##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727344.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3147762 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99358369533656 33.0 31.0 34.0 30.0 34.0 2 32.13117573692039 33.0 31.0 34.0 30.0 34.0 3 32.18929258311143 34.0 31.0 34.0 30.0 34.0 4 35.78073342266664 37.0 35.0 37.0 35.0 37.0 5 35.67664200787734 37.0 35.0 37.0 35.0 37.0 6 35.7164664927018 37.0 35.0 37.0 35.0 37.0 7 35.65653311781514 37.0 35.0 37.0 33.0 37.0 8 35.65028073914102 37.0 35.0 37.0 33.0 37.0 9 37.347684481863624 39.0 37.0 39.0 34.0 39.0 10 37.17330662229228 39.0 37.0 39.0 34.0 39.0 11 37.30856017704007 39.0 37.0 39.0 34.0 39.0 12 37.202120109461895 39.0 37.0 39.0 34.0 39.0 13 37.276145401081784 39.0 37.0 39.0 34.0 39.0 14 38.29973136469657 40.0 38.0 41.0 34.0 41.0 15 38.29386275074164 40.0 38.0 41.0 34.0 41.0 16 38.189333246922736 40.0 38.0 41.0 33.0 41.0 17 38.216566246113906 40.0 38.0 41.0 33.0 41.0 18 38.18658367436928 40.0 38.0 41.0 33.0 41.0 19 38.23129385258479 40.0 38.0 41.0 34.0 41.0 20 38.10049139674474 40.0 38.0 41.0 33.0 41.0 21 38.017159492998516 40.0 37.0 41.0 33.0 41.0 22 37.93775196472922 40.0 37.0 41.0 33.0 41.0 23 37.80633319799909 40.0 37.0 41.0 33.0 41.0 24 37.682506809599964 40.0 37.0 41.0 32.0 41.0 25 37.58076849520389 40.0 37.0 41.0 32.0 41.0 26 37.18272569527175 39.0 36.0 41.0 31.0 41.0 27 36.92207320629704 39.0 36.0 40.0 31.0 41.0 28 36.69240527079239 39.0 36.0 40.0 30.0 41.0 29 36.61061192046921 39.0 36.0 40.0 30.0 41.0 30 36.489959215468005 39.0 35.0 40.0 30.0 41.0 31 36.19221021157254 39.0 35.0 40.0 30.0 41.0 32 36.04040553256568 38.0 35.0 40.0 29.0 41.0 33 35.81010953178798 38.0 35.0 40.0 28.0 41.0 34 35.59641167280118 38.0 35.0 40.0 27.0 41.0 35 35.40158499912001 38.0 35.0 40.0 26.0 41.0 36 35.18559027016655 38.0 34.0 40.0 25.0 41.0 37 34.923066928185804 38.0 34.0 40.0 24.0 41.0 38 34.75575758268891 38.0 34.0 40.0 24.0 41.0 39 34.504289396720594 38.0 33.0 40.0 23.0 41.0 40 34.320415901837556 38.0 33.0 40.0 22.0 41.0 41 34.082110718662975 38.0 33.0 40.0 21.0 41.0 42 33.812499801446236 38.0 33.0 40.0 19.0 41.0 43 30.687324518181487 35.0 27.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 25.0 11 33.0 12 23.0 13 42.0 14 48.0 15 96.0 16 203.0 17 348.0 18 673.0 19 1239.0 20 2307.0 21 4123.0 22 6926.0 23 10459.0 24 15642.0 25 21839.0 26 29718.0 27 38694.0 28 49461.0 29 61173.0 30 75163.0 31 91441.0 32 112783.0 33 140284.0 34 178293.0 35 228563.0 36 320373.0 37 501890.0 38 781041.0 39 474849.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.39272219437174 18.089836525124838 14.174959860370636 25.342481420132778 2 19.28938719000992 23.33016282679567 33.41154763288966 23.968902350304756 3 19.440573969696565 22.509802202326608 32.451976991907266 25.597646836069565 4 15.026199566549186 16.020207372730212 32.09817006495408 36.85542299576652 5 14.682844509845408 38.55818832554685 32.51738854462313 14.24157861998461 6 35.39209762364499 35.017101038769766 13.716062396076959 15.874738941508285 7 28.71020744262114 32.10852662939574 19.675471017186176 19.505794910796943 8 29.84463247221359 34.415848466307175 18.197627393684783 17.541891667794452 9 28.73393858874972 13.113412005100766 17.85763980885467 40.295009597294836 10 16.25176871694874 29.192899590248565 31.420005705641024 23.13532598716167 11 37.22133376030335 21.602109689360248 19.66241412152507 21.51414242881133 12 21.705834176789732 27.12981476998579 28.33298705556519 22.83136399765929 13 33.68415401164383 19.335388126548324 23.18116808068717 23.799289781120684 14 21.97110200834752 21.433863170087193 27.2125719797113 29.38246284185399 15 26.9363439802628 28.537449781781472 21.99842300656784 22.527783231387886 16 23.123603372808997 26.10298999733779 25.439629806827835 25.33377682302537 17 24.49680121940604 25.557237173585552 25.446809511011313 24.499152095997093 18 23.72981184727435 25.262424541626714 27.08857912383465 23.919184487264285 19 26.567002206647132 24.717180015515787 26.83373139392368 21.882086383913396 20 24.125330949417396 24.514845785672488 27.14121969831264 24.218603566597473 21 23.68028459584937 25.69193604853226 28.13595818235305 22.491821173265322 22 24.885077080160446 24.810960930337174 25.91835087913254 24.385611110369844 23 23.374352952986914 25.31973510068423 27.318170814693104 23.987741131635744 24 22.717759474826877 25.094400402571733 27.628867747942827 24.558972374658566 25 23.57481283527789 24.550744306589888 27.0902310911689 24.78421176696332 26 22.989158646682945 25.19485272393529 27.743330023044944 24.07265860633682 27 24.82830658734682 25.799313925258645 26.9366934348912 22.435686052503335 28 23.078301345527393 26.976054733490017 26.08542196011007 23.86022196087252 29 23.24883520418634 26.41085952495773 27.198371414357247 23.14193385649868 30 24.56732751713757 25.811703680265534 26.23644989678381 23.38451890581308 31 23.433855545622574 25.042744654773774 27.478189265897484 24.045210533706168 32 22.851632366106458 26.135298666163454 26.761267211434664 24.251801756295425 33 23.400689124527204 24.745517609018723 26.978024386850088 24.875768879603985 34 23.501014371480437 25.740542010482372 27.98550208052578 22.77294153751141 35 23.639271329916305 25.593453380528768 26.87080535313661 23.89646993641832 36 22.93432603862681 24.827004074640968 28.18643849185548 24.052231394876742 37 22.262547168432683 25.36363930945224 28.174493497284736 24.19932002483034 38 23.34328325966194 24.203354637358224 28.1221070716274 24.331255031352434 39 21.95464587221016 24.77271153282872 29.371725054181354 23.90091754077977 40 23.302079382113387 23.846402618749448 29.186005803488317 23.665512195648844 41 22.039785727129306 24.372014148464846 29.52262591644476 24.065574207961085 42 21.64458431101208 24.717910693375167 29.537334779440123 24.100170216172636 43 21.3855748941629 23.776734073287624 28.8054179445587 26.03227308799077 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1703.0 1 1569.0 2 1435.0 3 2814.5 4 4194.0 5 4194.0 6 4849.5 7 5505.0 8 5790.5 9 6076.0 10 9244.5 11 12413.0 12 12413.0 13 24101.5 14 35790.0 15 57470.0 16 79150.0 17 57718.0 18 36286.0 19 36286.0 20 40651.5 21 45017.0 22 34960.5 23 24904.0 24 29255.5 25 33607.0 26 33607.0 27 39598.0 28 45589.0 29 49518.5 30 53448.0 31 58031.5 32 62615.0 33 62615.0 34 69513.0 35 76411.0 36 86272.0 37 96133.0 38 107486.0 39 118839.0 40 118839.0 41 130784.0 42 142729.0 43 157645.0 44 172561.0 45 195783.5 46 219006.0 47 219006.0 48 242403.0 49 265800.0 50 280512.0 51 295224.0 52 288001.0 53 280778.0 54 280778.0 55 253362.0 56 225946.0 57 212477.5 58 199009.0 59 183868.0 60 168727.0 61 168727.0 62 148383.0 63 128039.0 64 108999.5 65 89960.0 66 75683.0 67 61406.0 68 61406.0 69 52712.5 70 44019.0 71 39140.0 72 34261.0 73 29593.0 74 24925.0 75 24925.0 76 21654.0 77 18383.0 78 15960.0 79 13537.0 80 11007.5 81 8478.0 82 8478.0 83 7222.0 84 5966.0 85 4802.5 86 3639.0 87 3489.0 88 3339.0 89 3339.0 90 2541.5 91 1744.0 92 1235.0 93 726.0 94 525.0 95 324.0 96 324.0 97 203.0 98 82.0 99 60.5 100 39.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3147762.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.73704681061382 #Duplication Level Percentage of deduplicated Percentage of total 1 86.38726652611729 47.28583851681055 2 7.54115723341209 8.255613529829532 3 2.089029171970251 3.430418627246204 4 0.9771003394725987 2.1393434808151315 5 0.5726100517076083 1.5671491602273677 6 0.3966211206902997 1.3025921309581832 7 0.28434612529542963 1.0894987019498816 8 0.22098316199440807 0.9676772545956298 9 0.16857041112172982 0.8304341836009088 >10 1.1508567301265002 12.179384410931446 >50 0.12090290481229461 4.563109353594134 >100 0.0824949122970278 8.778575544371247 >500 0.004987573701587969 1.827800589141716 >1k 0.002841757108837191 2.4963137816567533 >5k 0.0 0.0 >10k+ 2.3198017214997473E-4 3.2862507342712557 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 52013 1.6523803260856444 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19849 0.6305749926455685 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17724 0.5630667121593056 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13935 0.44269547697697603 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3718 0.11811566439902381 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.1768602581770795E-5 0.0 0.0 0.0 0.0 6 3.1768602581770795E-5 0.0 0.0 0.0 0.0 7 3.1768602581770795E-5 0.0 0.0 0.0 0.0 8 3.1768602581770795E-5 0.0 0.0 0.0 0.0 9 3.1768602581770795E-5 0.0 0.0 0.0 0.0 10 3.1768602581770795E-5 0.0 0.0 0.0 0.0 11 1.2707441032708318E-4 0.0 0.0 0.0 0.0 12 1.2707441032708318E-4 0.0 0.0 3.1768602581770795E-5 0.0 13 1.2707441032708318E-4 0.0 0.0 6.353720516354159E-5 0.0 14 1.9061161549062476E-4 0.0 0.0 9.530580774531238E-5 0.0 15 2.2238021807239556E-4 0.0 0.0 2.8591742323593714E-4 0.0 16 2.2238021807239556E-4 0.0 0.0 7.306778593807283E-4 0.0 17 2.2238021807239556E-4 0.0 0.0 0.0010483638851984363 0.0 18 2.5414882065416636E-4 0.0 0.0 0.001238975500689061 0.0 19 3.1768602581770796E-4 0.0 0.0 0.001874347552324477 0.0 20 3.1768602581770796E-4 0.0 0.0 0.0031450916555953085 0.0 21 3.4945462839947874E-4 0.0 0.0 0.0048923647975927026 0.0 22 3.4945462839947874E-4 0.0 0.0 0.00879990291515051 0.0 23 3.4945462839947874E-4 0.0 0.0 0.010610713262311446 3.1768602581770795E-5 24 3.4945462839947874E-4 0.0 0.0 0.014581788585032795 3.1768602581770795E-5 25 3.4945462839947874E-4 0.0 0.0 0.01636083032961196 6.353720516354159E-5 26 3.4945462839947874E-4 0.0 0.0 0.018679938318081228 6.353720516354159E-5 27 3.4945462839947874E-4 0.0 0.0 0.026939774989341633 6.353720516354159E-5 28 3.4945462839947874E-4 0.0 0.0 0.0697320826669869 6.353720516354159E-5 29 3.4945462839947874E-4 0.0 0.0 0.18355898571747165 6.353720516354159E-5 30 3.4945462839947874E-4 0.0 0.0 0.3226419278204642 6.353720516354159E-5 31 3.4945462839947874E-4 0.0 0.0 0.77950620154891 6.353720516354159E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATC 195 0.0 20.871796 22 TACTTAC 1355 0.0 18.841328 31 AGTGTAC 1680 0.0 18.610119 27 CTTATAC 2975 0.0 18.593277 37 TAGTACG 180 0.0 18.5 2 GTACTTA 1490 0.0 17.755033 30 GTGTACT 1610 0.0 17.580746 28 GTACGCC 205 0.0 17.146341 4 ACTTACA 1225 0.0 16.008163 32 TCTATAC 285 0.0 15.578947 3 CTACAGT 2120 0.0 15.533019 23 AGATCGA 240 0.0 15.416666 6 TACCGTT 120 1.9380059E-6 15.416666 18 TGTACTT 1850 0.0 15.3 29 CAGTGTA 2125 0.0 15.061176 26 AACGCAG 22900 0.0 15.03428 5 CAATCGG 320 0.0 15.03125 24 CGCTACG 910 0.0 14.840659 10 AATCGGG 315 0.0 14.682539 25 ACAGTGT 2170 0.0 14.663594 25 >>END_MODULE