##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727349.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4268163 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10548472492733 33.0 31.0 34.0 30.0 34.0 2 32.255609731868255 33.0 31.0 34.0 30.0 34.0 3 32.335781927728625 34.0 31.0 34.0 30.0 34.0 4 35.91681878128834 37.0 35.0 37.0 35.0 37.0 5 35.79507413376668 37.0 35.0 37.0 35.0 37.0 6 35.81002459371866 37.0 35.0 37.0 35.0 37.0 7 35.75776089151234 37.0 35.0 37.0 35.0 37.0 8 35.73183849820168 37.0 35.0 37.0 33.0 37.0 9 37.4525314520556 39.0 37.0 39.0 35.0 39.0 10 37.29274022571303 39.0 37.0 39.0 34.0 39.0 11 37.39562242585394 39.0 37.0 39.0 34.0 39.0 12 37.30026922589414 39.0 37.0 39.0 34.0 39.0 13 37.362292630342374 39.0 37.0 39.0 34.0 39.0 14 38.526571501603854 40.0 38.0 41.0 34.0 41.0 15 38.49382837534555 40.0 38.0 41.0 34.0 41.0 16 38.430699108726635 40.0 38.0 41.0 34.0 41.0 17 38.390638080129555 40.0 38.0 41.0 34.0 41.0 18 38.34452339331933 40.0 38.0 41.0 34.0 41.0 19 38.347454162364464 40.0 38.0 41.0 34.0 41.0 20 38.23305693807851 40.0 38.0 41.0 34.0 41.0 21 38.15630518328377 40.0 38.0 41.0 33.0 41.0 22 38.081774993129365 40.0 38.0 41.0 33.0 41.0 23 37.97243169953912 40.0 37.0 41.0 33.0 41.0 24 37.86293400697209 40.0 37.0 41.0 33.0 41.0 25 37.77924343564199 40.0 37.0 41.0 33.0 41.0 26 37.41850978980887 39.0 37.0 41.0 32.0 41.0 27 37.206684936821766 39.0 37.0 41.0 31.0 41.0 28 37.05763111671227 39.0 36.0 40.0 31.0 41.0 29 37.01593284979978 39.0 36.0 40.0 31.0 41.0 30 36.93322747983149 39.0 36.0 40.0 30.0 41.0 31 36.7266210311087 39.0 36.0 40.0 30.0 41.0 32 36.62076143764894 39.0 36.0 40.0 30.0 41.0 33 36.44191798673106 39.0 35.0 40.0 30.0 41.0 34 36.306904164625394 39.0 35.0 40.0 30.0 41.0 35 36.15098743885836 39.0 35.0 40.0 29.0 41.0 36 36.00102081387239 38.0 35.0 40.0 28.0 41.0 37 35.75876905357176 38.0 35.0 40.0 27.0 41.0 38 35.65655903956807 38.0 35.0 40.0 27.0 41.0 39 35.487097610845694 38.0 35.0 40.0 26.0 41.0 40 35.348115336738545 38.0 34.0 40.0 25.0 41.0 41 35.21493227882815 38.0 34.0 40.0 25.0 41.0 42 35.008602998526534 38.0 34.0 40.0 24.0 41.0 43 31.603643534700993 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 8.0 11 10.0 12 14.0 13 18.0 14 31.0 15 42.0 16 97.0 17 184.0 18 366.0 19 797.0 20 1793.0 21 3444.0 22 6225.0 23 10384.0 24 16054.0 25 22659.0 26 32018.0 27 42227.0 28 54993.0 29 70022.0 30 88150.0 31 110386.0 32 137243.0 33 171832.0 34 221063.0 35 289645.0 36 404947.0 37 636011.0 38 1143622.0 39 803875.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.14175981563966 18.872568831134142 12.750239388701884 26.235431964524313 2 18.738108174406648 21.303731839669666 34.34341659397732 25.61474339194637 3 18.684384827852167 22.095665043720214 30.744912975441657 28.475037152985955 4 14.910958180369398 15.76444011158899 33.29762710561898 36.026974602422634 5 14.618724730053657 37.032676587093796 33.87356574713758 14.475032935714967 6 36.32499508570783 35.22046838417371 14.068652017273006 14.385884512845456 7 30.21192021017004 30.867096687731937 20.0045312233858 18.916451878712223 8 28.082643516660443 35.007941355566786 18.61313637740639 18.296278750366376 9 26.923948312189577 13.7094576753512 18.238056981422687 41.12853703103654 10 15.732388852065865 27.83077872143121 33.561745416002154 22.87508701050077 11 37.323223129013584 21.108237900005225 20.969841123687168 20.598697847294023 12 21.647298849645622 25.1480086397825 29.92287314237999 23.28181936819189 13 31.871838071788726 19.629592403101757 23.54181412471829 24.956755400391224 14 22.456171425505538 20.136695810352133 25.584753909351633 31.82237885479069 15 25.537051888599382 28.170878197482146 21.48184125114247 24.810228662775998 16 25.009283853498566 26.168681936467745 23.71146556492805 25.110568645105637 17 24.503445627545155 26.326970174288096 25.1005643411463 24.069019857020457 18 24.516847177579677 25.58283270812291 25.465217706071673 24.435102408225738 19 25.376491010301155 25.483398829894732 25.65469031993389 23.485419839870218 20 25.071254307766594 25.30458653992362 25.359106482109517 24.26505267020027 21 24.806479977451655 25.394414412008164 25.4391643430675 24.35994126747268 22 25.283945341356457 25.10014261404731 24.980700127900455 24.63521191669578 23 24.81531281724714 25.150351568110214 25.113099007699564 24.921236606943083 24 24.771031471853348 25.070012555752907 25.2046840760299 24.954271896363846 25 24.976342281210908 24.86451431212913 25.242522368522476 24.916621038137485 26 24.58083255020954 25.176943804629765 25.51926906259203 24.72295458256866 27 24.86692752830667 25.46479597897269 25.16021529636989 24.50806119635075 28 24.724805495947557 25.48311767849541 25.214618092139407 24.577458733417632 29 24.65360390406833 25.728375415840492 25.317332070026378 24.3006886100648 30 24.791438377587735 25.547243626824933 25.150679578076097 24.51063841751123 31 24.724219763865626 24.975264534180162 25.39326637712758 24.90724932482663 32 24.298345681737086 25.372062875761774 25.384902122997644 24.944689319503496 33 24.464225007339223 24.99614002558009 25.41025260750351 25.129382359577175 34 24.67832179792571 24.771710921068387 25.78577715986948 24.764190121136423 35 24.495807681196805 24.865428054176938 25.720901474475085 24.917862790151172 36 24.36329165498131 24.560472503041705 26.063133015304242 25.01310282667274 37 24.065997479477705 24.207861789720777 26.377741431149655 25.348399299651863 38 23.706193976190693 24.265497826582536 26.767370412048464 25.260937785178307 39 23.5175179579599 24.010634083093827 27.336748854249475 25.1350991046968 40 23.701180109569385 23.8790786574927 27.574064064563608 24.845677168374312 41 23.247659473173822 23.837397962542667 27.861096213991825 25.053846350291682 42 22.912831585860243 24.078368141048035 27.80737286743735 25.201427405654375 43 23.08065554197438 23.222098125118464 27.740693127230614 25.956553205676542 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 468.0 1 514.5 2 561.0 3 1283.0 4 2005.0 5 2005.0 6 2348.0 7 2691.0 8 2772.5 9 2854.0 10 4395.5 11 5937.0 12 5937.0 13 11259.5 14 16582.0 15 26380.0 16 36178.0 17 27416.0 18 18654.0 19 18654.0 20 22237.0 21 25820.0 22 23912.5 23 22005.0 24 27119.5 25 32234.0 26 32234.0 27 39800.0 28 47366.0 29 55330.5 30 63295.0 31 74849.0 32 86403.0 33 86403.0 34 100962.0 35 115521.0 36 133212.0 37 150903.0 38 172182.5 39 193462.0 40 193462.0 41 215602.5 42 237743.0 43 260853.0 44 283963.0 45 305850.0 46 327737.0 47 327737.0 48 348677.0 49 369617.0 50 377570.0 51 385523.0 52 382797.0 53 380071.0 54 380071.0 55 364925.5 56 349780.0 57 326556.0 58 303332.0 59 276472.5 60 249613.0 61 249613.0 62 218534.0 63 187455.0 64 159914.5 65 132374.0 66 109852.5 67 87331.0 68 87331.0 69 71616.0 70 55901.0 71 46100.0 72 36299.0 73 29474.0 74 22649.0 75 22649.0 76 18520.5 77 14392.0 78 11719.5 79 9047.0 80 7213.0 81 5379.0 82 5379.0 83 4247.5 84 3116.0 85 2448.0 86 1780.0 87 1469.5 88 1159.0 89 1159.0 90 856.5 91 554.0 92 407.0 93 260.0 94 187.0 95 114.0 96 114.0 97 68.0 98 22.0 99 17.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4268163.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.08296540971446 #Duplication Level Percentage of deduplicated Percentage of total 1 82.41640462469013 50.34238392882979 2 9.340897488093102 11.411394363217594 3 3.035409978472683 5.562355281580471 4 1.466568843740509 3.583294958126658 5 0.8742314918356975 2.67003259879415 6 0.5735007712206416 2.1018676662549014 7 0.3918304267122753 1.6753915080937698 8 0.29088069193175276 1.421428419489685 9 0.2168728237403593 1.192251167175552 >10 1.3080630263800765 14.43336439383648 >50 0.06928084993000656 2.835399120979981 >100 0.015444932810211491 1.4596033500449386 >500 3.4540345063497664E-4 0.15019619813252366 >1k 1.1513442512864778E-4 0.10038081508248116 >5k 1.151344251286278E-4 0.5202595584131733 >10k+ 3.83781417095426E-5 0.5403966719479326 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23052 0.5400918381045897 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8346 0.1955407982309954 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7701 0.18042891051724125 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6146 0.14399637502129137 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.34292832771382E-5 2 0.0 0.0 0.0 0.0 2.34292832771382E-5 3 0.0 0.0 0.0 0.0 2.34292832771382E-5 4 0.0 0.0 0.0 0.0 2.34292832771382E-5 5 0.0 0.0 0.0 0.0 2.34292832771382E-5 6 0.0 0.0 0.0 0.0 4.68585665542764E-5 7 0.0 0.0 0.0 0.0 4.68585665542764E-5 8 0.0 0.0 0.0 2.34292832771382E-5 4.68585665542764E-5 9 0.0 0.0 0.0 2.34292832771382E-5 7.028784983141459E-5 10 2.34292832771382E-5 0.0 0.0 4.68585665542764E-5 7.028784983141459E-5 11 2.34292832771382E-5 0.0 0.0 4.68585665542764E-5 7.028784983141459E-5 12 2.34292832771382E-5 0.0 0.0 7.028784983141459E-5 7.028784983141459E-5 13 2.34292832771382E-5 0.0 0.0 7.028784983141459E-5 7.028784983141459E-5 14 4.68585665542764E-5 0.0 2.34292832771382E-5 7.028784983141459E-5 1.4057569966282918E-4 15 4.68585665542764E-5 0.0 2.34292832771382E-5 1.4057569966282918E-4 1.4057569966282918E-4 16 4.68585665542764E-5 0.0 2.34292832771382E-5 2.577221160485202E-4 2.1086354949424377E-4 17 4.68585665542764E-5 0.0 2.34292832771382E-5 5.154442320970404E-4 2.1086354949424377E-4 18 4.68585665542764E-5 0.0 2.34292832771382E-5 5.623027986513167E-4 2.3429283277138198E-4 19 4.68585665542764E-5 0.0 2.34292832771382E-5 8.434541979769751E-4 2.3429283277138198E-4 20 4.68585665542764E-5 0.0 2.34292832771382E-5 0.0012417520136883244 2.3429283277138198E-4 21 4.68585665542764E-5 0.0 2.34292832771382E-5 0.001991489078556747 2.3429283277138198E-4 22 4.68585665542764E-5 0.0 2.34292832771382E-5 0.0030458068260279655 2.3429283277138198E-4 23 4.68585665542764E-5 0.0 2.34292832771382E-5 0.0035378217748478677 3.5143924915707295E-4 24 4.68585665542764E-5 0.0 2.34292832771382E-5 0.004662427372150502 3.748685324342112E-4 25 4.68585665542764E-5 0.0 2.34292832771382E-5 0.0052013008875246795 3.9829781571134936E-4 26 4.68585665542764E-5 0.0 2.34292832771382E-5 0.006302477201550175 4.2172709898848754E-4 27 4.68585665542764E-5 0.0 2.34292832771382E-5 0.010988333856977815 4.2172709898848754E-4 28 4.68585665542764E-5 0.0 2.34292832771382E-5 0.03685426259493838 4.2172709898848754E-4 29 4.68585665542764E-5 0.0 2.34292832771382E-5 0.09235823467847877 4.2172709898848754E-4 30 7.028784983141459E-5 0.0 2.34292832771382E-5 0.16625419413457265 4.2172709898848754E-4 31 7.028784983141459E-5 0.0 2.34292832771382E-5 0.4786836866352105 4.2172709898848754E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2330 0.0 19.690989 37 AACGCAG 9030 0.0 16.2464 5 TCTTATA 4210 0.0 15.687649 37 TAGATCG 140 6.005357E-7 14.535714 5 TCGTTAC 410 0.0 14.439025 23 ACGCAGA 10515 0.0 14.057537 6 CGCAGAG 10660 0.0 13.866323 7 CTCGTTA 415 0.0 13.819277 22 TTATACT 715 0.0 13.713286 4 CTCTTAT 6670 0.0 13.618441 37 TTAGTAC 205 1.4279067E-9 13.536586 3 AGAGTAC 10945 0.0 13.505254 10 GAGTACT 6925 0.0 13.41083 11 CAGAGTA 11305 0.0 13.353382 9 GGACCGT 250 1.0913936E-11 13.32 6 GCAGAGT 11630 0.0 12.900688 8 AGTACTT 7240 0.0 12.8529005 12 ATCAACG 11510 0.0 12.826238 2 TAGACAG 880 0.0 12.823864 5 CAACGCA 11550 0.0 12.781817 4 >>END_MODULE