##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727354.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1632242 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.173732203925645 33.0 31.0 34.0 30.0 34.0 2 32.316149198464444 34.0 31.0 34.0 30.0 34.0 3 32.39417868183762 34.0 31.0 34.0 30.0 34.0 4 35.957688872115774 37.0 35.0 37.0 35.0 37.0 5 35.846295463540336 37.0 35.0 37.0 35.0 37.0 6 35.86480681173502 37.0 35.0 37.0 35.0 37.0 7 35.812932763646565 37.0 35.0 37.0 35.0 37.0 8 35.789884710723044 37.0 35.0 37.0 35.0 37.0 9 37.52716631479891 39.0 37.0 39.0 35.0 39.0 10 37.366300462799025 39.0 37.0 39.0 34.0 39.0 11 37.47442781156226 39.0 37.0 39.0 35.0 39.0 12 37.380809953426024 39.0 37.0 39.0 34.0 39.0 13 37.43861326935589 39.0 37.0 39.0 35.0 39.0 14 38.60288609164572 40.0 38.0 41.0 34.0 41.0 15 38.57186311833662 40.0 38.0 41.0 34.0 41.0 16 38.5003590153911 40.0 38.0 41.0 34.0 41.0 17 38.47272463274441 40.0 38.0 41.0 34.0 41.0 18 38.42514774157264 40.0 38.0 41.0 34.0 41.0 19 38.43995498216564 40.0 38.0 41.0 34.0 41.0 20 38.318771971313076 40.0 38.0 41.0 34.0 41.0 21 38.244978992085734 40.0 38.0 41.0 34.0 41.0 22 38.17054823978307 40.0 38.0 41.0 34.0 41.0 23 38.05881848402382 40.0 38.0 41.0 33.0 41.0 24 37.94609071448964 40.0 37.0 41.0 33.0 41.0 25 37.859289860204555 40.0 37.0 41.0 33.0 41.0 26 37.49426923213592 40.0 37.0 41.0 32.0 41.0 27 37.27823141421431 39.0 37.0 41.0 31.0 41.0 28 37.11861170096101 39.0 36.0 41.0 31.0 41.0 29 37.06863810635923 39.0 36.0 40.0 31.0 41.0 30 36.97446457081732 39.0 36.0 40.0 31.0 41.0 31 36.75376690466242 39.0 36.0 40.0 30.0 41.0 32 36.633434870564535 39.0 36.0 40.0 30.0 41.0 33 36.44829933306458 39.0 35.0 40.0 30.0 41.0 34 36.30035619718154 39.0 35.0 40.0 30.0 41.0 35 36.140452825010016 39.0 35.0 40.0 29.0 41.0 36 35.967013469816365 39.0 35.0 40.0 28.0 41.0 37 35.737005909662905 38.0 35.0 40.0 27.0 41.0 38 35.62105129018859 38.0 35.0 40.0 26.0 41.0 39 35.44932246566379 38.0 35.0 40.0 26.0 41.0 40 35.30299980027471 38.0 34.0 40.0 25.0 41.0 41 35.145472301288656 38.0 34.0 40.0 24.0 41.0 42 34.93224166514524 38.0 34.0 40.0 24.0 41.0 43 31.554400021565428 35.0 29.0 38.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 5.0 12 8.0 13 11.0 14 19.0 15 22.0 16 34.0 17 87.0 18 155.0 19 321.0 20 712.0 21 1350.0 22 2372.0 23 3992.0 24 5960.0 25 8473.0 26 11712.0 27 15797.0 28 20155.0 29 25831.0 30 32687.0 31 41100.0 32 51365.0 33 64879.0 34 83111.0 35 110273.0 36 155434.0 37 246090.0 38 433806.0 39 316476.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.36816599499339 18.610353121657205 12.908073680250846 26.11340720309856 2 18.776688750810237 21.61805663620958 34.30434947758972 25.30090513539046 3 18.503567485703712 22.148799013871717 31.328810311216102 28.018823189208465 4 14.69990356822089 15.760898200144341 33.51396422834359 36.02523400329118 5 14.284585251451684 37.58241731311901 34.0159731216327 14.117024313796605 6 35.96599033721715 35.5340690902452 14.068134504564886 14.431806067972763 7 29.881169581471372 31.385848421986445 20.059954345005213 18.673027651536966 8 28.434876691078898 34.98850047970828 18.616663460442755 17.959959368770072 9 27.430246250249656 13.433547231354174 18.088923088610635 41.04728342978554 10 15.582125689695522 28.100673797145276 33.43407411401005 22.883126399149145 11 37.30721302355901 21.20157427636343 20.92355177724872 20.567660922828846 12 21.562305099366395 25.51227085199376 29.839018969000918 23.086405079638926 13 32.22971838734697 19.62729791293203 23.534132806287303 24.608850893433694 14 22.320771062134167 20.184752015938813 26.08920736018311 31.40526956174391 15 25.775099525683075 28.302727169133007 21.636987652566226 24.285185652617688 16 24.67091276906243 26.256216909012263 23.98394355738916 25.08892676453614 17 24.393074066223022 26.25058048990285 25.16220021295862 24.194145230915513 18 24.378186567923137 25.55380881021319 25.752308787544987 24.315695834318685 19 25.637681177178383 25.275234922272556 25.99577758690194 23.09130631364712 20 24.877683578783046 25.17727150753381 25.710403236774937 24.234641676908204 21 24.48546232727745 25.53922763903882 26.117757048280833 23.8575529854029 22 25.216910237575064 25.017920136842452 25.267638009559857 24.497531616022624 23 24.52877698282485 25.25520112826407 25.538860046488203 24.677161842422876 24 24.256758495370175 25.105652225589097 25.762049990136266 24.875539288904463 25 24.706262919346518 24.794607662344188 25.59369260195486 24.905436816354438 26 24.20933905634091 25.15019218963855 26.01660783143676 24.623860922583784 27 24.8281198498752 25.496096779766724 25.539656497014533 24.136126873343535 28 24.36299274249774 25.69459675709852 25.41669678883401 24.52571371156973 29 24.47835553796557 25.887889173296607 25.65814382916259 23.975611459575237 30 24.849624014086146 25.61109198268394 25.27719541587583 24.26208858735408 31 24.474189489058606 25.051799916924082 25.855234701717023 24.618775892300285 32 24.108679962897657 25.589526553047893 25.624080252805648 24.6777132312488 33 24.224471616341205 24.882401016515935 25.82006834770824 25.073059019434616 34 24.473638100232687 24.958063816517402 26.30216597783907 24.26613210541084 35 24.263252630431026 24.994026621052516 26.11469377702571 24.628026971490748 36 24.048149722896483 24.61969487367682 26.62215529314893 24.710000110277765 37 23.7734968221624 24.44521094298517 26.770233825621446 25.011058409230984 38 23.628236499244597 24.284879325492177 27.100209405223 24.986674770040228 39 23.207955683042098 24.170558042251088 27.746375843778065 24.875110430928746 40 23.63644606620832 23.7913863262923 27.917490176089082 24.654677431410292 41 23.02281156838263 23.871460236901147 28.306403094639155 24.79932510007707 42 22.58978754375883 24.111681968727677 28.24238072540714 25.056149762106354 43 22.633776118982357 23.130454920287555 28.13920974953469 26.096559211195398 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 257.0 1 280.0 2 303.0 3 738.5 4 1174.0 5 1174.0 6 1278.5 7 1383.0 8 1434.0 9 1485.0 10 2213.5 11 2942.0 12 2942.0 13 5470.5 14 7999.0 15 13073.0 16 18147.0 17 13871.5 18 9596.0 19 9596.0 20 11209.5 21 12823.0 22 11237.0 23 9651.0 24 11674.0 25 13697.0 26 13697.0 27 16539.0 28 19381.0 29 22359.5 30 25338.0 31 29744.5 32 34151.0 33 34151.0 34 39266.5 35 44382.0 36 50907.0 37 57432.0 38 64648.0 39 71864.0 40 71864.0 41 80290.0 42 88716.0 43 97537.5 44 106359.0 45 114786.5 46 123214.0 47 123214.0 48 131695.0 49 140176.0 50 143908.5 51 147641.0 52 146586.5 53 145532.0 54 145532.0 55 138332.5 56 131133.0 57 121974.0 58 112815.0 59 102937.5 60 93060.0 61 93060.0 62 81379.5 63 69699.0 64 59331.5 65 48964.0 66 40992.5 67 33021.0 68 33021.0 69 26875.0 70 20729.0 71 17260.5 72 13792.0 73 11494.5 74 9197.0 75 9197.0 76 7608.5 77 6020.0 78 5072.5 79 4125.0 80 3264.5 81 2404.0 82 2404.0 83 1978.5 84 1553.0 85 1226.5 86 900.0 87 763.5 88 627.0 89 627.0 90 482.5 91 338.0 92 237.5 93 137.0 94 97.5 95 58.0 96 58.0 97 38.0 98 18.0 99 13.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1632242.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.79700571572354 #Duplication Level Percentage of deduplicated Percentage of total 1 85.41069559960579 57.90589417750397 2 8.052374800914695 10.918538008055236 3 2.5039973375882183 5.092905654258749 4 1.1886657282249766 3.2235190868221366 5 0.7205374378464721 2.442514039603503 6 0.46303231289615543 1.8835322618391204 7 0.3159933255125782 1.4996380907134728 8 0.23609431323915633 1.2805190003299927 9 0.17199712387907398 1.0494800991645832 >10 0.8894090582368008 10.248545548802714 >50 0.034507271595842444 1.5577110203544524 >100 0.011970342231705674 1.2733970298230917 >500 3.6267411429096385E-4 0.16074548170942377 >1k 2.7200558571822286E-4 0.7362942179409093 >5k 0.0 0.0 >10k+ 9.066852857274096E-5 0.7267662830785917 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11823 0.7243411209857361 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4671 0.2861708006533345 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3805 0.23311494251465165 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3502 0.21455151870862285 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 6.126542510240516E-5 8 6.126542510240516E-5 0.0 0.0 0.0 6.126542510240516E-5 9 6.126542510240516E-5 0.0 0.0 0.0 1.8379627530721546E-4 10 1.8379627530721546E-4 0.0 0.0 0.0 1.8379627530721546E-4 11 1.8379627530721546E-4 0.0 0.0 0.0 1.8379627530721546E-4 12 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.0 1.8379627530721546E-4 13 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.0 1.8379627530721546E-4 14 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.0 3.063271255120258E-4 15 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.0 3.063271255120258E-4 16 1.8379627530721546E-4 6.126542510240516E-5 0.0 3.675925506144309E-4 4.901234008192413E-4 17 1.8379627530721546E-4 6.126542510240516E-5 0.0 6.739196761264567E-4 4.901234008192413E-4 18 1.8379627530721546E-4 6.126542510240516E-5 0.0 9.189813765360774E-4 5.513888259216464E-4 19 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.001164043076945698 5.513888259216464E-4 20 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.0018379627530721548 5.513888259216464E-4 21 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.003124536680222663 5.513888259216464E-4 22 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.005146295708602033 5.513888259216464E-4 23 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.006004011660035706 6.739196761264567E-4 24 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.006984258461674188 6.739196761264567E-4 25 1.8379627530721546E-4 6.126542510240516E-5 0.0 0.007535647287595835 6.739196761264567E-4 26 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.008270832388824697 6.739196761264567E-4 27 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.012743208421300273 6.739196761264567E-4 28 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.03767823643797917 6.739196761264567E-4 29 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.0974732913379266 6.739196761264567E-4 30 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.1793851646998423 6.739196761264567E-4 31 1.8379627530721546E-4 1.2253085020481032E-4 0.0 0.5227778723988232 6.739196761264567E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCCG 75 1.3746103E-8 24.666666 5 TACCCGT 90 9.484393E-8 20.555557 6 CTTATAC 1225 0.0 19.783674 37 ATTTCGT 65 0.0015803188 17.076923 20 GTCTAAA 190 1.8189894E-12 16.552631 1 AACGCAG 4565 0.0 16.169771 5 CGAATAC 70 0.0025931192 15.857142 4 CGAGTTA 75 0.0041053873 14.8 15 CGCAGAG 5035 0.0 14.770605 7 GGAGTGT 605 0.0 14.677686 6 ACGCAGA 5175 0.0 14.263768 6 AGAGTAC 5115 0.0 14.177908 10 AAGACCG 170 2.4383553E-8 14.147059 5 TGTACGG 105 1.656303E-4 14.095239 5 TACTTAC 370 0.0 14.0 31 ATCAACG 5340 0.0 13.96161 2 TCAACGC 5410 0.0 13.917746 3 CTATTAC 120 3.302028E-5 13.875001 1 TAATACC 160 1.7845377E-7 13.875 4 CGCAAAC 80 0.006300117 13.875 21 >>END_MODULE