##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727343.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8728264 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.071658579529675 33.0 31.0 34.0 30.0 34.0 2 32.221510715074615 33.0 31.0 34.0 30.0 34.0 3 32.298169716223065 34.0 31.0 34.0 30.0 34.0 4 35.88093256574274 37.0 35.0 37.0 35.0 37.0 5 35.766708706336104 37.0 35.0 37.0 35.0 37.0 6 35.78764505748222 37.0 35.0 37.0 35.0 37.0 7 35.73938013332319 37.0 35.0 37.0 35.0 37.0 8 35.71599564357815 37.0 35.0 37.0 33.0 37.0 9 37.42526921733806 39.0 37.0 39.0 35.0 39.0 10 37.262398570895655 39.0 37.0 39.0 34.0 39.0 11 37.37537109326666 39.0 37.0 39.0 34.0 39.0 12 37.27811761880713 39.0 37.0 39.0 34.0 39.0 13 37.3423093068679 39.0 37.0 39.0 34.0 39.0 14 38.475607635149444 40.0 38.0 41.0 34.0 41.0 15 38.45062488943964 40.0 38.0 41.0 34.0 41.0 16 38.37684458215288 40.0 38.0 41.0 34.0 41.0 17 38.35671503520059 40.0 38.0 41.0 34.0 41.0 18 38.31105051359583 40.0 38.0 41.0 34.0 41.0 19 38.3348842335658 40.0 38.0 41.0 34.0 41.0 20 38.215923005995236 40.0 38.0 41.0 34.0 41.0 21 38.13461210614161 40.0 38.0 41.0 33.0 41.0 22 38.062463738493705 40.0 38.0 41.0 33.0 41.0 23 37.953617924480746 40.0 37.0 41.0 33.0 41.0 24 37.83983630650952 40.0 37.0 41.0 33.0 41.0 25 37.760216922861176 40.0 37.0 41.0 32.0 41.0 26 37.40451136675059 39.0 37.0 41.0 32.0 41.0 27 37.18557665075208 39.0 36.0 41.0 31.0 41.0 28 37.01936055096409 39.0 36.0 40.0 31.0 41.0 29 36.970792244597554 39.0 36.0 40.0 31.0 41.0 30 36.888449180730554 39.0 36.0 40.0 30.0 41.0 31 36.66002529254386 39.0 36.0 40.0 30.0 41.0 32 36.54541040463487 39.0 36.0 40.0 30.0 41.0 33 36.36791909593935 39.0 35.0 40.0 30.0 41.0 34 36.218386382446724 39.0 35.0 40.0 29.0 41.0 35 36.05933665617813 39.0 35.0 40.0 29.0 41.0 36 35.88931831117849 38.0 35.0 40.0 27.0 41.0 37 35.660046029771785 38.0 35.0 40.0 27.0 41.0 38 35.549615479091834 38.0 35.0 40.0 26.0 41.0 39 35.37570380547609 38.0 34.0 40.0 25.0 41.0 40 35.242355753675646 38.0 34.0 40.0 25.0 41.0 41 35.091882188714735 38.0 34.0 40.0 24.0 41.0 42 34.89507455319867 38.0 34.0 40.0 24.0 41.0 43 31.615925457800085 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 26.0 11 51.0 12 43.0 13 52.0 14 75.0 15 148.0 16 280.0 17 551.0 18 1072.0 19 2162.0 20 4331.0 21 7948.0 22 14145.0 23 22492.0 24 33854.0 25 48585.0 26 66623.0 27 88597.0 28 114408.0 29 144775.0 30 181898.0 31 227903.0 32 283702.0 33 355185.0 34 455745.0 35 598387.0 36 839632.0 37 1321429.0 38 2329966.0 39 1584189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.530331804812505 19.04275581031921 13.301121505948949 26.125790878919336 2 18.457290017808813 21.97053159711943 34.88803730042996 24.6841410846418 3 18.277930181763523 22.569195890500104 31.690792120861605 27.46208180687477 4 14.475272516963281 16.076644794428766 34.048557651326774 35.39952503728118 5 14.03101464392003 37.945243177795724 34.13470307497574 13.889039103308514 6 35.13192314072993 36.25842435563361 14.260418795765114 14.349233707871347 7 29.315600444716157 31.91400947542375 20.229406443251488 18.54098363660861 8 27.92599994683937 35.63643354508984 18.713503624546647 17.724062883524148 9 27.525462107928906 13.61991342150054 18.295035530547654 40.55958894002289 10 15.32198155326191 28.495849804726348 33.54465446966316 22.63751417234859 11 37.087455191547825 21.431455327199085 21.095764289439458 20.38532519181363 12 21.343511149525266 25.927801908833185 29.925950910742387 22.80273603089916 13 31.96981667832229 19.9427973306032 23.58740523888828 24.499980752186232 14 21.92036125396757 20.682234176234815 26.49640295023157 30.901001619566042 15 25.627937010154593 28.652765315072966 21.824775235946117 23.894522438826325 16 24.009791637833136 26.674743110428373 24.52381137875756 24.791653872980927 17 24.200860560587994 26.391078455005484 25.33880735046511 24.06925363394141 18 23.899666646196767 26.03820186923769 26.024785684759305 24.03734579980624 19 25.45470668623222 25.5577054039612 26.23690117530817 22.75068673449841 20 24.46220691766427 25.436673317855647 26.01620436778723 24.08491539669286 21 24.218584589100423 25.823920999639792 26.533145651873042 23.424348759386746 22 24.9413285391001 25.270053701400414 25.468592609022828 24.32002515047666 23 24.037907194374505 25.57612831142596 25.999247960419165 24.386716533780373 24 23.704942930232175 25.364860641245496 26.277046615455262 24.653149813067067 25 24.1800545904661 24.960553438805242 26.03839663878178 24.82099533194688 26 23.71429186834862 25.345211831356156 26.504182274963267 24.436314025331956 27 24.59799566099284 25.736400732150173 25.836477906717764 23.829125700139226 28 23.825654219441574 26.200742782298974 25.643804999482146 24.329797998777305 29 23.93686762911846 26.22238511575727 26.080042950121584 23.76070430500269 30 24.62222728368436 25.908565552096043 25.510364947714688 23.95884221650491 31 24.114268312690818 25.213937158637734 26.2489539729779 24.422840555693547 32 23.60055791163054 25.86154589274568 26.001092542572042 24.53680365305174 33 23.836801911582874 24.97080748245012 26.25054650042666 24.941844105540344 34 24.069345290197454 25.187494328769155 26.93783093636948 23.80532944466391 35 23.996902476827007 25.10424753421757 26.469238327346652 24.429611661608767 36 23.58466700823898 24.739134838267955 27.12400770645801 24.55219044703506 37 23.279783929542003 24.596322934320046 27.31445794948457 24.809435186653385 38 23.331226003246464 24.159179878152173 27.60267104661362 24.90692307198774 39 22.69827081307348 24.20775769385527 28.460550689117557 24.633420803953683 40 23.257396889003356 23.727032087938678 28.610672179484947 24.404898843573015 41 22.522806367910047 23.928756050458603 29.00048623643831 24.54795134519304 42 22.056585364512348 24.135372165644853 29.02011213226364 24.787930337579155 43 21.9473425643404 23.271706721978163 28.74415805938042 26.036792654301017 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2058.0 1 1940.0 2 1822.0 3 3813.0 4 5804.0 5 5804.0 6 6642.5 7 7481.0 8 8063.0 9 8645.0 10 12611.0 11 16577.0 12 16577.0 13 30277.0 14 43977.0 15 71704.5 16 99432.0 17 77327.5 18 55223.0 19 55223.0 20 64714.5 21 74206.0 22 68328.0 23 62450.0 24 75378.0 25 88306.0 26 88306.0 27 106511.0 28 124716.0 29 142853.0 30 160990.0 31 185445.0 32 209900.0 33 209900.0 34 237996.5 35 266093.0 36 300153.0 37 334213.0 38 371704.5 39 409196.0 40 409196.0 41 450028.0 42 490860.0 43 529896.5 44 568933.0 45 615464.0 46 661995.0 47 661995.0 48 704352.5 49 746710.0 50 766359.0 51 786008.0 52 768763.0 53 751518.0 54 751518.0 55 705446.5 56 659375.0 57 611065.5 58 562756.0 59 508951.5 60 455147.0 61 455147.0 62 399003.0 63 342859.0 64 294443.5 65 246028.0 66 205220.5 67 164413.0 68 164413.0 69 135870.0 70 107327.0 71 90146.0 72 72965.0 73 61021.5 74 49078.0 75 49078.0 76 41426.5 77 33775.0 78 28264.5 79 22754.0 80 18130.5 81 13507.0 82 13507.0 83 11052.5 84 8598.0 85 6878.0 86 5158.0 87 4538.5 88 3919.0 89 3919.0 90 3000.0 91 2081.0 92 1457.0 93 833.0 94 615.0 95 397.0 96 397.0 97 256.5 98 116.0 99 90.5 100 65.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8728264.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.7265350520725 #Duplication Level Percentage of deduplicated Percentage of total 1 82.32633409563299 44.23108674497656 2 9.144763490145118 9.82632912392389 3 3.0231778064274875 4.872746051570221 4 1.4386484622615432 3.0917438814122002 5 0.8626701213919006 2.317413825766879 6 0.5783669408007055 1.8644191030733428 7 0.395519069500183 1.4874908405885279 8 0.3062197679414211 1.3161701676753812 9 0.2343633776783689 1.1332379003183093 >10 1.4853919754707563 15.206840174660078 >50 0.13569348577217838 5.057656224043005 >100 0.06498978224782563 6.1969371720919115 >500 0.002645856038180853 0.9663994226025726 >1k 0.0011304516157382377 0.9567748731835407 >5k 0.0 0.0 >10k+ 8.531707580692408E-5 1.4747544941136044 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 64132 0.7347623765733942 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25286 0.2897025112897593 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20019 0.22935832371706447 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19256 0.2206166082969076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1457032005448048E-5 2 0.0 0.0 0.0 1.1457032005448048E-5 1.1457032005448048E-5 3 0.0 0.0 0.0 1.1457032005448048E-5 1.1457032005448048E-5 4 0.0 0.0 0.0 1.1457032005448048E-5 1.1457032005448048E-5 5 0.0 2.2914064010896096E-5 0.0 1.1457032005448048E-5 1.1457032005448048E-5 6 0.0 2.2914064010896096E-5 0.0 1.1457032005448048E-5 4.582812802179219E-5 7 0.0 2.2914064010896096E-5 0.0 1.1457032005448048E-5 4.582812802179219E-5 8 0.0 2.2914064010896096E-5 0.0 1.1457032005448048E-5 8.019922403813633E-5 9 0.0 2.2914064010896096E-5 0.0 2.2914064010896096E-5 9.165625604358438E-5 10 0.0 2.2914064010896096E-5 0.0 6.874219203268828E-5 1.0311328804903243E-4 11 5.7285160027240236E-5 2.2914064010896096E-5 0.0 9.165625604358438E-5 1.0311328804903243E-4 12 5.7285160027240236E-5 3.437109601634414E-5 0.0 1.0311328804903243E-4 1.0311328804903243E-4 13 5.7285160027240236E-5 3.437109601634414E-5 0.0 1.0311328804903243E-4 1.0311328804903243E-4 14 9.165625604358438E-5 4.582812802179219E-5 0.0 1.489414160708246E-4 1.6039844807627266E-4 15 1.0311328804903243E-4 4.582812802179219E-5 0.0 2.1768360810351292E-4 1.7185548008172072E-4 16 1.0311328804903243E-4 4.582812802179219E-5 0.0 4.3536721620702584E-4 2.1768360810351292E-4 17 1.0311328804903243E-4 4.582812802179219E-5 0.0 6.186797282941946E-4 2.1768360810351292E-4 18 1.0311328804903243E-4 5.7285160027240236E-5 0.0 6.874219203268829E-4 2.1768360810351292E-4 19 1.0311328804903243E-4 5.7285160027240236E-5 0.0 9.62390688457636E-4 2.2914064010896095E-4 20 1.1457032005448047E-4 6.874219203268828E-5 0.0 0.0015352422887300384 2.2914064010896095E-4 21 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.0024747189131767784 2.40597672114409E-4 22 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.004135988553966745 2.40597672114409E-4 23 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.005041094082397141 2.749687681307531E-4 24 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.0065419652751108354 2.749687681307531E-4 25 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.007206473131426822 2.864258001362012E-4 26 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.008340719299966179 2.864258001362012E-4 27 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.013954664982635723 2.864258001362012E-4 28 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.04758105391862574 2.864258001362012E-4 29 1.2602735205992854E-4 6.874219203268828E-5 0.0 0.12147891035376565 2.864258001362012E-4 30 1.489414160708246E-4 6.874219203268828E-5 0.0 0.21881785427205228 2.864258001362012E-4 31 1.489414160708246E-4 6.874219203268828E-5 0.0 0.6391763585519411 2.864258001362012E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 6515 0.0 20.388334 37 TAGATCG 320 0.0 16.765625 5 GGTATCA 14585 0.0 16.502228 1 TACTTAC 2370 0.0 16.080168 31 AACGCAG 27910 0.0 16.06073 5 TCTTATA 11505 0.0 15.549326 37 GTACTTA 2625 0.0 15.293334 30 TCGTTAC 1810 0.0 15.127071 23 CGCAGAG 31195 0.0 14.36945 7 ACGCAGA 31625 0.0 14.168222 6 AGTGTAC 3305 0.0 14.049925 27 ATCAACG 31870 0.0 14.01867 2 TCAACGC 32100 0.0 13.964331 3 CAACGCA 32175 0.0 13.93178 4 CGCAATC 545 0.0 13.917431 22 TATCAAC 32095 0.0 13.868516 1 AGAGTAC 32260 0.0 13.814787 10 CAGAGTA 32795 0.0 13.74737 9 TTCGTTA 515 0.0 13.650485 22 GTGTACT 3135 0.0 13.631579 28 >>END_MODULE