##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727355.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 990441 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2008660788477 33.0 31.0 34.0 30.0 34.0 2 32.346531494556466 34.0 31.0 34.0 30.0 34.0 3 32.42621115240585 34.0 31.0 34.0 30.0 34.0 4 35.99419955353221 37.0 35.0 37.0 35.0 37.0 5 35.87897310390018 37.0 35.0 37.0 35.0 37.0 6 35.886361731794224 37.0 35.0 37.0 35.0 37.0 7 35.83521481844956 37.0 35.0 37.0 35.0 37.0 8 35.80549775302113 37.0 35.0 37.0 35.0 37.0 9 37.54523086180802 39.0 37.0 39.0 35.0 39.0 10 37.3816623100215 39.0 37.0 39.0 34.0 39.0 11 37.48818253686994 39.0 37.0 39.0 35.0 39.0 12 37.39610840019749 39.0 37.0 39.0 34.0 39.0 13 37.44785706569094 39.0 37.0 39.0 35.0 39.0 14 38.637551353387025 40.0 38.0 41.0 35.0 41.0 15 38.59937744903533 40.0 38.0 41.0 34.0 41.0 16 38.53669224113299 40.0 38.0 41.0 34.0 41.0 17 38.49564486930569 40.0 38.0 41.0 34.0 41.0 18 38.44177694582514 40.0 38.0 41.0 34.0 41.0 19 38.43920940268022 40.0 38.0 41.0 34.0 41.0 20 38.32300561063203 40.0 38.0 41.0 34.0 41.0 21 38.24949694126152 40.0 38.0 41.0 34.0 41.0 22 38.170790587223266 40.0 38.0 41.0 34.0 41.0 23 38.05806807270701 40.0 38.0 41.0 33.0 41.0 24 37.94993543280216 40.0 37.0 41.0 33.0 41.0 25 37.86530343554033 40.0 37.0 41.0 33.0 41.0 26 37.51060689127368 40.0 37.0 41.0 32.0 41.0 27 37.29816617042307 39.0 37.0 41.0 31.0 41.0 28 37.14915880905576 39.0 36.0 41.0 31.0 41.0 29 37.11340503876556 39.0 36.0 41.0 31.0 41.0 30 37.024647606470246 39.0 36.0 40.0 31.0 41.0 31 36.81517929891836 39.0 36.0 40.0 30.0 41.0 32 36.713587179852205 39.0 36.0 40.0 30.0 41.0 33 36.534197392878525 39.0 36.0 40.0 30.0 41.0 34 36.388254323074264 39.0 35.0 40.0 30.0 41.0 35 36.238232262194316 39.0 35.0 40.0 29.0 41.0 36 36.089529815506424 39.0 35.0 40.0 28.0 41.0 37 35.861449596694804 38.0 35.0 40.0 27.0 41.0 38 35.75812693537525 38.0 35.0 40.0 27.0 41.0 39 35.588329844988245 38.0 35.0 40.0 26.0 41.0 40 35.45550113535284 38.0 35.0 40.0 26.0 41.0 41 35.31900133374931 38.0 34.0 40.0 25.0 41.0 42 35.130318716612095 38.0 34.0 40.0 24.0 41.0 43 31.685970189037004 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 2.0 11 3.0 12 2.0 13 2.0 14 2.0 15 9.0 16 28.0 17 48.0 18 103.0 19 202.0 20 402.0 21 744.0 22 1383.0 23 2232.0 24 3490.0 25 4949.0 26 6939.0 27 9341.0 28 11963.0 29 15334.0 30 19492.0 31 24223.0 32 30673.0 33 38558.0 34 49914.0 35 66338.0 36 93263.0 37 146002.0 38 266767.0 39 198032.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.22957248336852 18.814851162260045 12.58399036388841 26.371585990483027 2 18.736906085269087 21.116250236005982 34.57459858790175 25.57224509082318 3 18.37151329559257 21.947193219989884 31.02658310792869 28.654710376488858 4 14.739696761341664 15.629603378696963 33.7993883532689 35.83131150669247 5 14.374404936790782 37.09186110025736 34.267563640842816 14.26617032210904 6 36.229618927326314 35.58929810054309 14.093418992145923 14.087663979984674 7 30.28994155128877 31.08019558964138 20.052481672305568 18.57738118676428 8 28.190068868312196 34.98764691687844 18.57223196535685 18.250052249452516 9 27.17849927456557 13.513374345367366 18.028231868430325 41.27989451163673 10 15.538028009745153 27.709979695913233 33.89358881548724 22.85840347885437 11 37.493904230539734 20.947941371570845 21.093533082737892 20.464621315151533 12 21.763941516960628 25.090237581037133 29.832064706529714 23.31375619547252 13 32.03623436428823 19.579359093575487 23.33051640632809 25.05389013580819 14 22.471505117417394 20.09337254818813 25.484102536142988 31.951019798251483 15 25.648776656055233 28.110003523682884 21.38128369080036 24.859936129461524 16 25.044601344249685 26.18762753157432 23.65693665750913 25.11083446666687 17 24.68587225286514 26.18187251941307 24.824901230865848 24.307353996855944 18 24.724339965732437 25.41948485573598 25.306302949898075 24.549872228633507 19 25.607582884795764 25.40050341211642 25.406359389403306 23.585554313684508 20 25.318822625476933 25.112853769179587 25.157581319836314 24.410742285507165 21 24.939294718211382 25.27056129542295 25.42079740236925 24.36934658399642 22 25.52751754016645 25.0196629582176 24.728580501009144 24.7242390006068 23 24.95383369630296 24.99856124695969 24.96231476685638 25.085290289880973 24 24.852969535792642 24.99603711881879 25.020268748971418 25.130724596417153 25 25.135570922447677 24.65810684331525 25.02047067922269 25.18585155501438 26 24.69405042804165 24.961002220223115 25.30529329864172 25.039654053093518 27 25.13769119008603 25.340429162363026 24.84903189589284 24.6728477516581 28 24.857714896697534 25.32861624266362 24.989979211280634 24.823689649358215 29 24.930712682532327 25.5088389919238 25.05146697279293 24.508981352750947 30 25.116488513702485 25.413628878449096 24.73897990894965 24.730902698898774 31 24.961608010976928 24.751398619402874 25.169697134912628 25.11729623470757 32 24.455368871038257 25.20039053310596 25.118608781340836 25.225631814514948 33 24.624485456478478 24.779567889455304 25.241483339239796 25.354463314826425 34 24.861147710969153 24.628826956880822 25.683508659274 24.82651667287602 35 24.69576683517746 24.647606470249112 25.645242876657974 25.011383817915455 36 24.540886332451908 24.266362155847748 25.910882122206168 25.281869389494176 37 24.228904094236807 23.98335690869017 26.23498017549758 25.552758821575438 38 23.975582594016203 23.782335343548986 26.721934976439787 25.520147085995028 39 23.833019836618234 23.61533902574712 27.241602478088044 25.310038659546606 40 23.86229972305266 23.453592894478316 27.5057272467517 25.178380135717322 41 23.441880939904546 23.373729480100277 27.969762964174542 25.214626615820627 42 22.951796220067628 23.5414325537816 27.949468973921714 25.557302252229057 43 23.038121402486368 22.635876341952727 27.87324030406657 26.452761951494335 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 77.0 1 91.0 2 105.0 3 224.5 4 344.0 5 344.0 6 413.0 7 482.0 8 494.5 9 507.0 10 787.0 11 1067.0 12 1067.0 13 1947.5 14 2828.0 15 4560.5 16 6293.0 17 5032.5 18 3772.0 19 3772.0 20 4551.0 21 5330.0 22 5188.5 23 5047.0 24 6227.5 25 7408.0 26 7408.0 27 9256.5 28 11105.0 29 12959.0 30 14813.0 31 17542.5 32 20272.0 33 20272.0 34 23486.0 35 26700.0 36 30823.0 37 34946.0 38 39696.0 39 44446.0 40 44446.0 41 49534.5 42 54623.0 43 60086.0 44 65549.0 45 70620.0 46 75691.0 47 75691.0 48 80780.5 49 85870.0 50 88290.5 51 90711.0 52 90412.0 53 90113.0 54 90113.0 55 86093.0 56 82073.0 57 76497.5 58 70922.0 59 64921.5 60 58921.0 61 58921.0 62 51754.0 63 44587.0 64 37675.0 65 30763.0 66 25458.5 67 20154.0 68 20154.0 69 16437.0 70 12720.0 71 10424.5 72 8129.0 73 6599.5 74 5070.0 75 5070.0 76 4241.0 77 3412.0 78 2827.0 79 2242.0 80 1818.0 81 1394.0 82 1394.0 83 1096.0 84 798.0 85 648.5 86 499.0 87 422.0 88 345.0 89 345.0 90 266.5 91 188.0 92 133.0 93 78.0 94 56.0 95 34.0 96 34.0 97 22.0 98 10.0 99 6.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 990441.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 74.13971974271402 #Duplication Level Percentage of deduplicated Percentage of total 1 87.38736765999458 64.78874947365509 2 7.1313013810416255 10.574253715825112 3 2.213281563964228 4.922762245920709 4 1.0619961062706327 3.14944374747033 5 0.6259465611947334 2.3203751310446563 6 0.3748906732090493 1.667657366752578 7 0.2613271241769808 1.3562303823355546 8 0.18098414404761398 1.0734490974052067 9 0.14299434970018837 0.9541404910407247 >10 0.6005500165026659 7.229759463781463 >50 0.014863745566001544 0.7403745731752083 >100 0.003951623585532438 0.4065241383342893 >500 0.0 0.0 >1k 5.450507461791892E-4 0.8162801732591013 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4012 0.4050720840514478 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1575 0.1590200728766277 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1276 0.12883150031147741 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1217 0.12287455789895613 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0096512563595408E-4 2 0.0 0.0 0.0 0.0 1.0096512563595408E-4 3 0.0 0.0 0.0 0.0 1.0096512563595408E-4 4 0.0 0.0 0.0 0.0 1.0096512563595408E-4 5 0.0 0.0 0.0 0.0 1.0096512563595408E-4 6 0.0 0.0 0.0 0.0 1.0096512563595408E-4 7 0.0 0.0 0.0 0.0 1.0096512563595408E-4 8 1.0096512563595408E-4 0.0 0.0 0.0 1.0096512563595408E-4 9 1.0096512563595408E-4 0.0 0.0 0.0 2.0193025127190816E-4 10 1.0096512563595408E-4 0.0 0.0 0.0 2.0193025127190816E-4 11 1.0096512563595408E-4 0.0 0.0 1.0096512563595408E-4 2.0193025127190816E-4 12 1.0096512563595408E-4 0.0 0.0 1.0096512563595408E-4 2.0193025127190816E-4 13 1.0096512563595408E-4 0.0 0.0 1.0096512563595408E-4 2.0193025127190816E-4 14 1.0096512563595408E-4 0.0 0.0 1.0096512563595408E-4 3.0289537690786225E-4 15 1.0096512563595408E-4 1.0096512563595408E-4 0.0 1.0096512563595408E-4 3.0289537690786225E-4 16 1.0096512563595408E-4 1.0096512563595408E-4 0.0 2.0193025127190816E-4 5.048256281797704E-4 17 1.0096512563595408E-4 1.0096512563595408E-4 0.0 4.038605025438163E-4 5.048256281797704E-4 18 1.0096512563595408E-4 1.0096512563595408E-4 0.0 4.038605025438163E-4 5.048256281797704E-4 19 1.0096512563595408E-4 1.0096512563595408E-4 0.0 8.077210050876326E-4 5.048256281797704E-4 20 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.001110616381995495 5.048256281797704E-4 21 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.0019183373870831277 5.048256281797704E-4 22 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.0033318491459864846 5.048256281797704E-4 23 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.004139570151074117 6.057907538157245E-4 24 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.005351151658705567 6.057907538157245E-4 25 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.005654047035613429 7.067558794516786E-4 26 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.006663698291972969 7.067558794516786E-4 27 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.009995547437959454 8.077210050876326E-4 28 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.035034898595676066 8.077210050876326E-4 29 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.0912724735749025 8.077210050876326E-4 30 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.1680059690582276 8.077210050876326E-4 31 1.0096512563595408E-4 1.0096512563595408E-4 0.0 0.5000802672748805 8.077210050876326E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 565 0.0 20.955753 37 GTCTAAA 100 2.8739305E-7 18.5 1 TTATACT 110 3.850073E-8 18.5 4 GCTTAAC 130 6.9667294E-10 18.5 1 TCGCGGT 50 0.0070342114 18.5 17 GGCGTCA 145 1.546141E-10 17.862068 12 GGGCGTC 135 1.1514203E-9 17.814816 11 TCTTATA 1055 0.0 17.184835 37 GCGTCAG 140 1.8681021E-9 17.178572 13 AGGGCGT 165 5.4569682E-11 16.818182 10 GGCTTAA 80 3.3819748E-4 16.1875 1 TCTACTA 70 0.002592154 15.857142 2 ATTGGAC 70 0.002592154 15.857142 3 CGAGACG 70 0.002592154 15.857142 23 TTTATAC 155 7.203198E-9 15.516129 3 GGTATCA 1100 0.0 15.472728 1 GTGCAAC 85 5.36322E-4 15.235294 11 TACTTAC 110 1.4513858E-5 15.136364 31 GTATATA 125 2.9575585E-6 14.800001 1 ATTAGGT 75 0.004103872 14.8 3 >>END_MODULE