##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727345.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5821294 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.955765333274698 33.0 31.0 34.0 30.0 34.0 2 32.10952461772245 33.0 31.0 34.0 30.0 34.0 3 32.18530209949884 34.0 31.0 34.0 30.0 34.0 4 35.8065194783153 37.0 35.0 37.0 35.0 37.0 5 35.65822753497762 37.0 35.0 37.0 33.0 37.0 6 35.67211018718518 37.0 35.0 37.0 33.0 37.0 7 35.617277876705764 37.0 35.0 37.0 33.0 37.0 8 35.58197163723392 37.0 35.0 37.0 33.0 37.0 9 37.282008089610315 39.0 37.0 39.0 34.0 39.0 10 37.08856381416228 39.0 37.0 39.0 33.0 39.0 11 37.21065282048974 39.0 37.0 39.0 34.0 39.0 12 37.10327909911439 39.0 37.0 39.0 33.0 39.0 13 37.17122258384476 39.0 37.0 39.0 34.0 39.0 14 38.28620183072698 40.0 38.0 41.0 34.0 41.0 15 38.24135407007446 40.0 38.0 41.0 33.0 41.0 16 38.16848728135016 40.0 38.0 41.0 33.0 41.0 17 38.12138246238723 40.0 38.0 41.0 33.0 41.0 18 38.06647800300071 40.0 37.0 41.0 33.0 41.0 19 38.06938457325811 40.0 37.0 41.0 33.0 41.0 20 37.94077605425873 40.0 37.0 41.0 33.0 41.0 21 37.85482282805163 40.0 37.0 41.0 33.0 41.0 22 37.776848068487865 40.0 37.0 41.0 32.0 41.0 23 37.65539122401308 39.0 37.0 41.0 32.0 41.0 24 37.537952730097466 39.0 37.0 41.0 32.0 41.0 25 37.44480265040728 39.0 37.0 41.0 32.0 41.0 26 37.061149119079026 39.0 36.0 40.0 31.0 41.0 27 36.82269543506993 39.0 36.0 40.0 30.0 41.0 28 36.659154648433834 39.0 36.0 40.0 30.0 41.0 29 36.611230767592225 39.0 36.0 40.0 30.0 41.0 30 36.52242748777162 39.0 36.0 40.0 30.0 41.0 31 36.298848503442706 39.0 35.0 40.0 30.0 41.0 32 36.18352672103487 38.0 35.0 40.0 29.0 41.0 33 35.990903397079755 38.0 35.0 40.0 28.0 41.0 34 35.83882123115582 38.0 35.0 40.0 27.0 41.0 35 35.67066360159786 38.0 35.0 40.0 27.0 41.0 36 35.507421889359996 38.0 34.0 40.0 26.0 41.0 37 35.24695110743419 38.0 34.0 40.0 25.0 41.0 38 35.135267691341475 38.0 34.0 40.0 25.0 41.0 39 34.956839664858016 38.0 34.0 40.0 24.0 41.0 40 34.815745949268326 38.0 33.0 40.0 24.0 41.0 41 34.66669128891274 38.0 33.0 40.0 24.0 41.0 42 34.454006274206385 38.0 33.0 40.0 23.0 41.0 43 31.071464866746123 35.0 27.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 9.0 11 27.0 12 25.0 13 22.0 14 45.0 15 109.0 16 187.0 17 400.0 18 747.0 19 1687.0 20 3322.0 21 6376.0 22 11005.0 23 17895.0 24 26813.0 25 38180.0 26 51653.0 27 67841.0 28 86900.0 29 109923.0 30 136122.0 31 168474.0 32 207360.0 33 258823.0 34 326169.0 35 427485.0 36 595880.0 37 927792.0 38 1546132.0 39 803884.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.02428188646717 18.920363754175618 12.844343542861775 26.21101081649544 2 19.058666337759266 21.437570409603087 34.01899989933509 25.484763353302547 3 18.75241140543666 22.073940948524502 30.794682419407092 28.378965226631742 4 15.111004529233535 15.751807072448154 33.16979008447263 35.967398313845685 5 14.583303987051677 37.13418356812077 33.860907901232956 14.4216045435946 6 36.39670148939394 35.34308694939647 13.899263634511502 14.360947926698083 7 30.355261218553814 30.965280228073 19.86544572392324 18.814012829449947 8 28.382916238210953 34.82880266827272 18.44931728237742 18.338963811138896 9 27.25928290170536 13.506636153405069 17.87119839678257 41.362882548107 10 15.71030427255521 27.771729103529214 33.35480049624706 23.16316612766852 11 37.725409505171875 20.919077442231917 20.812846765684743 20.54266628691147 12 21.830335317199236 25.06562973799296 29.58812937467168 23.515905570136127 13 32.20491870020652 19.44426788957919 23.314953685555135 25.035859724659154 14 22.592691590563884 19.975782016850548 25.40708302999299 32.02444336259258 15 25.91444445169751 28.013513833865805 21.19951337279993 24.87252834163676 16 25.218671312598197 26.05939504172096 23.46466266778486 25.257270977895978 17 24.79690941567287 26.149959098441002 24.66388057363191 24.38925091225422 18 24.741200152405977 25.35963653442001 25.18172076517695 24.71744254799706 19 25.85122826643011 25.29416999038358 25.231228658095606 23.623373085090705 20 25.296403170841398 25.04362432132787 25.04491269466892 24.615059813161817 21 25.004079848913317 25.27896718495922 25.242927088032317 24.474025878095144 22 25.606471688253507 24.85304813672012 24.642854320706014 24.897625854320363 23 25.020794345724507 24.938956871101166 24.82283148729475 25.217417295879574 24 24.938991227723594 24.95091297570609 24.91425445957548 25.195841336994835 25 25.268505593429914 24.5881070428671 24.950724014282734 25.192663349420247 26 24.86259927775508 24.909427354124357 25.180106003922837 25.047867364197717 27 25.2283942367453 25.287298665897996 24.81685343499229 24.667453662364416 28 24.946429436479242 25.282626165247795 24.8339630329614 24.93698136531156 29 24.90477203178537 25.55208515495008 25.014163517595918 24.528979295668627 30 25.17642984532305 25.386022420444665 24.721307668020202 24.716240066212084 31 25.044174027286715 24.713354109928137 25.06545795488082 25.17701390790433 32 24.600080325783235 25.238477905427896 24.99061205292157 25.1708297158673 33 24.772602105305108 24.754221312306164 25.077087671572677 25.39608891081605 34 25.012497221408157 24.65690617927904 25.521335977877087 24.809260621435715 35 24.824978776196495 24.76758603843063 25.37872163817873 25.028713547194148 36 24.637065229826906 24.398802053289184 25.730842661442626 25.23329005544128 37 24.352403434700257 24.13750276141353 26.047335867248762 25.462757936637452 38 24.125649726675892 24.06434033395324 26.364395957324955 25.445613982045916 39 23.802491336118738 23.979531011489886 26.877872857821643 25.34010479456973 40 24.066693762589555 23.731338771070487 27.162895397483787 25.039072068856168 41 23.635793004098403 23.626946173823207 27.47765359385731 25.259607228221082 42 23.23871634038755 23.798694929340453 27.45573406874829 25.506854661523708 43 23.400261179043696 22.96712724009473 27.325299151700637 26.30731242916094 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 534.0 1 597.5 2 661.0 3 1531.0 4 2401.0 5 2401.0 6 2815.0 7 3229.0 8 3450.5 9 3672.0 10 5367.5 11 7063.0 12 7063.0 13 13510.0 14 19957.0 15 32566.0 16 45175.0 17 34742.0 18 24309.0 19 24309.0 20 28908.0 21 33507.0 22 30831.5 23 28156.0 24 35013.0 25 41870.0 26 41870.0 27 52187.5 28 62505.0 29 72136.0 30 81767.0 31 96945.0 32 112123.0 33 112123.0 34 129743.5 35 147364.0 36 171181.5 37 194999.0 38 222516.5 39 250034.0 40 250034.0 41 282361.5 42 314689.0 43 346828.0 44 378967.0 45 411567.0 46 444167.0 47 444167.0 48 473264.5 49 502362.0 50 518409.5 51 534457.0 52 530953.5 53 527450.0 54 527450.0 55 506529.5 56 485609.0 57 453539.0 58 421469.0 59 386063.5 60 350658.0 61 350658.0 62 308014.5 63 265371.0 64 226059.5 65 186748.0 66 155373.0 67 123998.0 68 123998.0 69 101871.0 70 79744.0 71 66028.0 72 52312.0 73 43159.5 74 34007.0 75 34007.0 76 28297.0 77 22587.0 78 18733.0 79 14879.0 80 12148.0 81 9417.0 82 9417.0 83 7501.0 84 5585.0 85 4445.0 86 3305.0 87 2768.5 88 2232.0 89 2232.0 90 1683.0 91 1134.0 92 816.0 93 498.0 94 362.5 95 227.0 96 227.0 97 145.5 98 64.0 99 48.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5821294.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.93743595117699 #Duplication Level Percentage of deduplicated Percentage of total 1 81.49230246609565 45.58470449711167 2 9.530112656318202 10.661801326406012 3 3.240045851538177 5.4371957189788045 4 1.5158580744067995 3.3917285579281935 5 0.9229544655899911 2.581385315239645 6 0.596560989789832 2.0022055294403684 7 0.4188450622020593 1.64003831882761 8 0.31478838333985837 1.40867640249983 9 0.25557087367197634 1.2866381439311267 >10 1.557078626542986 16.434995721588884 >50 0.11332371072599018 4.320031495339465 >100 0.041175673789458855 3.7314085952789537 >500 0.0010757986600012635 0.3920465684731566 >1k 1.8442039750187538E-4 0.14497424530397574 >5k 6.147346581190343E-5 0.299078154218455 >10k+ 6.147346581190343E-5 0.6830914094337004 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29147 0.5006962369535021 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10583 0.18179806757741493 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9288 0.1595521545553274 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8107 0.13926456901163212 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.7178311213967205E-5 2 0.0 0.0 0.0 0.0 1.7178311213967205E-5 3 0.0 0.0 0.0 0.0 1.7178311213967205E-5 4 0.0 0.0 0.0 0.0 1.7178311213967205E-5 5 0.0 0.0 0.0 0.0 1.7178311213967205E-5 6 0.0 0.0 0.0 0.0 3.435662242793441E-5 7 0.0 0.0 0.0 0.0 3.435662242793441E-5 8 1.7178311213967205E-5 0.0 0.0 0.0 3.435662242793441E-5 9 3.435662242793441E-5 0.0 0.0 1.7178311213967205E-5 8.589155606983602E-5 10 5.153493364190161E-5 0.0 0.0 5.153493364190161E-5 8.589155606983602E-5 11 5.153493364190161E-5 0.0 0.0 6.871324485586882E-5 1.0306986728380322E-4 12 5.153493364190161E-5 0.0 0.0 6.871324485586882E-5 1.0306986728380322E-4 13 5.153493364190161E-5 0.0 0.0 8.589155606983602E-5 1.0306986728380322E-4 14 5.153493364190161E-5 0.0 0.0 8.589155606983602E-5 1.8896142335363925E-4 15 5.153493364190161E-5 0.0 0.0 1.7178311213967204E-4 2.0613973456760643E-4 16 5.153493364190161E-5 0.0 0.0 3.2638791306537686E-4 2.9203129063744244E-4 17 5.153493364190161E-5 0.0 0.0 6.699541373447209E-4 2.9203129063744244E-4 18 5.153493364190161E-5 0.0 0.0 6.871324485586882E-4 3.2638791306537686E-4 19 6.871324485586882E-5 1.7178311213967205E-5 0.0 9.104504943402618E-4 3.435662242793441E-4 20 8.589155606983602E-5 1.7178311213967205E-5 0.0 0.001271195029833573 3.435662242793441E-4 21 1.0306986728380322E-4 1.7178311213967205E-5 0.0 0.002044219034462097 3.435662242793441E-4 22 1.0306986728380322E-4 1.7178311213967205E-5 0.0 0.0033841273091515392 3.435662242793441E-4 23 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.0038651200231426207 3.951011579212457E-4 24 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.005050423496906358 3.951011579212457E-4 25 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.005634486078181243 4.294577803491801E-4 26 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.006476223327665636 4.466360915631473E-4 27 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.010547483085375862 4.466360915631473E-4 28 1.2024817849777043E-4 1.7178311213967205E-5 0.0 0.03385845140272936 4.466360915631473E-4 29 1.3742648971173764E-4 1.7178311213967205E-5 0.0 0.08690507643146009 4.466360915631473E-4 30 1.5460480092570483E-4 1.7178311213967205E-5 0.0 0.15517168519576574 4.466360915631473E-4 31 1.5460480092570483E-4 1.7178311213967205E-5 0.0 0.4479416432154088 4.466360915631473E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 3120 0.0 19.389421 37 TCTTATA 5435 0.0 15.657774 37 AACGCAG 13365 0.0 15.406284 5 GTCTTAG 720 0.0 14.645833 1 TCTATAC 590 0.0 14.110169 3 ACGCAGA 15265 0.0 13.476581 6 CGCAGAG 15370 0.0 13.396552 7 AGAGTAC 15600 0.0 13.163463 10 GAGTACT 8625 0.0 13.084059 11 CAGAGTA 16020 0.0 13.003122 9 ATACCCG 285 0.0 12.982456 5 TAGGGTG 830 0.0 12.927711 5 CTCTTAT 8415 0.0 12.926917 37 AGTACTT 8930 0.0 12.657894 12 CAACGCA 16360 0.0 12.619804 4 GCAGAGT 16665 0.0 12.610862 8 TCAACGC 16380 0.0 12.604397 3 ATCAACG 16410 0.0 12.592628 2 GGTATCA 8835 0.0 12.438031 1 TATCAAC 16660 0.0 12.359243 1 >>END_MODULE