##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727351.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3355189 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07058976409377 33.0 31.0 34.0 30.0 34.0 2 32.22756035502024 33.0 31.0 34.0 30.0 34.0 3 32.309335480057904 34.0 31.0 34.0 30.0 34.0 4 35.9010037884602 37.0 35.0 37.0 35.0 37.0 5 35.76942193122355 37.0 35.0 37.0 35.0 37.0 6 35.78431796241583 37.0 35.0 37.0 35.0 37.0 7 35.73487723046302 37.0 35.0 37.0 33.0 37.0 8 35.705531640691476 37.0 35.0 37.0 33.0 37.0 9 37.42302534968969 39.0 37.0 39.0 35.0 39.0 10 37.25729936525185 39.0 37.0 39.0 34.0 39.0 11 37.36150959007078 39.0 37.0 39.0 34.0 39.0 12 37.260844620079524 39.0 37.0 39.0 34.0 39.0 13 37.32142034323551 39.0 37.0 39.0 34.0 39.0 14 38.49766823865958 40.0 38.0 41.0 34.0 41.0 15 38.455946296915016 40.0 38.0 41.0 34.0 41.0 16 38.392442571789545 40.0 38.0 41.0 34.0 41.0 17 38.345500357803985 40.0 38.0 41.0 34.0 41.0 18 38.29342043026488 40.0 38.0 41.0 33.0 41.0 19 38.29483137909668 40.0 38.0 41.0 34.0 41.0 20 38.17849098813807 40.0 38.0 41.0 34.0 41.0 21 38.10589776015598 40.0 38.0 41.0 33.0 41.0 22 38.03002573029418 40.0 37.0 41.0 33.0 41.0 23 37.91596598582077 40.0 37.0 41.0 33.0 41.0 24 37.81172476423832 40.0 37.0 41.0 33.0 41.0 25 37.731233024428725 40.0 37.0 41.0 32.0 41.0 26 37.37890533141352 39.0 37.0 41.0 32.0 41.0 27 37.1712234392757 39.0 36.0 41.0 31.0 41.0 28 37.02989459014082 39.0 36.0 40.0 31.0 41.0 29 36.99523007496746 39.0 36.0 40.0 31.0 41.0 30 36.92561164214594 39.0 36.0 40.0 30.0 41.0 31 36.728418279864414 39.0 36.0 40.0 30.0 41.0 32 36.62589976302378 39.0 36.0 40.0 30.0 41.0 33 36.44963845553857 39.0 36.0 40.0 30.0 41.0 34 36.32780388824594 39.0 35.0 40.0 30.0 41.0 35 36.18180734378898 39.0 35.0 40.0 29.0 41.0 36 36.03762410999798 38.0 35.0 40.0 28.0 41.0 37 35.80511381028013 38.0 35.0 40.0 27.0 41.0 38 35.71079691784874 38.0 35.0 40.0 27.0 41.0 39 35.55399919348806 38.0 35.0 40.0 26.0 41.0 40 35.42813147038811 38.0 34.0 40.0 26.0 41.0 41 35.31038013059771 38.0 34.0 40.0 25.0 41.0 42 35.124957789263135 38.0 34.0 40.0 25.0 41.0 43 31.722984308782603 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 5.0 11 7.0 12 6.0 13 9.0 14 16.0 15 38.0 16 62.0 17 133.0 18 292.0 19 667.0 20 1401.0 21 2617.0 22 4980.0 23 8101.0 24 12385.0 25 18096.0 26 24127.0 27 32705.0 28 42789.0 29 54669.0 30 68985.0 31 86708.0 32 108472.0 33 136300.0 34 175171.0 35 230407.0 36 322099.0 37 506302.0 38 912141.0 39 605495.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.16164871785166 18.987365540361512 12.44409778405926 26.406887957727566 2 18.95368636461314 20.925497788649164 34.28292713167574 25.83788871506195 3 18.96677057536848 21.99664460034889 30.340734903458493 28.695849920824134 4 15.209307135902032 15.834011139163845 33.1024869239855 35.85419480094862 5 14.862858694398437 36.5118328654511 33.92261956032879 14.702688879821673 6 36.687858716751876 34.75968119828719 14.148442904408665 14.404017180552273 7 30.323239614817528 30.613595836180913 20.00924538081163 19.05391916818993 8 27.79059540312036 34.83502717730656 18.669440082212954 18.704937337360132 9 26.732592411336594 13.746915598495345 18.380335653222517 41.14015633694555 10 15.819824158937095 27.61981515795384 33.890609441077686 22.66975124203137 11 37.300670692470675 20.933545025332403 21.081882421526778 20.683901860670144 12 21.645039966451964 24.80852792495445 30.018100321621226 23.52833178697236 13 31.704532889205346 19.8057099018863 23.357939001349852 25.131818207558503 14 22.613033125704693 20.11311434318603 25.186241371201447 32.08761115990783 15 25.540439003585192 27.921765361057155 21.499981074091504 25.037814561266146 16 25.340360855975625 26.212740921599348 23.574469277289595 24.87242894513543 17 24.531285718926714 26.360869685731565 24.89514003533035 24.21270456001137 18 24.628597673633287 25.724035218284275 25.16898451920294 24.478382588879494 19 25.261766177702654 25.61813954444891 25.32176279786325 23.798331479985183 20 25.29627988169966 25.21857934083594 25.07852761796727 24.406613159497127 21 24.994478701497886 25.178760421544062 25.085412476018487 24.741348400939557 22 25.483661278097898 25.01802431994144 24.743404916980833 24.754909484979834 23 25.117780250233295 25.03429762078977 24.72179659625732 25.126125532719616 24 25.001482777870336 25.046904958260175 24.806858868457187 25.1447533954123 25 25.237386031010473 24.723406043593968 24.954749195946935 25.08445872944862 26 24.912158450686384 25.0746828271075 25.022107547443678 24.991051174762436 27 25.029171232976744 25.293210009927908 24.906435971267193 24.77118278582816 28 24.978980319737577 25.282003487731984 24.90154802009663 24.837468172433802 29 24.932187128653556 25.467000517705564 25.055607895710196 24.545204457930687 30 25.13077504724771 25.240455902782227 24.897256160532237 24.731512889437823 31 25.117273572368052 24.818214413554646 25.02204793828306 25.04246407579424 32 24.748412086472623 25.009589623714195 25.085233648536644 25.156764641276542 33 24.88014833143528 24.762062584253822 24.999575284730607 25.35821379958029 34 24.990514692316886 24.53167317847072 25.34322209568522 25.13459003352717 35 24.85582779390371 24.54287970066664 25.41829983348181 25.18299267194784 36 24.697476058725755 24.348881687439963 25.726687825931716 25.22695442790257 37 24.43951741615748 23.900054512577384 26.10678563860337 25.553642432661768 38 24.037036363674297 23.87913169720096 26.589947689981102 25.49388424914364 39 23.88163528194686 23.72384983379476 27.006705136431957 25.387809747826427 40 23.975519709917982 23.64197665168788 27.267554823290137 25.11494881510401 41 23.686564303829083 23.551787991674985 27.480001871727644 25.28164583276829 42 23.233713510624888 23.744325580466555 27.525751902500872 25.49620900640769 43 23.574946150574526 23.123943241349444 27.30042927537018 26.00068133270585 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 620.0 1 559.5 2 499.0 3 832.5 4 1166.0 5 1166.0 6 1313.0 7 1460.0 8 1491.5 9 1523.0 10 2374.5 11 3226.0 12 3226.0 13 5695.0 14 8164.0 15 12379.0 16 16594.0 17 13950.0 18 11306.0 19 11306.0 20 14167.5 21 17029.0 22 17129.0 23 17229.0 24 21223.0 25 25217.0 26 25217.0 27 30742.0 28 36267.0 29 42719.5 30 49172.0 31 57917.5 32 66663.0 33 66663.0 34 78360.5 35 90058.0 36 103550.0 37 117042.0 38 132706.5 39 148371.0 40 148371.0 41 166859.0 42 185347.0 43 204417.5 44 223488.0 45 240901.0 46 258314.0 47 258314.0 48 274624.0 49 290934.0 50 297783.0 51 304632.0 52 304854.0 53 305076.0 54 305076.0 55 294235.5 56 283395.0 57 263963.0 58 244531.0 59 222564.5 60 200598.0 61 200598.0 62 175860.0 63 151122.0 64 128923.5 65 106725.0 66 88665.0 67 70605.0 68 70605.0 69 57840.5 70 45076.0 71 36894.0 72 28712.0 73 23239.5 74 17767.0 75 17767.0 76 14589.0 77 11411.0 78 9206.5 79 7002.0 80 5561.0 81 4120.0 82 4120.0 83 3194.5 84 2269.0 85 1765.0 86 1261.0 87 957.5 88 654.0 89 654.0 90 496.5 91 339.0 92 228.5 93 118.0 94 87.0 95 56.0 96 56.0 97 38.0 98 20.0 99 15.5 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3355189.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.66673045966321 #Duplication Level Percentage of deduplicated Percentage of total 1 83.3955693241047 57.26501080308455 2 9.437419392400633 12.960734673055457 3 2.9993877019675796 6.178744406251093 4 1.399162045488096 3.8430353218768842 5 0.7525849733630882 2.5838774756958003 6 0.47903873177898104 1.973641408488371 7 0.31329154409972537 1.5058894209791274 8 0.23239709619928828 1.276635901145996 9 0.16964629633301911 1.0484150853401617 >10 0.7950186654688557 9.022668685083197 >50 0.01979005240549167 0.9060332152730225 >100 0.006389827906910432 0.7466445271579759 >500 1.3043506657266354E-4 0.057471192657279103 >1k 8.695670847704817E-5 0.19611857437383706 >5k 8.695670847704817E-5 0.43507930953720925 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 9521 0.283769409115254 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5052 0.1505727397174943 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3391 0.10106733182542027 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.9609160616585236E-5 2 0.0 2.9804580308292618E-5 0.0 0.0 5.9609160616585236E-5 3 0.0 2.9804580308292618E-5 0.0 0.0 5.9609160616585236E-5 4 0.0 2.9804580308292618E-5 0.0 0.0 5.9609160616585236E-5 5 0.0 2.9804580308292618E-5 0.0 0.0 5.9609160616585236E-5 6 0.0 2.9804580308292618E-5 0.0 0.0 8.941374092487785E-5 7 0.0 2.9804580308292618E-5 0.0 0.0 8.941374092487785E-5 8 0.0 2.9804580308292618E-5 0.0 0.0 1.1921832123317047E-4 9 0.0 2.9804580308292618E-5 0.0 2.9804580308292618E-5 1.4902290154146308E-4 10 0.0 2.9804580308292618E-5 0.0 2.9804580308292618E-5 1.788274818497557E-4 11 5.9609160616585236E-5 2.9804580308292618E-5 0.0 2.9804580308292618E-5 1.788274818497557E-4 12 5.9609160616585236E-5 2.9804580308292618E-5 0.0 2.9804580308292618E-5 2.086320621580483E-4 13 5.9609160616585236E-5 2.9804580308292618E-5 0.0 2.9804580308292618E-5 2.086320621580483E-4 14 5.9609160616585236E-5 2.9804580308292618E-5 0.0 2.9804580308292618E-5 2.3843664246634094E-4 15 5.9609160616585236E-5 2.9804580308292618E-5 0.0 2.9804580308292618E-5 2.6824122277463355E-4 16 1.1921832123317047E-4 2.9804580308292618E-5 0.0 5.9609160616585236E-5 3.278503833912188E-4 17 1.1921832123317047E-4 8.941374092487785E-5 0.0 1.1921832123317047E-4 3.576549636995114E-4 18 1.1921832123317047E-4 8.941374092487785E-5 0.0 1.1921832123317047E-4 3.576549636995114E-4 19 1.1921832123317047E-4 8.941374092487785E-5 0.0 1.788274818497557E-4 3.576549636995114E-4 20 1.1921832123317047E-4 8.941374092487785E-5 0.0 2.3843664246634094E-4 3.576549636995114E-4 21 1.1921832123317047E-4 8.941374092487785E-5 0.0 3.576549636995114E-4 3.87459544007804E-4 22 1.1921832123317047E-4 8.941374092487785E-5 0.0 5.364824455492671E-4 3.87459544007804E-4 23 1.1921832123317047E-4 8.941374092487785E-5 0.0 6.25896186474145E-4 5.662870258575598E-4 24 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.0011921832123317046 5.662870258575598E-4 25 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.0013412061138731678 5.960916061658523E-4 26 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.0020863206215804833 6.25896186474145E-4 27 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.006914662631523887 6.557007667824376E-4 28 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.030341062753841883 6.557007667824376E-4 29 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.07215688892637642 6.557007667824376E-4 30 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.13274960069313532 6.557007667824376E-4 31 1.1921832123317047E-4 8.941374092487785E-5 0.0 0.39672876848368305 6.557007667824376E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1640 0.0 18.951218 37 TCTTATA 3050 0.0 15.891804 37 GGTATCA 2595 0.0 15.256262 1 AACGCAG 4745 0.0 13.879873 5 GTATTAG 320 0.0 13.875001 1 GCGCTTA 80 0.0063019437 13.875001 13 TCGCGTA 95 0.0012459458 13.6315775 23 CTCTTAT 4935 0.0 13.457954 37 CTAATAC 320 0.0 13.296876 3 TATACTG 565 0.0 12.442477 5 TCAACGC 5220 0.0 12.439655 3 CAACGCA 5215 0.0 12.416108 4 TATCAAC 5240 0.0 12.392176 1 ATCAACG 5210 0.0 12.357005 2 GTATAAG 435 0.0 12.333333 1 ACGCAGA 5555 0.0 11.955895 6 TAGACAG 620 0.0 11.935483 5 CGCGAAT 140 1.3998397E-4 11.892858 28 TTATACG 140 1.3998397E-4 11.892858 4 ATCGCGT 110 0.0037476155 11.772727 22 >>END_MODULE