555566032118 23 25.797673045238902 24.637731504456397 23.38337683863668 26.181218611668022 24 25.786538251583064 24.837444419080136 23.441035839768148 25.934981489568653 25 26.077004386922603 24.286473738015363 23.581725043174465 26.05479683188757 26 25.76709113285825 24.589718522341546 23.86595693471227 25.777233410087934 27 26.184072096393194 24.808816523413462 23.491561129086687 25.515550251106657 28 25.861163080373977 25.003349742938248 23.632808622982708 25.502678553705067 29 25.93994407169939 25.048168062806443 23.654519919804674 25.357367945689504 30 25.859364144351588 24.983778559660163 23.644470690989934 25.512386604998312 31 25.991647974273974 24.355019403696133 23.696050529011256 25.95728209301864 32 25.544767453401352 24.715830140738827 23.69608154514957 26.043320860710246 33 25.817430325346884 24.470182325267483 23.63150594517339 26.080881404212242 34 26.071142336780674 24.4075917581436 23.77098551918534 25.750280385890385 35 25.722179764575102 24.591734571332154 23.984190453977014 25.701895210115726 36 25.642127111578695 24.349622595628958 24.091971534628897 25.916278758163447 37 25.32092398316692 24.020479335808005 24.44878118982869 26.20981549119638 38 25.111596065664887 23.974296305853862 24.818989816781468 26.095117811699787 39 24.899383647299363 23.81226799928539 25.096087996506345 26.192260356908907 40 25.133648540008334 23.606724050658038 25.545573872997597 25.714053536336028 41 25.030302767135797 23.369977866883698 25.63238804414713 25.967331321833377 42 24.43994159040832 23.496368630525836 25.814918018143203 26.248771760922647 43 25.079339281815116 22.686940468864762 25.39303650475415 26.840683744565975 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 109.0 1 107.0 2 105.0 3 175.5 4 246.0 5 246.0 6 348.5 7 451.0 8 528.5 9 606.0 10 905.5 11 1205.0 12 1205.0 13 2278.0 14 3351.0 15 5239.0 16 7127.0 17 6087.5 18 5048.0 19 5048.0 20 6632.5 21 8217.0 22 8996.0 23 9775.0 24 12642.5 25 15510.0 26 15510.0 27 20072.5 28 24635.0 29 29967.5 30 35300.0 31 43749.0 32 52198.0 33 52198.0 34 62607.0 35 73016.0 36 86187.0 37 99358.0 38 115612.0 39 131866.0 40 131866.0 41 150307.0 42 168748.0 43 187074.0 44 205400.0 45 225029.5 46 244659.0 47 244659.0 48 263825.0 49 282991.0 50 294937.0 51 306883.0 52 309538.5 53 312194.0 54 312194.0 55 300625.0 56 289056.0 57 269312.5 58 249569.0 59 228041.5 60 206514.0 61 206514.0 62 181872.0 63 157230.0 64 135306.0 65 113382.0 66 94880.0 67 76378.0 68 76378.0 69 63239.0 70 50100.0 71 41618.5 72 33137.0 73 27629.5 74 22122.0 75 22122.0 76 18547.5 77 14973.0 78 12191.0 79 9409.0 80 7513.0 81 5617.0 82 5617.0 83 4517.0 84 3417.0 85 2688.5 86 1960.0 87 1585.0 88 1210.0 89 1210.0 90 932.5 91 655.0 92 462.0 93 269.0 94 177.0 95 85.0 96 85.0 97 60.5 98 36.0 99 23.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3224128.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.536314350993614 #Duplication Level Percentage of deduplicated Percentage of total 1 83.63853139336817 53.14084022464487 2 8.689060364680538 11.041417414902039 3 2.818099793407029 5.371550230391375 4 1.3859859091377984 3.5224174563610733 5 0.8052232972520883 2.5580460268476126 6 0.5250765919342422 2.001685884208944 7 0.3691307577060051 1.641724550076044 8 0.27238267270108407 1.3844952893199909 9 0.21148323778144915 1.2093178928083275 >10 1.2154671294789319 13.661301913785387 >50 0.05384954836924845 2.2861348316067303 >100 0.01492730947270252 1.5647250942029476 >500 3.421226862767477E-4 0.15936483567729848 >1k 4.3987202441375965E-4 0.4569783551674202 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3641 0.11292975961252158 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.304841495126745E-5 2 0.0 0.0 0.0 0.0 9.304841495126745E-5 3 0.0 0.0 0.0 0.0 9.304841495126745E-5 4 0.0 0.0 0.0 0.0 1.240645532683566E-4 5 0.0 0.0 0.0 0.0 1.240645532683566E-4 6 0.0 0.0 0.0 0.0 1.860968299025349E-4 7 0.0 0.0 0.0 0.0 1.860968299025349E-4 8 6.20322766341783E-5 0.0 0.0 0.0 1.860968299025349E-4 9 9.304841495126745E-5 0.0 0.0 0.0 1.860968299025349E-4 10 1.860968299025349E-4 0.0 0.0 0.0 1.860968299025349E-4 11 1.860968299025349E-4 0.0 0.0 0.0 1.860968299025349E-4 12 1.860968299025349E-4 0.0 0.0 0.0 1.860968299025349E-4 13 1.860968299025349E-4 0.0 0.0 0.0 1.860968299025349E-4 14 1.860968299025349E-4 0.0 0.0 0.0 3.4117752148798064E-4 15 1.860968299025349E-4 0.0 0.0 0.0 3.4117752148798064E-4 16 1.860968299025349E-4 0.0 0.0 0.0 3.4117752148798064E-4 17 1.860968299025349E-4 0.0 0.0 0.0 3.4117752148798064E-4 18 1.860968299025349E-4 0.0 0.0 6.20322766341783E-5 4.342259364392481E-4 19 1.860968299025349E-4 0.0 0.0 1.5508069158544574E-4 4.342259364392481E-4 20 1.860968299025349E-4 0.0 0.0 2.481291065367132E-4 4.342259364392481E-4 21 1.860968299025349E-4 0.0 0.0 3.101613831708915E-4 4.342259364392481E-4 22 2.1711296821962404E-4 0.0 0.0 6.513389046588721E-4 4.342259364392481E-4 23 2.1711296821962404E-4 0.0 0.0 7.443873196101396E-4 5.893066280246938E-4 24 2.1711296821962404E-4 0.0 0.0 0.0011786132560493877 5.893066280246938E-4 25 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.0012096293943664768 6.20322766341783E-4 26 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.0017058876074399032 6.20322766341783E-4 27 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.0040010818429045 6.20322766341783E-4 28 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.016996843797764852 6.20322766341783E-4 29 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.04965683744565973 6.513389046588721E-4 30 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.09314146336621872 6.513389046588721E-4 31 2.1711296821962404E-4 3.101613831708915E-5 0.0 0.25718581892530323 6.513389046588721E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 215 0.0 17.209303 6 CTTATAC 1240 0.0 16.858871 37 TCTTATA 2025 0.0 15.439507 37 CGTATAC 75 0.0041065426 14.8 3 GTATTAC 190 4.5656634E-10 14.605264 1 CTCTTAT 3365 0.0 14.569093 37 TAGATCG 100 0.0018337275 12.950001 5 GTAATAC 220 4.092726E-9 12.613636 3 TATACTG 340 0.0 12.514706 5 ACGTTCG 120 5.1258935E-4 12.333334 7 ACCGTAT 120 5.1258935E-4 12.333334 8 GTATAGA 415 0.0 12.036144 1 GTCTTAG 370 0.0 12.0 1 TAAGACA 545 0.0 11.8807335 4 TGTACCG 455 0.0 11.791208 5 TATACAG 505 0.0 11.722772 5 TAAACAG 570 0.0 11.684211 5 CGCGCAA 190 1.435943E-6 11.684211 20 ATAAGAC 270 5.802576E-10 11.648149 3 TAAGAGT 510 0.0 11.607843 4 >>END_MODULE