##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727358.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2040052 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16876677653315 33.0 31.0 34.0 30.0 34.0 2 32.30802842280491 34.0 31.0 34.0 30.0 34.0 3 32.39946040591122 34.0 31.0 34.0 30.0 34.0 4 35.96189165766363 37.0 35.0 37.0 35.0 37.0 5 35.82736714554335 37.0 35.0 37.0 35.0 37.0 6 35.86654653900979 37.0 35.0 37.0 35.0 37.0 7 35.77342685382529 37.0 35.0 37.0 35.0 37.0 8 35.76681035581446 37.0 35.0 37.0 35.0 37.0 9 37.50684835484586 39.0 37.0 39.0 35.0 39.0 10 37.37732861711368 39.0 37.0 39.0 34.0 39.0 11 37.47980247562317 39.0 37.0 39.0 35.0 39.0 12 37.40210494634451 39.0 37.0 39.0 34.0 39.0 13 37.431769386270545 39.0 37.0 39.0 35.0 39.0 14 38.59329811200891 40.0 38.0 41.0 34.0 41.0 15 38.57080799901179 40.0 38.0 41.0 34.0 41.0 16 38.452501210753454 40.0 38.0 41.0 34.0 41.0 17 38.43895155613681 40.0 38.0 41.0 34.0 41.0 18 38.414821779052694 40.0 38.0 41.0 34.0 41.0 19 38.42591561391573 40.0 38.0 41.0 34.0 41.0 20 38.344176030807056 40.0 38.0 41.0 34.0 41.0 21 38.25853066490462 40.0 38.0 41.0 34.0 41.0 22 38.19662636050454 40.0 38.0 41.0 34.0 41.0 23 38.087226207959404 40.0 38.0 41.0 33.0 41.0 24 37.998473568320804 40.0 37.0 41.0 33.0 41.0 25 37.91513941801483 40.0 37.0 41.0 33.0 41.0 26 37.58258956144255 40.0 37.0 41.0 32.0 41.0 27 37.351196440090746 39.0 37.0 41.0 32.0 41.0 28 37.21461903912253 39.0 37.0 41.0 31.0 41.0 29 37.12770311737152 39.0 36.0 40.0 31.0 41.0 30 37.06679045436097 39.0 36.0 40.0 31.0 41.0 31 36.887467084172364 39.0 36.0 40.0 30.0 41.0 32 36.77549395799715 39.0 36.0 40.0 30.0 41.0 33 36.61794454259009 39.0 36.0 40.0 30.0 41.0 34 36.44774495944221 39.0 35.0 40.0 30.0 41.0 35 36.29121414552178 39.0 35.0 40.0 30.0 41.0 36 36.177040585239986 39.0 35.0 40.0 29.0 41.0 37 35.96650771646997 38.0 35.0 40.0 28.0 41.0 38 35.888374413985524 38.0 35.0 40.0 27.0 41.0 39 35.74879120728295 38.0 35.0 40.0 27.0 41.0 40 35.574311831267046 38.0 35.0 40.0 26.0 41.0 41 35.44940472105613 38.0 35.0 40.0 26.0 41.0 42 35.24042132259374 38.0 34.0 40.0 25.0 41.0 43 31.668077578414668 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 10.0 12 11.0 13 8.0 14 15.0 15 14.0 16 42.0 17 69.0 18 150.0 19 330.0 20 676.0 21 1411.0 22 2612.0 23 4285.0 24 6710.0 25 9758.0 26 13629.0 27 18052.0 28 23719.0 29 30643.0 30 39368.0 31 49546.0 32 62195.0 33 79309.0 34 103127.0 35 137413.0 36 195497.0 37 312781.0 38 556470.0 39 392196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.87449535600073 18.310170525065047 13.123439990745334 25.691894128188892 2 17.56710123075294 21.50788313239074 35.08180183642378 25.84321380043254 3 19.132355449763043 22.770890153780392 30.566524774858678 27.53022962159788 4 15.038146086472306 15.104222833535616 32.783919233431305 37.07371184656078 5 15.157456770709764 36.44260048273279 33.414099248450526 14.98584349810691 6 37.112877514886875 34.46461168636878 13.466078315650778 14.956432483093568 7 29.338565879693263 31.02440526025807 20.426342073633418 19.21068678641525 8 28.049824220166936 35.41404826935784 19.15661953714905 17.37950797332617 9 26.68093754472925 14.50634591667271 17.829055337805112 40.98366120079292 10 15.386568577663706 27.527533611888323 33.72472858534978 23.361169225098184 11 36.71636801414866 21.309652891200813 20.31021758268907 21.66376151196146 12 22.048114459827495 24.90328677896446 29.65728324572119 23.39131551548686 13 32.866466148902084 19.02382880436381 23.977182934552648 24.132522112181455 14 23.274357712450467 19.769349016593697 25.827822035908888 31.128471235046952 15 27.20161054718213 26.785934868326887 22.054928011638918 23.957526572852064 16 25.565328726914803 24.896130098644544 24.994509943864177 24.544031230576476 17 24.531531549195805 27.026026787552475 25.534496179509148 22.90794548374257 18 24.57074623588026 24.407956267781408 27.14362182924749 23.877675667090838 19 24.57442261275693 27.035634385790164 25.07490005156731 23.31504294988559 20 24.348251907304324 25.516996625576212 25.82649854023329 24.30825292688618 21 23.864636783768255 26.87862858397727 24.696576361779012 24.56015827047546 22 24.57628531037444 25.909437602570918 23.989829671008387 25.524447416046257 23 24.822210414244342 24.77142739498797 24.252862181944383 26.153500008823304 24 24.083258662034105 25.41695015617249 24.648097205365353 25.851693976428052 25 25.287002488171872 24.97686333485617 24.368594526021887 25.36753965095007 26 24.99799024730742 24.14149247176052 25.57282853574321 25.287688745188845 27 25.502732283294737 25.881791248458374 25.224258989476738 23.391217478770148 28 25.898702582091044 24.900786842688323 24.937942758321846 24.262567816898787 29 24.09668969222353 25.474595745598645 26.311339122728246 24.11737543944958 30 24.38437843741238 25.64704233029354 25.84983127881054 24.11874795348354 31 24.4144757094427 24.130218249338743 25.298864930893917 26.15644111032464 32 24.1047777213522 25.036567695333257 25.35219690478478 25.506457678529763 33 25.63135645561976 24.95970690943172 24.42908318023266 24.97985345471586 34 24.950883604927718 25.08107636472012 25.31415865870086 24.653881371651313 35 24.229578461725485 25.563662102730717 26.008552723165877 24.19820671237792 36 24.56378562899377 24.63486224860935 25.44709644656117 25.354255675835713 37 23.142988512057535 23.867038683327678 26.56461698035148 26.425355824263303 38 23.776648830520006 23.901008405668094 26.870050371265048 25.452292392546855 39 23.849833239544875 23.18445804322635 27.05298688464804 25.912721832580736 40 23.95536976508442 23.222888436177115 28.657896955567796 24.163844843170665 41 24.09923864685802 22.71157794017015 27.8603192467643 25.328864166207527 42 23.108332532700146 22.943434775192003 29.03327954385476 24.914953148253083 43 23.265044224362907 21.947381733406797 28.932399762359 25.855174279871296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 549.0 1 432.5 2 316.0 3 667.0 4 1018.0 5 1018.0 6 1227.0 7 1436.0 8 1457.0 9 1478.0 10 2090.5 11 2703.0 12 2703.0 13 5205.0 14 7707.0 15 11836.5 16 15966.0 17 12282.0 18 8598.0 19 8598.0 20 10127.0 21 11656.0 22 10655.0 23 9654.0 24 11885.5 25 14117.0 26 14117.0 27 17495.0 28 20873.0 29 24480.5 30 28088.0 31 33297.5 32 38507.0 33 38507.0 34 44619.0 35 50731.0 36 58819.5 37 66908.0 38 75933.0 39 84958.0 40 84958.0 41 94832.0 42 104706.0 43 115266.0 44 125826.0 45 137909.0 46 149992.0 47 149992.0 48 167318.0 49 184644.0 50 197740.5 51 210837.0 52 226720.0 53 242603.0 54 242603.0 55 207220.5 56 171838.0 57 153011.5 58 134185.0 59 121624.0 60 109063.0 61 109063.0 62 95465.5 63 81868.0 64 69355.5 65 56843.0 66 47271.5 67 37700.0 68 37700.0 69 30867.0 70 24034.0 71 19515.0 72 14996.0 73 12385.0 74 9774.0 75 9774.0 76 7984.5 77 6195.0 78 5083.0 79 3971.0 80 3209.5 81 2448.0 82 2448.0 83 1956.0 84 1464.0 85 1152.0 86 840.0 87 685.5 88 531.0 89 531.0 90 389.0 91 247.0 92 181.0 93 115.0 94 78.5 95 42.0 96 42.0 97 30.5 98 19.0 99 13.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2040052.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.01524596272486 #Duplication Level Percentage of deduplicated Percentage of total 1 84.73186902936216 53.39399567766646 2 8.333197061709459 10.502369249989554 3 2.63249070451794 4.976611477193547 4 1.2761747021067273 3.216738509786502 5 0.7475535830309223 2.355363645250492 6 0.48967751917178576 1.8514289587816206 7 0.3300115830093819 1.4557032751719077 8 0.24436112289701437 1.23187810104664 9 0.18600166540190735 1.054884662529988 >10 0.9704016608532897 10.347172420713424 >50 0.03592278758440062 1.5294172446992045 >100 0.017436850505463834 2.1337675488125587 >500 0.002334157071189152 1.0128934299139207 >1k 0.002178546599776521 2.8090767304074618 >5k 2.3341570711891296E-4 1.0994789276257082 >10k+ 1.5561047141260864E-4 1.0292201404110979 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 10714 0.5251826914215912 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10278 0.503810687178562 No Hit CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT 8254 0.40459752986688574 No Hit GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG 7152 0.35057929895904616 No Hit TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG 7019 0.3440598572977552 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4020 0.19705380058939675 No Hit TATCAACGCAGAGTACGGAAGCAGTGGTATCAACGCAGAGTAC 3680 0.18038755874850249 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3590 0.17597590649650108 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCTGTCTC 3243 0.1589665361471178 No Hit CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACCTGTCTC 3038 0.14891777268422568 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3019 0.14798642387546984 No Hit GCGTTGATACCACTGCTTCCGTACTCTGCGTTGATACCACTGC 2762 0.135388705778088 No Hit GGTATCAACGCAGAGTACGGAAGCAGTGGTATCAACGCAGAGT 2521 0.1235752814143953 No Hit GCTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCG 2392 0.11725191318652663 No Hit ACGCAGAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAG 2149 0.10534045210612278 No Hit ATACCACTGCTTCCGTACTCTGCGTTGATACCACTGCTTCCGT 2134 0.10460517673078923 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 4.901835835557133E-5 0.0 0.0 0.0 6 0.0 4.901835835557133E-5 0.0 0.0 1.47055075066714E-4 7 0.0 4.901835835557133E-5 0.0 0.0 1.9607343342228532E-4 8 0.0 4.901835835557133E-5 0.0 0.0 1.9607343342228532E-4 9 0.0 4.901835835557133E-5 0.0 4.901835835557133E-5 1.9607343342228532E-4 10 0.0 4.901835835557133E-5 0.0 4.901835835557133E-5 1.9607343342228532E-4 11 0.0 4.901835835557133E-5 0.0 4.901835835557133E-5 1.9607343342228532E-4 12 0.0 4.901835835557133E-5 0.0 4.901835835557133E-5 2.94110150133428E-4 13 0.0 4.901835835557133E-5 0.0 9.803671671114266E-5 2.94110150133428E-4 14 0.0 4.901835835557133E-5 0.0 9.803671671114266E-5 4.4116522520014194E-4 15 0.0 4.901835835557133E-5 0.0 2.450917917778566E-4 4.4116522520014194E-4 16 0.0 4.901835835557133E-5 0.0 4.4116522520014194E-4 4.901835835557132E-4 17 0.0 4.901835835557133E-5 0.0 7.842937336891413E-4 4.901835835557132E-4 18 0.0 4.901835835557133E-5 0.0 9.803671671114265E-4 4.901835835557132E-4 19 0.0 4.901835835557133E-5 0.0 0.0015195691090227111 5.392019419112846E-4 20 0.0 4.901835835557133E-5 0.0 0.002401899559422995 5.392019419112846E-4 21 4.901835835557133E-5 4.901835835557133E-5 0.0 0.0033332483681788503 5.392019419112846E-4 22 4.901835835557133E-5 4.901835835557133E-5 0.0 0.005441037777468418 5.392019419112846E-4 23 4.901835835557133E-5 4.901835835557133E-5 0.0 0.006960606886491129 6.862570169779986E-4 24 4.901835835557133E-5 4.901835835557133E-5 0.0 0.009509561520980838 6.862570169779986E-4 25 4.901835835557133E-5 4.901835835557133E-5 0.0 0.012744773172448546 7.842937336891413E-4 26 4.901835835557133E-5 4.901835835557133E-5 0.0 0.015097654373515968 8.333120920447126E-4 27 4.901835835557133E-5 4.901835835557133E-5 0.0 0.021666114393162527 8.333120920447126E-4 28 4.901835835557133E-5 4.901835835557133E-5 0.0 0.0500967622393939 8.333120920447126E-4 29 4.901835835557133E-5 4.901835835557133E-5 0.0 0.10563456225625621 8.333120920447126E-4 30 4.901835835557133E-5 4.901835835557133E-5 0.0 0.18533841294241518 8.333120920447126E-4 31 4.901835835557133E-5 4.901835835557133E-5 0.0 0.5473389893983095 9.313488087558553E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1280 0.0 19.65625 37 TATAACG 60 9.2401623E-4 18.5 2 TCTTATA 2345 0.0 16.567165 37 ACGGACT 445 0.0 15.382022 30 TCGTGTA 75 0.0041058552 14.8 9 GTAAGAC 140 6.000919E-7 14.535714 3 TTTAGAC 195 6.730261E-10 14.23077 3 CGCGGTT 130 4.4477383E-6 14.230769 18 TATACTG 300 0.0 14.183333 5 GTTCTAG 250 0.0 14.059999 1 TACGGAC 450 0.0 13.9777775 29 CTAACAC 255 1.8189894E-12 13.784313 3 ATAACGC 95 0.0012456523 13.631579 3 CGGACTG 520 0.0 13.519231 31 ATAACAC 165 2.597717E-7 13.454545 3 TAGTACT 165 2.597717E-7 13.454545 4 CGTACCT 1110 0.0 13.166667 32 CTCTTAT 3660 0.0 13.040984 37 GAGTACT 3245 0.0 12.941448 11 GTATAGT 160 2.697714E-6 12.71875 1 >>END_MODULE