##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727357.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1725258 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16506168932415 33.0 31.0 34.0 30.0 34.0 2 32.31206636920391 34.0 31.0 34.0 30.0 34.0 3 32.39318699000381 34.0 31.0 34.0 30.0 34.0 4 35.96339388079928 37.0 35.0 37.0 35.0 37.0 5 35.850864624305466 37.0 35.0 37.0 35.0 37.0 6 35.862025853524514 37.0 35.0 37.0 35.0 37.0 7 35.81220373996237 37.0 35.0 37.0 35.0 37.0 8 35.78783173299298 37.0 35.0 37.0 35.0 37.0 9 37.515216274899174 39.0 37.0 39.0 35.0 39.0 10 37.355698683906986 39.0 37.0 39.0 34.0 39.0 11 37.46305943806665 39.0 37.0 39.0 35.0 39.0 12 37.36456866161467 39.0 37.0 39.0 34.0 39.0 13 37.4257096619752 39.0 37.0 39.0 35.0 39.0 14 38.6028408504699 40.0 38.0 41.0 34.0 41.0 15 38.57108907769157 40.0 38.0 41.0 34.0 41.0 16 38.51123715989145 40.0 38.0 41.0 34.0 41.0 17 38.473352391352485 40.0 38.0 41.0 34.0 41.0 18 38.42221511217453 40.0 38.0 41.0 34.0 41.0 19 38.42852895045263 40.0 38.0 41.0 34.0 41.0 20 38.31013970084474 40.0 38.0 41.0 34.0 41.0 21 38.22753930136826 40.0 38.0 41.0 34.0 41.0 22 38.16161582789357 40.0 38.0 41.0 34.0 41.0 23 38.05205018611709 40.0 38.0 41.0 33.0 41.0 24 37.947417139929215 40.0 37.0 41.0 33.0 41.0 25 37.86430783106063 40.0 37.0 41.0 33.0 41.0 26 37.51147364626044 40.0 37.0 41.0 32.0 41.0 27 37.29522425051789 39.0 37.0 41.0 31.0 41.0 28 37.16134688261118 39.0 36.0 41.0 31.0 41.0 29 37.11611074981249 39.0 36.0 40.0 31.0 41.0 30 37.03039197615661 39.0 36.0 40.0 31.0 41.0 31 36.81849671179615 39.0 36.0 40.0 30.0 41.0 32 36.71837429532279 39.0 36.0 40.0 30.0 41.0 33 36.53859538689286 39.0 36.0 40.0 30.0 41.0 34 36.4011162388466 39.0 35.0 40.0 30.0 41.0 35 36.24713173334075 39.0 35.0 40.0 29.0 41.0 36 36.10586474602639 39.0 35.0 40.0 29.0 41.0 37 35.88459233343651 38.0 35.0 40.0 27.0 41.0 38 35.781098247334604 38.0 35.0 40.0 27.0 41.0 39 35.62545543912852 38.0 35.0 40.0 26.0 41.0 40 35.48682168116305 38.0 35.0 40.0 26.0 41.0 41 35.359625632803905 38.0 34.0 40.0 25.0 41.0 42 35.16376043467122 38.0 34.0 40.0 24.0 41.0 43 31.745138408284443 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 10.0 12 5.0 13 6.0 14 15.0 15 9.0 16 38.0 17 62.0 18 136.0 19 331.0 20 680.0 21 1325.0 22 2273.0 23 3887.0 24 5970.0 25 8665.0 26 11992.0 27 15858.0 28 21016.0 29 26832.0 30 33994.0 31 42703.0 32 53244.0 33 67743.0 34 86954.0 35 116072.0 36 162870.0 37 258252.0 38 464825.0 39 339483.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.21107799529114 18.885349321666673 12.705519985996297 26.198052697045892 2 18.510101097922746 21.178687477467136 34.72408184746861 25.587129577141503 3 18.29001807265928 22.126719597880435 31.006087205507814 28.577175123952475 4 14.574168037476134 15.720373416613631 33.952139332204226 35.75331921370601 5 14.255606987476654 37.24590756860713 34.38905949139201 14.109425952524202 6 36.12056863379274 35.82542437131142 14.07650334036996 13.977503654525874 7 30.14198456114969 31.247384449166443 20.104703180625737 18.50592780905812 8 28.03203926601123 35.31958698351203 18.64747185638322 18.00090189409352 9 27.094672217140857 13.595647723412963 18.206204521294787 41.10347553815139 10 15.426678212765859 27.908753357468854 33.88223674372181 22.782331686043477 11 37.37933688758435 21.038128790012856 21.232650420980516 20.34988390142228 12 21.653804822235283 25.209273047857188 30.131087640225402 23.005834489682123 13 31.824631446427144 19.725165743326507 23.65118724271964 24.799015567526713 14 22.38476795934289 20.01752781323141 25.845409787985336 31.75229443944036 15 25.446686814377905 28.23455970063608 21.615433749618898 24.703319735367117 16 24.94009591608907 26.360347264003416 23.790470758576397 24.909086061331116 17 24.397336514306843 26.429322454960356 25.14209468960584 24.03124634112695 18 24.455878483102236 25.580927606189913 25.64990279714686 24.313291113560986 19 25.353599287758698 25.530268516361033 25.734122084928746 23.38201011095152 20 25.059788159220243 25.325893286685236 25.49728794186145 24.11703061223307 21 24.73780733084559 25.519197708400714 25.62132736089327 24.121667599860427 22 25.31592376328642 25.20185386765342 25.03874782786111 24.443474541199055 23 24.670107311486166 25.274074949949515 25.213678186103177 24.84213955246114 24 24.620665430909465 25.202781265178892 25.286247042471327 24.89030626144032 25 24.92566329209892 24.87546790103277 25.33273284343559 24.866135963432715 26 24.46834038735076 25.18933400105955 25.62022607633177 24.722099535257914 27 24.735546799377254 25.533746257081553 25.25199129637422 24.478715647166975 28 24.622520225960407 25.48366679070608 25.331747483564776 24.56206549976873 29 24.56849932010169 25.76408861747055 25.388724469035935 24.27868759339183 30 24.804579952679543 25.646135244699636 25.132299053243052 24.416985749377773 31 24.684250123749607 24.987451152233465 25.473755229652607 24.85454349436432 32 24.183571384685653 25.420777646010045 25.508764486239162 24.88688648306514 33 24.396003380363982 24.960440699304105 25.599881293116738 25.043674627215175 34 24.636836925259875 24.749052025841934 26.069955913840133 24.54415513505806 35 24.420579414788975 24.808927128580187 26.054016268871088 24.716477187759743 36 24.27138433787874 24.45895048740536 26.333858472182133 24.935806702533768 37 23.969748292719117 24.109727356719983 26.608252215031026 25.312272135529874 38 23.591949725780147 24.041505676252477 27.045809960017575 25.320734637949805 39 23.398007718265905 23.867966414298618 27.596857977183703 25.137167890251778 40 23.547840380974904 23.716336918884014 27.917157897543436 24.818664802597638 41 23.127091716137528 23.568127201844593 28.28255252257923 25.02222855943865 42 22.62502188078537 23.852084731674914 28.335240294495083 25.18765309304463 43 22.728078930803395 22.920745766720106 28.252064328929354 26.099110973547145 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 223.0 1 233.5 2 244.0 3 575.0 4 906.0 5 906.0 6 1035.5 7 1165.0 8 1233.0 9 1301.0 10 1902.0 11 2503.0 12 2503.0 13 4422.0 14 6341.0 15 10011.5 16 13682.0 17 10794.0 18 7906.0 19 7906.0 20 9383.0 21 10860.0 22 10214.5 23 9569.0 24 11815.5 25 14062.0 26 14062.0 27 17160.5 28 20259.0 29 23791.0 30 27323.0 31 32025.5 32 36728.0 33 36728.0 34 42453.0 35 48178.0 36 55126.0 37 62074.0 38 70233.5 39 78393.0 40 78393.0 41 87764.5 42 97136.0 43 106360.5 44 115585.0 45 124061.5 46 132538.0 47 132538.0 48 141103.5 49 149669.0 50 153081.0 51 156493.0 52 155396.5 53 154300.0 54 154300.0 55 147518.5 56 140737.0 57 131190.5 58 121644.0 59 110478.5 60 99313.0 61 99313.0 62 86797.5 63 74282.0 64 62634.5 65 50987.0 66 42333.5 67 33680.0 68 33680.0 69 27326.5 70 20973.0 71 17158.0 72 13343.0 73 10924.5 74 8506.0 75 8506.0 76 6919.5 77 5333.0 78 4521.0 79 3709.0 80 2965.5 81 2222.0 82 2222.0 83 1789.0 84 1356.0 85 1068.0 86 780.0 87 638.5 88 497.0 89 497.0 90 390.0 91 283.0 92 196.0 93 109.0 94 79.0 95 49.0 96 49.0 97 29.0 98 9.0 99 8.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1725258.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 70.98553159856415 #Duplication Level Percentage of deduplicated Percentage of total 1 86.63051325870778 61.49513036325831 2 7.407514317769517 10.51652683341689 3 2.2859451087359144 4.868070862462693 4 1.1103564425521444 3.152769693538181 5 0.66393514135193 2.356489447791729 6 0.4329065510887635 1.8438060996922108 7 0.27866902760137724 1.3847028345037093 8 0.20997006893549935 1.1923869570538865 9 0.16399155192129505 1.0476924741725997 >10 0.7876620865325588 9.410808568768463 >50 0.023463408422319462 1.1202455229926582 >100 0.004664025581729867 0.5233558844894954 >500 8.180215984224063E-5 0.039253763863630255 >1k 2.4540647952672187E-4 0.5375326806000373 >5k 8.180215984224063E-5 0.5112280133955632 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8804 0.5103004883907218 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3565 0.20663576114413035 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2877 0.16675766754885357 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2815 0.16316400213765128 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 5.796234534197204E-5 8 0.0 0.0 0.0 0.0 5.796234534197204E-5 9 0.0 0.0 0.0 5.796234534197204E-5 1.7388703602591612E-4 10 5.796234534197204E-5 0.0 0.0 1.1592469068394408E-4 1.7388703602591612E-4 11 5.796234534197204E-5 0.0 0.0 1.1592469068394408E-4 1.7388703602591612E-4 12 5.796234534197204E-5 0.0 0.0 2.3184938136788815E-4 1.7388703602591612E-4 13 5.796234534197204E-5 0.0 0.0 2.3184938136788815E-4 2.3184938136788815E-4 14 5.796234534197204E-5 0.0 0.0 2.3184938136788815E-4 2.3184938136788815E-4 15 5.796234534197204E-5 0.0 0.0 2.898117267098602E-4 2.3184938136788815E-4 16 5.796234534197204E-5 0.0 0.0 5.216611080777483E-4 3.4777407205183224E-4 17 5.796234534197204E-5 0.0 0.0 8.114728347876085E-4 4.0573641739380427E-4 18 5.796234534197204E-5 0.0 0.0 9.853598708135247E-4 4.0573641739380427E-4 19 1.1592469068394408E-4 0.0 0.0 0.0011012845614974689 4.0573641739380427E-4 20 1.1592469068394408E-4 0.0 0.0 0.001391096288207329 4.0573641739380427E-4 21 1.1592469068394408E-4 0.0 0.0 0.0023184938136788817 4.0573641739380427E-4 22 1.1592469068394408E-4 0.0 0.0 0.003941439483254099 4.0573641739380427E-4 23 1.1592469068394408E-4 0.0 0.0 0.004926799354067623 5.216611080777483E-4 24 1.1592469068394408E-4 0.0 0.0 0.005854196879539176 5.216611080777483E-4 25 1.1592469068394408E-4 0.0 0.0 0.00654974502364284 5.216611080777483E-4 26 1.1592469068394408E-4 0.0 0.0 0.007187330822404533 5.216611080777483E-4 27 1.1592469068394408E-4 0.0 0.0 0.011766356104420325 5.796234534197204E-4 28 1.1592469068394408E-4 0.0 0.0 0.040573641739380426 5.796234534197204E-4 29 1.1592469068394408E-4 0.0 0.0 0.10091244324037332 5.796234534197204E-4 30 1.1592469068394408E-4 0.0 0.0 0.18124825388434657 5.796234534197204E-4 31 1.1592469068394408E-4 0.0 0.0 0.5615971640183671 5.796234534197204E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGT 60 9.239375E-4 18.5 2 TCTTATA 2000 0.0 17.297499 37 CTTATAC 1075 0.0 16.865116 37 GGTATCA 2060 0.0 16.34466 1 TATAAGA 195 1.8189894E-12 16.128206 2 AACGCAG 3645 0.0 15.886147 5 CGAGTAT 95 7.062953E-5 15.578948 18 GTTATAG 110 1.452628E-5 15.136364 1 ACCGTCC 140 5.9993545E-7 14.535714 8 TATGCCG 90 8.276977E-4 14.388888 10 CTCGTTA 105 1.6563901E-4 14.095238 22 CTCTTAT 3205 0.0 13.968798 37 ATTATAC 200 9.840733E-10 13.875001 3 TCAACGC 4160 0.0 13.875 3 ATCAACG 4205 0.0 13.770512 2 CAACGCA 4195 0.0 13.715137 4 TCTATAG 135 6.5710647E-6 13.703703 3 CTAGAGT 245 7.2759576E-12 13.591836 4 TATCAAC 4285 0.0 13.556594 1 GTATTAG 165 2.5969348E-7 13.454545 1 >>END_MODULE