##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727348.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3120732 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13150344214114 33.0 31.0 34.0 30.0 34.0 2 32.275454925318805 34.0 31.0 34.0 30.0 34.0 3 32.35382339784384 34.0 31.0 34.0 30.0 34.0 4 35.92695175362704 37.0 35.0 37.0 35.0 37.0 5 35.811663096991346 37.0 35.0 37.0 35.0 37.0 6 35.82606260326103 37.0 35.0 37.0 35.0 37.0 7 35.77424623453728 37.0 35.0 37.0 35.0 37.0 8 35.75000288393877 37.0 35.0 37.0 35.0 37.0 9 37.477135813007976 39.0 37.0 39.0 35.0 39.0 10 37.3152154686785 39.0 37.0 39.0 34.0 39.0 11 37.42153795968382 39.0 37.0 39.0 35.0 39.0 12 37.32814192311291 39.0 37.0 39.0 34.0 39.0 13 37.390965324802 39.0 37.0 39.0 34.0 39.0 14 38.55242039367687 40.0 38.0 41.0 34.0 41.0 15 38.51929803648631 40.0 38.0 41.0 34.0 41.0 16 38.458920535310305 40.0 38.0 41.0 34.0 41.0 17 38.42719720885997 40.0 38.0 41.0 34.0 41.0 18 38.379858635730336 40.0 38.0 41.0 34.0 41.0 19 38.397298133899355 40.0 38.0 41.0 34.0 41.0 20 38.283121395877636 40.0 38.0 41.0 34.0 41.0 21 38.20929032034792 40.0 38.0 41.0 34.0 41.0 22 38.1364413861876 40.0 38.0 41.0 33.0 41.0 23 38.024904413451715 40.0 37.0 41.0 33.0 41.0 24 37.92103070689825 40.0 37.0 41.0 33.0 41.0 25 37.83563599822093 40.0 37.0 41.0 33.0 41.0 26 37.4857789774963 39.0 37.0 41.0 32.0 41.0 27 37.2796209350883 39.0 37.0 41.0 31.0 41.0 28 37.13230485668106 39.0 36.0 41.0 31.0 41.0 29 37.08600289931977 39.0 36.0 40.0 31.0 41.0 30 37.00776772885336 39.0 36.0 40.0 31.0 41.0 31 36.79416656092224 39.0 36.0 40.0 30.0 41.0 32 36.68451183888908 39.0 36.0 40.0 30.0 41.0 33 36.50557689670244 39.0 35.0 40.0 30.0 41.0 34 36.369098980623775 39.0 35.0 40.0 30.0 41.0 35 36.21621690039388 39.0 35.0 40.0 29.0 41.0 36 36.07196644889724 39.0 35.0 40.0 29.0 41.0 37 35.842756122602005 38.0 35.0 40.0 27.0 41.0 38 35.73413320977258 38.0 35.0 40.0 27.0 41.0 39 35.57008355731924 38.0 35.0 40.0 26.0 41.0 40 35.430799889256754 38.0 34.0 40.0 26.0 41.0 41 35.29519452487429 38.0 34.0 40.0 25.0 41.0 42 35.1015188103304 38.0 34.0 40.0 24.0 41.0 43 31.76103074535077 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 16.0 11 14.0 12 9.0 13 10.0 14 14.0 15 28.0 16 64.0 17 125.0 18 277.0 19 577.0 20 1153.0 21 2309.0 22 4212.0 23 6946.0 24 10907.0 25 15892.0 26 21978.0 27 29619.0 28 38316.0 29 49914.0 30 62965.0 31 79087.0 32 98904.0 33 124430.0 34 160746.0 35 211679.0 36 295817.0 37 467710.0 38 831823.0 39 605187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.904495483751894 19.162747714318307 13.128682629588187 25.80407417234162 2 18.32066963776447 21.684399685714762 34.96503384462363 25.02989683189713 3 18.444679004797592 22.48177671136131 31.234691091705407 27.838853192135694 4 14.621857948712034 15.913862516871042 33.86279244741298 35.601487087003946 5 14.228232350615178 37.57432551080964 34.14106049478135 14.056381643793827 6 35.65602557348724 35.80137608740513 14.227655562861532 14.314942776246086 7 29.6846380913196 31.40971413117179 20.313695632947653 18.591952144560956 8 27.899223643683595 35.61286262325633 18.729740330153312 17.758173402906756 9 27.03362544428679 13.863990884189992 18.403342549119888 40.69904112240334 10 15.555228709161826 28.327104025593997 33.72929812620885 22.38836913903533 11 37.04967296134368 21.4002355857536 21.242836616537403 20.307254836365317 12 21.374953055885605 25.579094904656984 30.20204875010094 22.843903289356472 13 31.71486689661272 19.89997859476559 23.865330313529004 24.519824195092692 14 22.121220277806618 20.449240755053623 26.233973311389764 31.195565655749995 15 25.32008515950745 28.635685473792687 21.907328152497556 24.136901214202307 16 24.41532948039114 26.59818273405086 24.2774772072706 24.7090105782874 17 24.039456127600833 26.735778657058663 25.51080964337854 23.71395557196196 18 24.020037606561537 26.033155041829932 26.009859225335596 23.936948126272938 19 25.095906985925097 25.891233210669807 26.170238264612276 22.84262153879282 20 24.58099574074288 25.702783834049193 25.86713630007319 23.849084125134745 21 24.294364270946687 26.042896346113668 26.032225772671286 23.630513610268363 22 24.887141862870635 25.564354773175012 25.38744115162725 24.16106221232711 23 24.21053778408399 25.678462617103936 25.722202355088484 24.388797243723587 24 24.117482693163016 25.565059735985017 25.81288620746671 24.504571363385256 25 24.45772338028386 25.292110953455794 25.7917052794024 24.458460386857954 26 23.99078164994623 25.62014296645787 26.064750193223894 24.324325190372004 27 24.404434600600116 26.02059388630616 25.667022993323364 23.90794851977036 28 24.187690580286933 26.182735332607866 25.569609950485976 24.05996413661923 29 24.10806182652019 26.32853445922303 25.853325437749863 23.71007827650692 30 24.4480461635283 25.994414131043612 25.54093078162431 24.016608923803776 31 24.1662212583458 25.522729923620485 25.852428212355306 24.458620605678412 32 23.722735563322964 25.975924879162964 25.862489954279955 24.438849603234114 33 23.94576016139803 25.40016252597147 25.88572168324611 24.768355629384388 34 24.116425248948005 25.267212948756896 26.492374225021564 24.123987577273535 35 23.953290445959475 25.251703766936735 26.31023746992693 24.484768317176865 36 23.719851624554753 24.82007426462766 26.796565677539757 24.663508433277833 37 23.411270176356062 24.433498294630876 27.144400736750224 25.01083079226284 38 23.156137726661566 24.296799597017625 27.576254545407934 24.970808130912875 39 22.870243263439473 24.157697617097526 28.280608523897598 24.6914505955654 40 23.077117804412556 24.029810954609367 28.35267494933881 24.54039629163927 41 22.51654419540031 24.055381878354183 28.763123523583566 24.66495040266194 42 22.071232005824275 24.32893949240114 28.68346272605273 24.91636577572185 43 22.06008077592052 23.588279929196098 28.609858199935147 25.741781094948234 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 752.0 1 734.0 2 716.0 3 1395.0 4 2074.0 5 2074.0 6 2310.0 7 2546.0 8 2801.0 9 3056.0 10 4547.0 11 6038.0 12 6038.0 13 10427.5 14 14817.0 15 23333.5 16 31850.0 17 25311.5 18 18773.0 19 18773.0 20 21664.5 21 24556.0 22 22797.0 23 21038.0 24 25356.0 25 29674.0 26 29674.0 27 35693.0 28 41712.0 29 47777.5 30 53843.0 31 62344.0 32 70845.0 33 70845.0 34 81106.0 35 91367.0 36 103897.5 37 116428.0 38 131632.5 39 146837.0 40 146837.0 41 163171.0 42 179505.0 43 195763.5 44 212022.0 45 228089.0 46 244156.0 47 244156.0 48 258081.5 49 272007.0 50 276521.0 51 281035.0 52 275092.5 53 269150.0 54 269150.0 55 254471.0 56 239792.0 57 223029.5 58 206267.0 59 188123.0 60 169979.0 61 169979.0 62 148000.0 63 126021.0 64 106756.0 65 87491.0 66 72277.0 67 57063.0 68 57063.0 69 46708.0 70 36353.0 71 29983.0 72 23613.0 73 19369.5 74 15126.0 75 15126.0 76 12288.0 77 9450.0 78 7820.5 79 6191.0 80 4932.0 81 3673.0 82 3673.0 83 2938.0 84 2203.0 85 1727.0 86 1251.0 87 1022.0 88 793.0 89 793.0 90 587.5 91 382.0 92 279.5 93 177.0 94 125.0 95 73.0 96 73.0 97 49.0 98 25.0 99 18.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3120732.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.66278623086224 #Duplication Level Percentage of deduplicated Percentage of total 1 84.20547608934876 55.29166175922888 2 8.63845150304352 11.344495888200344 3 2.744216181918509 5.40578641573764 4 1.3033578624891358 3.423284348277506 5 0.7430475538897497 2.4395286345213862 6 0.5094732771566639 2.007206093296491 7 0.3323094746072322 1.5274256195537381 8 0.2568150654486909 1.349055419473783 9 0.19018541846386497 1.123929402913786 >10 1.0284635523674135 11.81603208064052 >50 0.03733426901145945 1.656991748175584 >100 0.010285019042681441 1.1264041757536254 >500 2.923666062067831E-4 0.14897342228076635 >1k 9.745553539276568E-5 0.08578130264256352 >5k 1.461833030891485E-4 0.6324651284354917 >10k+ 4.872776769638284E-5 0.6209785608679124 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19408 0.621905373482888 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7602 0.24359669462164646 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6217 0.19921608135527175 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5948 0.1905963088147268 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.204376409124526E-5 2 0.0 0.0 0.0 0.0 3.204376409124526E-5 3 0.0 0.0 0.0 0.0 3.204376409124526E-5 4 0.0 0.0 0.0 0.0 3.204376409124526E-5 5 0.0 0.0 0.0 0.0 3.204376409124526E-5 6 3.204376409124526E-5 0.0 0.0 0.0 6.408752818249051E-5 7 3.204376409124526E-5 0.0 0.0 0.0 6.408752818249051E-5 8 3.204376409124526E-5 0.0 0.0 0.0 6.408752818249051E-5 9 3.204376409124526E-5 0.0 0.0 0.0 1.2817505636498103E-4 10 9.613129227373578E-5 0.0 0.0 0.0 1.2817505636498103E-4 11 9.613129227373578E-5 0.0 0.0 0.0 1.2817505636498103E-4 12 9.613129227373578E-5 0.0 0.0 3.204376409124526E-5 1.602188204562263E-4 13 9.613129227373578E-5 0.0 0.0 6.408752818249051E-5 1.602188204562263E-4 14 9.613129227373578E-5 0.0 0.0 1.602188204562263E-4 3.204376409124526E-4 15 9.613129227373578E-5 0.0 0.0 2.2430634863871682E-4 3.204376409124526E-4 16 9.613129227373578E-5 0.0 0.0 5.127002254599241E-4 4.1656893318618834E-4 17 9.613129227373578E-5 0.0 0.0 9.292691586461126E-4 4.1656893318618834E-4 18 9.613129227373578E-5 0.0 0.0 0.001121531743193584 4.4861269727743363E-4 19 1.2817505636498103E-4 0.0 0.0 0.0012817505636498103 4.4861269727743363E-4 20 1.602188204562263E-4 0.0 0.0 0.002146932194113432 4.4861269727743363E-4 21 1.602188204562263E-4 0.0 0.0 0.0033966389936719976 4.4861269727743363E-4 22 1.9226258454747155E-4 0.0 0.0 0.005383352367329204 4.4861269727743363E-4 23 1.9226258454747155E-4 0.0 0.0 0.006408752818249052 5.127002254599241E-4 24 2.2430634863871682E-4 0.0 0.0 0.008235247371450032 5.127002254599241E-4 25 2.2430634863871682E-4 3.204376409124526E-5 0.0 0.009549041699191086 5.447439895511694E-4 26 2.2430634863871682E-4 3.204376409124526E-5 0.0 0.010862836026932143 5.447439895511694E-4 27 2.2430634863871682E-4 3.204376409124526E-5 0.0 0.01893786457792595 5.447439895511694E-4 28 2.2430634863871682E-4 3.204376409124526E-5 0.0 0.06030636401972358 5.447439895511694E-4 29 2.2430634863871682E-4 3.204376409124526E-5 0.0 0.1442289821746949 5.447439895511694E-4 30 2.5635011272996205E-4 3.204376409124526E-5 0.0 0.25442748688448735 5.447439895511694E-4 31 2.5635011272996205E-4 3.204376409124526E-5 0.0 0.706052297986498 5.447439895511694E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2385 0.0 20.012579 37 AACGCAG 8355 0.0 15.256134 5 TCTTATA 4190 0.0 15.232697 37 TCGTTAC 310 0.0 14.322581 23 GGTATCA 5400 0.0 14.149075 1 TAGGTCG 105 1.6570673E-4 14.095239 5 CTCGTTA 355 0.0 14.070423 22 CGTGATA 80 0.0063018138 13.875 34 GTATTAC 215 1.9826984E-10 13.767442 1 GTCTTAG 525 0.0 13.742858 1 ACGCAGA 9460 0.0 13.532769 6 CGCAGAG 9450 0.0 13.370899 7 GTATCGA 125 4.8495884E-5 13.32 9 GTCTTAT 320 0.0 13.296875 1 GTGTATA 390 0.0 13.28205 1 GGACCGT 265 1.8189894E-12 13.264152 6 TATACCG 155 1.8902756E-6 13.129032 5 GAGTACT 5855 0.0 13.112724 11 AGAGTAC 9675 0.0 12.964342 10 TATACAC 785 0.0 12.961783 37 >>END_MODULE