##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727342.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7298376 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11462152676157 33.0 31.0 34.0 30.0 34.0 2 32.26832133614382 34.0 31.0 34.0 30.0 34.0 3 32.34860878639303 34.0 31.0 34.0 30.0 34.0 4 35.929897281258185 37.0 35.0 37.0 35.0 37.0 5 35.812656404657695 37.0 35.0 37.0 35.0 37.0 6 35.826320951400696 37.0 35.0 37.0 35.0 37.0 7 35.776189113852176 37.0 35.0 37.0 35.0 37.0 8 35.74235747788275 37.0 35.0 37.0 35.0 37.0 9 37.47251895490175 39.0 37.0 39.0 35.0 39.0 10 37.30795330358425 39.0 37.0 39.0 34.0 39.0 11 37.411594716413624 39.0 37.0 39.0 35.0 39.0 12 37.31411193394256 39.0 37.0 39.0 34.0 39.0 13 37.37315369885027 39.0 37.0 39.0 34.0 39.0 14 38.54885771848422 40.0 38.0 41.0 34.0 41.0 15 38.51290108922862 40.0 38.0 41.0 34.0 41.0 16 38.4403681038083 40.0 38.0 41.0 34.0 41.0 17 38.396312549531565 40.0 38.0 41.0 34.0 41.0 18 38.344507188996566 40.0 38.0 41.0 34.0 41.0 19 38.3498782468867 40.0 38.0 41.0 34.0 41.0 20 38.22855331103796 40.0 38.0 41.0 34.0 41.0 21 38.146586172047044 40.0 38.0 41.0 33.0 41.0 22 38.074464511009026 40.0 38.0 41.0 33.0 41.0 23 37.96269635875159 40.0 37.0 41.0 33.0 41.0 24 37.85341547215435 40.0 37.0 41.0 33.0 41.0 25 37.76865058747316 40.0 37.0 41.0 32.0 41.0 26 37.406017174231636 39.0 37.0 41.0 32.0 41.0 27 37.19554350173244 39.0 37.0 41.0 31.0 41.0 28 37.039945050789385 39.0 36.0 40.0 31.0 41.0 29 37.004762429340445 39.0 36.0 40.0 31.0 41.0 30 36.93299728597157 39.0 36.0 40.0 30.0 41.0 31 36.729096856615776 39.0 36.0 40.0 30.0 41.0 32 36.62686562051613 39.0 36.0 40.0 30.0 41.0 33 36.45331331244101 39.0 36.0 40.0 30.0 41.0 34 36.31681705628759 39.0 35.0 40.0 30.0 41.0 35 36.170107021068794 39.0 35.0 40.0 29.0 41.0 36 36.02300210348165 39.0 35.0 40.0 28.0 41.0 37 35.79514209736522 38.0 35.0 40.0 27.0 41.0 38 35.695745053420104 38.0 35.0 40.0 27.0 41.0 39 35.5339449488489 38.0 35.0 40.0 26.0 41.0 40 35.4121056519971 38.0 34.0 40.0 26.0 41.0 41 35.28577617815251 38.0 34.0 40.0 25.0 41.0 42 35.09906162686055 38.0 34.0 40.0 24.0 41.0 43 31.643166233145564 35.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 14.0 11 18.0 12 29.0 13 26.0 14 53.0 15 89.0 16 194.0 17 361.0 18 773.0 19 1487.0 20 3151.0 21 6199.0 22 10868.0 23 18236.0 24 27588.0 25 39620.0 26 54063.0 27 71544.0 28 92371.0 29 119168.0 30 149924.0 31 186673.0 32 232100.0 33 291956.0 34 374308.0 35 493463.0 36 688178.0 37 1075823.0 38 1967883.0 39 1392215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.326470984777984 18.315499228869545 12.405568033217254 26.95246175313522 2 18.987826880938993 20.65655428002065 34.25381208093417 26.10180675810619 3 18.623101906506324 21.52696709514555 30.60517846710008 29.244752531248047 4 14.966904966255507 15.433501918783026 33.18116249423159 36.41843062072987 5 14.693104328963047 36.686188817895925 34.0244048813051 14.596301971835926 6 36.87381960041522 34.82535018749376 13.928002613184084 14.372827598906934 7 30.68362057531703 30.76729672464121 19.628859899791408 18.920222800250357 8 28.35877460958438 34.809538450745755 18.388803207727307 18.44288373194256 9 27.520286704877904 13.291532253202632 17.58487093567117 41.603310106248294 10 15.765548390491254 27.35879872453817 33.40634957694698 23.46930330802359 11 38.07784087857353 20.571919013216093 20.649333495561205 20.70090661264917 12 22.06240127940791 24.570945645990285 29.406487141797022 23.960165932804777 13 32.27596111792541 19.188707186365843 23.033124081302468 25.502207614406274 14 22.84808291598021 19.594578300706896 24.856981881996763 32.70035690131613 15 26.246962337922845 27.518080734673028 20.882727883573 25.35222904383112 16 25.55705543260583 25.734437359763323 23.247308716350048 25.4611984912808 17 25.14512817646008 25.670847870814 24.284416149565327 24.899607803160592 18 25.055176658478544 25.218706188883665 24.755740181103302 24.97037697153449 19 26.30653723513286 24.890249556887724 24.714100780776434 24.089112427202984 20 25.709883952265542 24.634713256757394 24.517399487228392 25.13800330374867 21 25.46798082203493 24.87558876111617 24.716087524128653 24.940342892720242 22 26.09106464232591 24.45581044330958 24.04963789204612 25.403487022318387 23 25.42268307360432 24.575453498148082 24.38558934206733 25.61627408618027 24 25.281665400631592 24.45206988513609 24.50227283439494 25.763991879837377 25 25.619069228551666 24.073026656889148 24.434531736923393 25.87337237763579 26 25.192618193417278 24.429873166304393 24.792652502419717 25.584856137858615 27 25.773569352962905 24.726267871098994 24.339154354338554 25.161008421599547 28 25.402527904838006 24.93127238169149 24.26442540093851 25.401774312531995 29 25.325017510744857 25.096733848735663 24.51646777310459 25.06178086741489 30 25.74623450477202 24.83257919296019 24.158812864670168 25.262373437597624 31 25.433219664210228 24.31976647955655 24.58479804274266 25.662215813490562 32 25.052354112750564 24.711675583718897 24.548817435550045 25.687152867980494 33 25.176696843242937 24.215551514473905 24.58096157282113 26.02679006946203 34 25.35494197613277 24.16189574228568 25.162323782715497 25.32083849886605 35 25.239327214711878 24.145083783022415 24.973487252506583 25.64210174975912 36 24.99979447482563 23.838727958110134 25.423107825631348 25.738369741432887 37 24.747697295946384 23.558775267264938 25.69426403901361 25.999263397775067 38 24.565656798169893 23.407042881868513 25.952526973123884 26.07477334683771 39 24.188257771317893 23.32695657225662 26.68616963554632 25.798616020879166 40 24.543035327311173 22.972864100177905 26.8724165485582 25.611684023952723 41 23.971510922429868 23.023080751115042 27.233825716844407 25.77158260961069 42 23.56724290444888 23.15278083781926 27.316350925192122 25.96362533253973 43 23.59200183712103 22.320554600091853 27.17756662578086 26.90987693700626 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 240.0 1 329.0 2 418.0 3 1103.5 4 1789.0 5 1789.0 6 2096.5 7 2404.0 8 2498.5 9 2593.0 10 3778.5 11 4964.0 12 4964.0 13 9550.5 14 14137.0 15 23935.5 16 33734.0 17 25972.5 18 18211.0 19 18211.0 20 22108.0 21 26005.0 22 25320.5 23 24636.0 24 31826.0 25 39016.0 26 39016.0 27 49917.0 28 60818.0 29 73625.0 30 86432.0 31 105301.5 32 124171.0 33 124171.0 34 147885.0 35 171599.0 36 202267.5 37 232936.0 38 269550.5 39 306165.0 40 306165.0 41 347138.5 42 388112.0 43 431425.5 44 474739.0 45 520122.5 46 565506.0 47 565506.0 48 607395.5 49 649285.0 50 674041.5 51 698798.0 52 692470.5 53 686143.0 54 686143.0 55 656756.0 56 627369.0 57 587756.5 58 548144.0 59 504131.5 60 460119.0 61 460119.0 62 404395.5 63 348672.0 64 297553.5 65 246435.0 66 205525.5 67 164616.0 68 164616.0 69 135106.0 70 105596.0 71 86927.5 72 68259.0 73 56347.0 74 44435.0 75 44435.0 76 36262.0 77 28089.0 78 23155.5 79 18222.0 80 14504.5 81 10787.0 82 10787.0 83 8639.5 84 6492.0 85 5077.0 86 3662.0 87 3096.0 88 2530.0 89 2530.0 90 1886.0 91 1242.0 92 884.5 93 527.0 94 380.0 95 233.0 96 233.0 97 148.5 98 64.0 99 48.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7298376.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.84482769901599 #Duplication Level Percentage of deduplicated Percentage of total 1 80.89338840598465 45.174773375217896 2 9.759295464472753 10.900123473545381 3 3.30307996004915 5.533797937350521 4 1.6729884493925096 3.737110067950745 5 0.9685398001095685 2.704396912837912 6 0.6531076717948313 2.1883611240172702 7 0.45436100321215184 1.7761598356274266 8 0.3212687521223138 1.4352958485878793 9 0.25754672968306624 1.2944387469236291 >10 1.5585481570440147 16.178680555890654 >50 0.11610969944707604 4.40818019658075 >100 0.040637359049110484 3.64586156310073 >500 9.077665385634572E-4 0.3363969778071863 >1k 1.226561676545524E-4 0.08666256306684902 >5k 7.35936994533427E-5 0.2926334149830881 >10k+ 2.4531233151114235E-5 0.30712740651214143 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22419 0.3071779256097521 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8238 0.11287442576266282 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.740335658234106E-5 2 0.0 1.370167829117053E-5 0.0 0.0 2.740335658234106E-5 3 0.0 1.370167829117053E-5 0.0 0.0 2.740335658234106E-5 4 0.0 1.370167829117053E-5 0.0 0.0 2.740335658234106E-5 5 0.0 1.370167829117053E-5 0.0 0.0 2.740335658234106E-5 6 0.0 1.370167829117053E-5 0.0 0.0 8.221006974702317E-5 7 0.0 1.370167829117053E-5 0.0 0.0 9.591174803819371E-5 8 1.370167829117053E-5 1.370167829117053E-5 0.0 0.0 9.591174803819371E-5 9 1.370167829117053E-5 1.370167829117053E-5 0.0 0.0 1.5071846120287582E-4 10 5.480671316468212E-5 1.370167829117053E-5 0.0 0.0 1.5071846120287582E-4 11 1.0961342632936424E-4 1.370167829117053E-5 0.0 0.0 1.5071846120287582E-4 12 1.0961342632936424E-4 1.370167829117053E-5 0.0 2.740335658234106E-5 1.5071846120287582E-4 13 1.0961342632936424E-4 1.370167829117053E-5 0.0 2.740335658234106E-5 1.5071846120287582E-4 14 1.2331510462053476E-4 1.370167829117053E-5 0.0 4.1105034873511583E-5 2.4663020924106953E-4 15 1.2331510462053476E-4 4.1105034873511583E-5 0.0 9.591174803819371E-5 2.6033188753224007E-4 16 1.5071846120287582E-4 4.1105034873511583E-5 0.0 2.3292853094989899E-4 3.5624363557043375E-4 17 1.5071846120287582E-4 4.1105034873511583E-5 0.0 4.6585706189979797E-4 3.699453138616043E-4 18 1.5071846120287582E-4 4.1105034873511583E-5 0.0 4.795587401909685E-4 4.1105034873511586E-4 19 1.6442013949404633E-4 4.1105034873511583E-5 0.0 6.165755231026738E-4 4.247520270262864E-4 20 2.1922685265872847E-4 4.1105034873511583E-5 0.0 8.906090889260844E-4 4.5215538360862743E-4 21 2.1922685265872847E-4 4.1105034873511583E-5 0.0 0.0013564661508258823 4.795587401909685E-4 22 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.0025348104838665477 4.795587401909685E-4 23 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.0030143692240575163 5.480671316468211E-4 24 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.004124205165642329 5.480671316468211E-4 25 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.004494150479503934 5.754704882291622E-4 26 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.005288847820391824 6.028738448115033E-4 27 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.009399351307742982 6.028738448115033E-4 28 2.3292853094989899E-4 4.1105034873511583E-5 0.0 0.03351430510020311 6.028738448115033E-4 29 2.3292853094989899E-4 5.480671316468212E-5 0.0 0.0902392532256491 6.028738448115033E-4 30 2.3292853094989899E-4 5.480671316468212E-5 0.0 0.1647763831296168 6.028738448115033E-4 31 2.3292853094989899E-4 5.480671316468212E-5 0.0 0.4683644690270822 6.028738448115033E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 4395 0.0 19.405006 37 TCTTATA 7505 0.0 15.628248 37 GGTATCA 7355 0.0 15.39361 1 TCGTTAC 630 0.0 15.269842 23 AACGCAG 12370 0.0 14.805982 5 TACTTAC 1090 0.0 13.917431 31 CGTATAC 280 0.0 13.875001 3 CGTTACG 585 0.0 13.59829 24 ACGCAGA 13875 0.0 13.240002 6 TATACCG 410 0.0 13.085366 5 CTCGTTA 740 0.0 13.0 22 TATACTG 1030 0.0 12.932038 5 GTACTTA 1245 0.0 12.927711 30 AGAGTAC 14150 0.0 12.891167 10 ATACCCG 230 5.7661964E-10 12.869565 5 CGCAGAG 14425 0.0 12.837782 7 CAACGCA 14265 0.0 12.826148 4 TCAACGC 14280 0.0 12.825631 3 ATCAACG 14210 0.0 12.784659 2 CAGAGTA 14765 0.0 12.554691 9 >>END_MODULE