##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727350.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4229917 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.102262526664234 33.0 31.0 34.0 30.0 34.0 2 32.25087158920612 33.0 31.0 34.0 30.0 34.0 3 32.321546262018856 34.0 31.0 34.0 30.0 34.0 4 35.91502173683313 37.0 35.0 37.0 35.0 37.0 5 35.78432413685658 37.0 35.0 37.0 35.0 37.0 6 35.794952714202196 37.0 35.0 37.0 35.0 37.0 7 35.73815372736628 37.0 35.0 37.0 35.0 37.0 8 35.69992153510341 37.0 35.0 37.0 33.0 37.0 9 37.434768578201414 39.0 37.0 39.0 35.0 39.0 10 37.253819874006986 39.0 37.0 39.0 34.0 39.0 11 37.36855333095188 39.0 37.0 39.0 34.0 39.0 12 37.25938972324989 39.0 37.0 39.0 34.0 39.0 13 37.31270660866395 39.0 37.0 39.0 34.0 39.0 14 38.476107214396876 40.0 38.0 41.0 34.0 41.0 15 38.425282103644115 40.0 38.0 41.0 34.0 41.0 16 38.34521977618 40.0 38.0 41.0 34.0 41.0 17 38.28389327733854 40.0 38.0 41.0 33.0 41.0 18 38.22177976541857 40.0 38.0 41.0 33.0 41.0 19 38.20754520715182 40.0 38.0 41.0 34.0 41.0 20 38.07029239580824 40.0 38.0 41.0 33.0 41.0 21 37.97487350224603 40.0 37.0 41.0 33.0 41.0 22 37.89617337645159 40.0 37.0 41.0 33.0 41.0 23 37.76453485966746 40.0 37.0 41.0 32.0 41.0 24 37.62301246100101 40.0 37.0 41.0 32.0 41.0 25 37.52144616549214 39.0 37.0 41.0 32.0 41.0 26 37.11365920418769 39.0 36.0 41.0 31.0 41.0 27 36.87835553274449 39.0 36.0 40.0 30.0 41.0 28 36.689257496069075 39.0 36.0 40.0 30.0 41.0 29 36.63970333224032 39.0 36.0 40.0 30.0 41.0 30 36.546071944201266 39.0 36.0 40.0 30.0 41.0 31 36.314310659050754 39.0 35.0 40.0 29.0 41.0 32 36.19932518770463 39.0 35.0 40.0 29.0 41.0 33 36.00280856574727 39.0 35.0 40.0 27.0 41.0 34 35.82998484367424 38.0 35.0 40.0 27.0 41.0 35 35.65439652834795 38.0 35.0 40.0 26.0 41.0 36 35.48951858866261 38.0 35.0 40.0 25.0 41.0 37 35.23731434919409 38.0 34.0 40.0 25.0 41.0 38 35.121923432540164 38.0 34.0 40.0 24.0 41.0 39 34.930931505275396 38.0 34.0 40.0 24.0 41.0 40 34.798290604756545 38.0 33.0 40.0 24.0 41.0 41 34.65036547998459 38.0 33.0 40.0 23.0 41.0 42 34.45359022411078 38.0 33.0 40.0 23.0 41.0 43 30.785399571670084 35.0 27.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 5.0 11 5.0 12 20.0 13 16.0 14 41.0 15 74.0 16 147.0 17 300.0 18 647.0 19 1326.0 20 2617.0 21 4961.0 22 8634.0 23 13792.0 24 20965.0 25 29012.0 26 39177.0 27 50279.0 28 63744.0 29 78873.0 30 97268.0 31 119561.0 32 146213.0 33 180028.0 34 228138.0 35 296359.0 36 405729.0 37 617101.0 38 1098545.0 39 726338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.19046922197292 17.133551320274133 11.71410691982845 27.961872537924503 2 20.12916565502349 19.841736847318753 32.762037647547224 27.267059850110538 3 19.071508968142876 20.418249341535542 29.775052323721717 30.73518936659986 4 15.619786392971777 14.810597938446545 31.646412920158955 37.923202748422725 5 15.423092226159522 35.934038422030504 33.3503707046734 15.292498647136574 6 38.64238943695585 33.3861160869114 13.238912252888177 14.73258222324457 7 32.05876143669013 29.953495541401875 18.59301258157075 19.394730440337245 8 29.39821277817035 33.568223679093464 17.69171830085555 19.34184524188063 9 28.165328066720928 12.68989438799863 16.47086692244789 42.67391062283255 10 16.382425470759827 26.450779057839668 32.43474990171202 24.73204556968848 11 39.519475204832624 19.576601621261126 19.63854137090633 21.265381802999915 12 23.229391971520954 23.539398054382627 28.155209664870494 25.076000309225925 13 33.498718769186254 18.202390259667034 21.94728643611683 26.35160453502988 14 23.75346844867169 18.770912053357076 23.441145535479773 34.03447396249146 15 27.429001561969184 26.21370584812894 19.921289235698953 26.43600335420293 16 26.88896732489077 24.614525533243324 22.010053625165696 26.48645351670021 17 26.542601190519814 24.51161571255417 22.815152164924278 26.130630932001743 18 26.478793791934923 23.91415718086194 23.26440447885857 26.34264454834457 19 27.727754468941118 23.847725617311166 23.15095071605424 25.27356919769348 20 27.00849685703053 23.4833449450663 22.996810575715788 26.511347622187387 21 26.72690740740303 23.71909425173118 23.388733159539537 26.16526518132625 22 27.487182372609205 23.360269244053725 22.41661006587127 26.735938317465802 23 26.812653770747747 23.297691184011413 22.90158412091774 26.9880709243231 24 26.62116065161562 23.34270388757037 22.95376008559979 27.08237537521422 25 26.961380093273696 22.777799186130604 22.986030222342425 27.274790498253275 26 26.542577549393997 23.14494587009627 23.284002972162337 27.028473608347397 27 27.115094693347412 23.523534858958225 22.880685365693935 26.480685082000427 28 26.669837729676495 23.621172708589793 22.76656965136668 26.94241991036704 29 26.783977085129568 23.82089293950685 22.994801080021194 26.40032889534239 30 27.1129433508979 23.57883145224835 22.761415885938188 26.54680931091556 31 26.883411660323357 22.822102655914996 23.150005071021486 27.144480612740157 32 26.31479530213004 23.44393518832639 23.026669317624908 27.21460019191866 33 26.43425391089234 22.95489485963909 23.287974681299893 27.322876548168672 34 26.82421428127313 22.89456270654956 23.72278226735891 26.558440744818395 35 26.55955187773188 22.97446971181704 23.58743682204639 26.87854158840469 36 26.29869569544745 22.56413069098046 24.013142574665178 27.12403103890691 37 26.065783323880826 22.30431471823206 24.29423556065048 27.335666397236636 38 25.893344952158635 22.042607455418157 24.62010483893656 27.44394275348665 39 25.503290017274573 22.022701627478742 25.24609820949205 27.227910145754635 40 25.895827270369608 21.554749183021794 25.6120864782926 26.937337068315998 41 25.251157410417274 21.57113248321421 26.066705327787755 27.11100477858076 42 24.720886958302017 21.540328096272336 26.29354193001896 27.445243015406685 43 24.85055853341803 20.445743970862786 26.177203949864737 28.526493545854446 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 48.0 1 59.5 2 71.0 3 197.0 4 323.0 5 323.0 6 393.0 7 463.0 8 467.5 9 472.0 10 680.0 11 888.0 12 888.0 13 1774.5 14 2661.0 15 4668.5 16 6676.0 17 5126.5 18 3577.0 19 3577.0 20 4402.0 21 5227.0 22 5264.0 23 5301.0 24 7136.0 25 8971.0 26 8971.0 27 11829.5 28 14688.0 29 18675.0 30 22662.0 31 29385.5 32 36109.0 33 36109.0 34 45663.0 35 55217.0 36 69269.5 37 83322.0 38 103264.0 39 123206.0 40 123206.0 41 151159.0 42 179112.0 43 208868.5 44 238625.0 45 273069.0 46 307513.0 47 307513.0 48 343260.0 49 379007.0 50 404605.0 51 430203.0 52 437780.5 53 445358.0 54 445358.0 55 434744.5 56 424131.0 57 402682.5 58 381234.0 59 351286.0 60 321338.0 61 321338.0 62 283483.5 63 245629.0 64 211061.0 65 176493.0 66 146393.0 67 116293.0 68 116293.0 69 95279.0 70 74265.0 71 60789.0 72 47313.0 73 39726.5 74 32140.0 75 32140.0 76 26840.5 77 21541.0 78 18154.0 79 14767.0 80 12132.0 81 9497.0 82 9497.0 83 7832.5 84 6168.0 85 5010.0 86 3852.0 87 3427.0 88 3002.0 89 3002.0 90 2248.0 91 1494.0 92 1075.5 93 657.0 94 469.5 95 282.0 96 282.0 97 180.5 98 79.0 99 60.5 100 42.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4229917.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.511632301594304 #Duplication Level Percentage of deduplicated Percentage of total 1 82.18261742877789 48.08639092575247 2 9.281763500152366 10.861822660625483 3 3.085678830748699 5.416443154367439 4 1.5194745783302466 3.556277512755178 5 0.8800857286214027 2.5747626273488113 6 0.5727788655059933 2.0108535821166615 7 0.4067195996761917 1.6658479366273478 8 0.310447565355556 1.453183503440757 9 0.23085371024484216 1.21568646683745 >10 1.4012676222217226 15.102529956111157 >50 0.09223530611693874 3.6718389706190417 >100 0.03385047387328899 3.297007305413626 >500 0.0019433807459872943 0.775386303239996 >1k 2.834096287983377E-4 0.31196909474458717 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4559 0.10777989260782185 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.7282251637561685E-5 2 0.0 0.0 0.0 0.0 4.7282251637561685E-5 3 0.0 0.0 0.0 0.0 4.7282251637561685E-5 4 0.0 0.0 0.0 0.0 4.7282251637561685E-5 5 2.3641125818780842E-5 0.0 0.0 0.0 4.7282251637561685E-5 6 9.456450327512337E-5 0.0 0.0 0.0 4.7282251637561685E-5 7 9.456450327512337E-5 0.0 0.0 0.0 7.092337745634252E-5 8 1.182056290939042E-4 0.0 0.0 0.0 7.092337745634252E-5 9 1.182056290939042E-4 0.0 0.0 0.0 1.654878807314659E-4 10 1.4184675491268504E-4 2.3641125818780842E-5 0.0 0.0 1.654878807314659E-4 11 1.4184675491268504E-4 2.3641125818780842E-5 0.0 0.0 1.654878807314659E-4 12 1.4184675491268504E-4 2.3641125818780842E-5 0.0 0.0 1.8912900655024674E-4 13 1.4184675491268504E-4 2.3641125818780842E-5 0.0 0.0 1.8912900655024674E-4 14 1.654878807314659E-4 2.3641125818780842E-5 0.0 0.0 2.1277013236902756E-4 15 1.654878807314659E-4 2.3641125818780842E-5 0.0 0.0 2.6005238400658926E-4 16 1.654878807314659E-4 2.3641125818780842E-5 0.0 9.456450327512337E-5 3.546168872817126E-4 17 1.654878807314659E-4 2.3641125818780842E-5 0.0 2.836935098253701E-4 3.546168872817126E-4 18 1.654878807314659E-4 2.3641125818780842E-5 0.0 3.0733463564415096E-4 3.546168872817126E-4 19 1.654878807314659E-4 2.3641125818780842E-5 0.0 4.49181390556836E-4 3.546168872817126E-4 20 1.8912900655024674E-4 2.3641125818780842E-5 0.0 6.855926487446444E-4 3.546168872817126E-4 21 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.0010638506618451378 3.546168872817126E-4 22 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.0017021610589522205 3.546168872817126E-4 23 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.0021749835753278376 5.201047680131785E-4 24 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.002955140727347605 5.201047680131785E-4 25 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.003286116488810537 5.673870196507402E-4 26 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.004018991389192743 5.673870196507402E-4 27 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.007115978871453033 5.673870196507402E-4 28 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.02676175442685991 5.673870196507402E-4 29 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.07472959871316624 5.673870196507402E-4 30 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.14135029127049065 5.673870196507402E-4 31 1.8912900655024674E-4 2.3641125818780842E-5 0.0 0.40173365103854286 5.673870196507402E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1940 0.0 21.170101 37 TCTTATA 3555 0.0 16.860758 37 GTCTTAG 555 0.0 16.666666 1 GGTATCA 3515 0.0 16.263159 1 GTATATG 270 0.0 15.074075 1 GTACCGT 265 0.0 14.660377 6 CGCTACG 625 0.0 14.504 10 CGAACGT 170 2.4419933E-8 14.147059 4 TTACCGT 325 0.0 13.661538 17 TCGTTAC 465 0.0 13.526881 23 GTATAAT 250 1.0913936E-11 13.320001 1 TGCGTTA 310 0.0 13.129032 13 GTATCAA 4325 0.0 13.089018 2 AACGCAG 6510 0.0 13.043778 5 ACCGCTA 695 0.0 13.043165 8 TAAGACT 470 0.0 12.989362 4 CTCTTAT 5675 0.0 12.97445 37 GTATAGA 360 0.0 12.847222 1 TCAACGC 6665 0.0 12.573894 3 CAACGCA 6720 0.0 12.443452 4 >>END_MODULE