##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727360.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1828721 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.506707693519132 31.0 31.0 34.0 30.0 34.0 2 31.677996260774606 31.0 31.0 34.0 30.0 34.0 3 31.7408565877463 31.0 31.0 34.0 30.0 34.0 4 35.484659496992705 37.0 35.0 37.0 33.0 37.0 5 35.160161118071045 37.0 35.0 37.0 32.0 37.0 6 35.15551032661625 37.0 35.0 37.0 32.0 37.0 7 35.1049668046684 36.0 35.0 37.0 32.0 37.0 8 35.038083994223285 36.0 35.0 37.0 32.0 37.0 9 36.68687186290309 38.0 35.0 39.0 32.0 39.0 10 36.387618997102344 38.0 35.0 39.0 32.0 39.0 11 36.53597404962266 38.0 35.0 39.0 32.0 39.0 12 36.38192594715104 38.0 35.0 39.0 32.0 39.0 13 36.47709519385406 38.0 35.0 39.0 32.0 39.0 14 37.46722381380211 39.0 36.0 40.0 32.0 41.0 15 37.38369713039879 39.0 36.0 40.0 32.0 41.0 16 37.280006080752614 39.0 36.0 40.0 32.0 41.0 17 37.1729055443668 39.0 36.0 40.0 32.0 41.0 18 37.075927383127336 39.0 36.0 40.0 31.0 41.0 19 37.031291268597016 39.0 36.0 40.0 31.0 41.0 20 36.87252894235917 39.0 36.0 40.0 31.0 41.0 21 36.743773380411774 38.0 36.0 40.0 31.0 41.0 22 36.63190120308128 38.0 36.0 40.0 30.0 41.0 23 36.476404547221804 38.0 35.0 40.0 30.0 41.0 24 36.31450396205873 38.0 35.0 40.0 30.0 41.0 25 36.177026457289 38.0 35.0 40.0 29.0 41.0 26 35.70349769046235 38.0 34.0 40.0 27.0 41.0 27 35.385242472744615 38.0 34.0 40.0 27.0 41.0 28 35.17724026792496 38.0 34.0 40.0 26.0 41.0 29 35.10619389179651 38.0 34.0 40.0 25.0 41.0 30 34.990410784367874 38.0 34.0 40.0 25.0 41.0 31 34.72183673726063 38.0 33.0 40.0 25.0 41.0 32 34.576718373114325 38.0 33.0 40.0 24.0 41.0 33 34.355310077371016 38.0 33.0 40.0 24.0 41.0 34 34.166148909538414 38.0 33.0 40.0 23.0 40.0 35 33.95588610837848 37.0 32.0 40.0 23.0 40.0 36 33.742249364446515 37.0 32.0 40.0 21.0 40.0 37 33.41801291722466 37.0 31.0 39.0 20.0 40.0 38 33.275529181323996 37.0 31.0 39.0 19.0 40.0 39 33.04189157340021 37.0 31.0 39.0 18.0 40.0 40 32.8729789836722 37.0 30.0 39.0 18.0 40.0 41 32.689840604444306 36.0 30.0 39.0 17.0 40.0 42 32.44463370847713 36.0 30.0 39.0 15.0 40.0 43 28.918797892078672 33.0 24.0 37.0 9.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 5.0 12 14.0 13 15.0 14 33.0 15 54.0 16 127.0 17 288.0 18 639.0 19 1233.0 20 2529.0 21 4376.0 22 7212.0 23 10934.0 24 15421.0 25 20611.0 26 27039.0 27 33765.0 28 42001.0 29 50791.0 30 62094.0 31 74346.0 32 89894.0 33 109091.0 34 135689.0 35 174615.0 36 236444.0 37 323581.0 38 336624.0 39 69250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.78132093413922 17.538596647602343 11.556656264132146 28.123426154126296 2 20.951856516111533 20.075834421981263 31.087574321069205 27.884734740837995 3 19.844798632486857 20.54523352660138 28.536337691752873 31.073630149158895 4 16.796110505648485 15.039746358247102 30.32348838341114 37.840654752693275 5 15.96760796206748 35.74268573500277 32.59474791397922 15.694958388950528 6 39.75964622268788 33.00913589333748 12.593118359771665 14.63809952420298 7 32.83983724143814 29.239342688141058 17.964686794759835 19.956133275660967 8 30.093764986567113 33.23918738834409 16.995047358235617 19.672000266853175 9 27.978789547448734 12.382479339385286 15.664663991937536 43.974067121228444 10 16.589189931104855 26.48200572968758 31.808405984291753 25.120398354915814 11 40.92811314574503 19.100507950638725 18.6991345317301 21.272244371886142 12 23.71318533554326 23.12917060612308 27.309086514564 25.84855754376966 13 34.24852670254238 17.819011210567385 20.960824532555815 26.97163755433442 14 24.315956343258485 17.949156815063645 22.224330556711493 35.51055628496638 15 27.857994740586456 25.75712752245969 18.81435166982826 27.570526067125606 16 27.886265865596776 24.12128476678509 20.743951647080117 27.24849772053802 17 27.36333207744648 24.014488814860222 21.756845358039854 26.86533374965345 18 27.4064223028007 23.49417981201069 21.92603464388499 27.173363241303623 19 28.247720674722938 23.487891263894273 21.90645812018345 26.357929941199345 20 28.148306931456467 22.971902220185584 21.708396196029902 27.171394652328047 21 27.658073593511528 23.11462492091467 21.78992858943491 27.437372896138886 22 28.336471227705047 22.81299334343511 21.353612716209856 27.49692271264999 23 27.87625887163761 22.802002054988158 21.418029322132792 27.90370975124144 24 27.815506028530322 22.70089313788161 21.472767032259156 28.010833801328904 25 27.954236868281164 22.29716834880772 21.68548400767531 28.063110775235806 26 27.679235924998945 22.596011091905215 21.735847075633735 27.988905907462104 27 27.931926193224665 22.877355266330948 21.568079548493184 27.622638991951202 28 27.82026345188796 23.013844101970722 21.454830999370596 27.711061446770724 29 27.879649219317766 23.276431998101405 21.450511040229756 27.393407742351073 30 28.05157265651786 23.0082117501795 21.36361971016902 27.57659588313362 31 27.90928742000557 22.544116899188012 21.56518134805692 27.981414332749498 32 27.495938418162204 22.97671432657032 21.617184906828324 27.910162348439155 33 27.44841886761294 22.647850601595323 21.683515418699738 28.220215112092 34 27.62843539282373 22.550132032168932 22.060828305684684 27.76060426932266 35 27.50523453276908 22.49725354496394 22.219846548489354 27.777665373777626 36 27.359832363712123 22.415994566694426 22.288200332363438 27.93597273723001 37 27.13896761725818 22.025503070178555 22.664255509725102 28.171273802838158 38 26.855108023585885 22.022112722498402 22.894416370785923 28.228362883129794 39 26.527775423369665 21.896997956495277 23.441246641778598 28.13397997835646 40 26.836843892534727 21.501147523323677 23.79280382299979 27.869204761141802 41 26.448266301967333 21.406163105252247 24.128448243335097 28.017122349445323 42 26.025457136435794 21.26212801187278 24.47322472919598 28.23919012249545 43 26.38122491074363 20.17109225518819 24.191005626336658 29.256677207731524 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 18.0 1 15.0 2 12.0 3 27.5 4 43.0 5 43.0 6 54.5 7 66.0 8 78.0 9 90.0 10 118.5 11 147.0 12 147.0 13 266.5 14 386.0 15 649.0 16 912.0 17 803.0 18 694.0 19 694.0 20 951.0 21 1208.0 22 1510.5 23 1813.0 24 2369.0 25 2925.0 26 2925.0 27 3892.0 28 4859.0 29 6212.0 30 7565.0 31 9834.0 32 12103.0 33 12103.0 34 15205.5 35 18308.0 36 23063.5 37 27819.0 38 34507.5 39 41196.0 40 41196.0 41 50009.0 42 58822.0 43 70121.0 44 81420.0 45 95354.5 46 109289.0 47 109289.0 48 125297.5 49 141306.0 50 155870.0 51 170434.0 52 180033.0 53 189632.0 54 189632.0 55 192610.0 56 195588.0 57 190270.5 58 184953.0 59 174282.0 60 163611.0 61 163611.0 62 147141.0 63 130671.0 64 113613.5 65 96556.0 66 81316.0 67 66076.0 68 66076.0 69 54774.0 70 43472.0 71 36082.5 72 28693.0 73 23585.0 74 18477.0 75 18477.0 76 15169.5 77 11862.0 78 9691.5 79 7521.0 80 6061.5 81 4602.0 82 4602.0 83 3608.5 84 2615.0 85 2039.5 86 1464.0 87 1158.0 88 852.0 89 852.0 90 632.0 91 412.0 92 284.0 93 156.0 94 105.0 95 54.0 96 54.0 97 33.5 98 13.0 99 9.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1828721.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.35851720721415 #Duplication Level Percentage of deduplicated Percentage of total 1 84.77866988763151 59.649015040936504 2 8.483088804418804 11.937150992320523 3 2.7162614702300214 5.733363881774155 4 1.3066865179207647 3.6774610342225156 5 0.7266901362367505 2.5564420227363107 6 0.45511328425237557 1.921265750478151 7 0.30627068748339986 1.508412600475627 8 0.23000651497422442 1.2946333873268263 9 0.1716760618410575 1.0870985835999727 >10 0.8025296172930246 9.304637115488436 >50 0.018721900399272927 0.8784887754196988 >100 0.004207241829487884 0.42348416257735394 >500 7.787548941986646E-5 0.028546652643936753 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.468302709926774E-5 2 0.0 0.0 0.0 0.0 5.468302709926774E-5 3 0.0 0.0 0.0 0.0 5.468302709926774E-5 4 0.0 0.0 0.0 0.0 5.468302709926774E-5 5 0.0 0.0 0.0 0.0 5.468302709926774E-5 6 0.0 0.0 0.0 0.0 5.468302709926774E-5 7 0.0 0.0 0.0 0.0 1.0936605419853548E-4 8 0.0 0.0 0.0 0.0 1.0936605419853548E-4 9 0.0 0.0 0.0 0.0 2.734151354963387E-4 10 0.0 0.0 0.0 0.0 2.734151354963387E-4 11 0.0 0.0 0.0 0.0 2.734151354963387E-4 12 0.0 0.0 0.0 0.0 3.2809816259560644E-4 13 0.0 0.0 0.0 0.0 3.2809816259560644E-4 14 5.468302709926774E-5 0.0 0.0 0.0 4.374642167941419E-4 15 5.468302709926774E-5 0.0 0.0 5.468302709926774E-5 4.921472438934097E-4 16 5.468302709926774E-5 0.0 0.0 1.0936605419853548E-4 6.561963251912129E-4 17 5.468302709926774E-5 0.0 0.0 1.6404908129780322E-4 6.561963251912129E-4 18 5.468302709926774E-5 0.0 0.0 1.6404908129780322E-4 7.655623793897484E-4 19 5.468302709926774E-5 0.0 0.0 1.6404908129780322E-4 8.202454064890161E-4 20 5.468302709926774E-5 0.0 0.0 1.6404908129780322E-4 8.202454064890161E-4 21 5.468302709926774E-5 0.0 0.0 1.6404908129780322E-4 8.202454064890161E-4 22 5.468302709926774E-5 0.0 0.0 2.734151354963387E-4 8.202454064890161E-4 23 5.468302709926774E-5 0.0 0.0 2.734151354963387E-4 9.842944877868193E-4 24 5.468302709926774E-5 0.0 0.0 6.561963251912129E-4 9.842944877868193E-4 25 5.468302709926774E-5 0.0 0.0 7.655623793897484E-4 9.842944877868193E-4 26 5.468302709926774E-5 0.0 0.0 0.001038977514886087 9.842944877868193E-4 27 5.468302709926774E-5 0.0 0.0 0.003171615571757529 0.0010936605419853548 28 5.468302709926774E-5 0.0 0.0 0.018100081969857622 0.0010936605419853548 29 5.468302709926774E-5 0.0 0.0 0.05129267941911314 0.0010936605419853548 30 5.468302709926774E-5 0.0 0.0 0.09514846715272586 0.0010936605419853548 31 5.468302709926774E-5 5.468302709926774E-5 0.0 0.2327309633344835 0.0011483435690846225 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 775 0.0 20.529032 1 ATTATAG 100 2.877241E-7 18.5 3 ATATTAC 50 0.0070364336 18.5 1 TCGTTAC 160 3.45608E-11 17.34375 23 CGTTACG 150 4.6748028E-9 16.033333 24 CGAACCG 70 0.00259328 15.857142 18 TAAGTAG 70 0.00259328 15.857142 5 TACTACG 70 0.00259328 15.857142 2 TATACAT 105 9.3490635E-6 15.857142 5 GTATCAA 1010 0.0 15.569307 2 TTACGGA 250 0.0 15.54 26 TAAGACT 240 0.0 15.416667 4 CTCGTTA 170 1.4879333E-9 15.235294 22 TAACGCG 85 5.3663034E-4 15.235294 5 TAGACAG 270 0.0 15.074075 5 ATAAGAC 135 3.9755832E-7 15.074075 3 GTTACGG 210 9.094947E-12 14.97619 25 TAGGAGT 235 0.0 14.957447 4 ATTACGG 150 8.108691E-8 14.8 25 TTTTACG 75 0.00410564 14.8 2 >>END_MODULE